Re: [OpenBabel-Devel] Stereochemistry check using InChIKey

2019-06-25 Thread Noel O'Boyle
If you use canonical SMILES instead of the InChI to evaluate changes in stereo, do the results change? If you use canonical SMILES, you will also be able to manually verify what's different. - Noel On Fri, 21 Jun 2019 at 09:05, Naruki Yoshikawa wrote: > Hi all, > > I've been developing a new di

[OpenBabel-Devel] Stereochemistry check using InChIKey

2019-06-21 Thread Naruki Yoshikawa
Hi all, I've been developing a new distance geometry method these days. https://github.com/openbabel/openbabel/pull/1875 I generated SMILES from experimental structures and predict a 3D structure from the SMILES. I compare InChIKey of experimental structure and predicted structure to evaluate ste