Re: [OctDev] R: undefined symbol: _ZN3MPI3Win4FreeEv executing MPI_Init of openmpi_ext

2010-02-11 Thread Eduardo Díaz Díaz
Hello Riccardo, I recompiled again the openmpi1.3.3 with the configure option -lmpi_cxx and openmpi_ext and in my mpiCC apper the option, but not in the mkoctfile mpiCC --showme c...@hpcmaster:~$ mpiCC --showme g++ -I/home/csi/openmpi-1.3.3/include -pthread -L/home/csi/openmpi-1.3.3/lib -lmpi

Re: [OctDev] R: undefined symbol: _ZN3MPI3Win4FreeEv executing MPI_Init of openmpi_ext

2010-02-10 Thread Riccardo Corradini
I think there is someting wrong with the whole set of mpi libs Infact mine is different mkoctfile -s -I/home/corradin/openmpi-1.3.3/include  -lpthread -L/home/corradin/openmpi-1.3.3/lib -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil -lm -ldl Because this is my output of mpiCC --showme g

Re: [OctDev] R: undefined symbol: _ZN3MPI3Win4FreeEv executing MPI_Init of openmpi_ext

2010-02-10 Thread Eduardo Díaz Díaz
Thanks Riccardo, I recompiled openmpi-1.3.3 again with this: ./configure --enable-mpirun-prefix-by-default --prefix=$HOME/openmpi-1.3.3/ --enable-static nevertheless there are something wrong with warnings: (..) configure: WARNING: Unrecognized options: --enable-mpirun-prefix-by-default, --e

[OctDev] R: undefined symbol: _ZN3MPI3Win4FreeEv executing MPI_Init of openmpi_ext

2010-02-10 Thread Riccardo Corradini
Hi Eduardo, have a look at http://octave.svn.sourceforge.net/viewvc/octave/trunk/octave-forge/extra/openmpi_ext/doc/README?revision=6476&view=markup If you dot include all the mpi libs required you will have this type of problem Also if the problem persists try to recompile openmpi1.3.3 from sourc