Looking at the error message it looks like you could solve the problem by
installing Swig. However, there might be easier ways to do it. It looks like
you installed OpenBabel through Homebrew on a Mac, is that right? If so, did
you specify "--with-python", that is run the command as "brew instal
Thank you David!
I have also tried installing openbabel, but I get the following error:
$> pip install openbabel
Collecting openbabel
Downloading openbabel-2.4.1.tar.gz (74kB)
100% || 81kB 1.1MB/s
Installing collected packages: openbabel
Running setup.py i
Quoting from Matt Swain a couple weeks ago:
> pip install pybel is not correct. That's an unrelated package. Instead, do
> pip install openbabel
-David
> On Mar 9, 2017, at 8:29 AM, Quim Aguirre wrote:
>
> Hello,
>
> I am new at using Open Babel software. My intention is to use "Pybel" to
Hello,
I am new at using Open Babel software. My intention is to use "Pybel" to
calculate structural similarity.
First, I have installed Pybel for Python 3 this way:
$> pip3 install pybel
However, I cannot use the function "readstring":
$> python3
>>> import pybel
>>> smiles = ['', 'CCCN']
