Hi - great question.
The answer is as always; it depends. The query below (similar to yours) will
work also.
What you have to consider when building AQLs is repeatable structures to make
sure you hit the right instance. For this use-case I guess you would like any
EHR which has a Calcium result. Thus you don’t care about which result is
Calcium. But if you wanted to get the excact CLUSTER with Calcium combined with
i.e. HISTORY.time you have to be a bit careful.
SELECT
e
FROM
EHR e
CONTAINS COMPOSITION c
CONTAINS OBSERVATION o[openEHR-EHR-OBSERVATION.laboratory_test.v1]
CONTAINS CLUSTER
c2[openEHR-EHR-CLUSTER.laboratory_test_panel.v1]
WHERE
c2/items[at0002]/items[at0001]/value/magnitude > 123
ORDER BY
o/data[at0001]/events[at0002]/time DESC
LIMIT 10
An even simpler AQL if you want any CLUSTER of a specific type is to only query
for Composition with the CLUSTER. Like this:
SELECT
e
FROM
EHR e
CONTAINS COMPOSITION c
CONTAINS CLUSTER c2[openEHR-EHR-CLUSTER.laboratory_test_panel.v1]
LIMIT 10
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-Original Message-
From: openEHR-technical On Behalf
Of Georg Fette
Sent: torsdag 25. april 2019 14:18
To: For openEHR technical discussions
Subject: AQL questions
Hello,
I have some problems concerning the formulation of an AQL query.
I would like to check a laboratory analyte within a laboratory test. The
analyte should have "Calcium" as analyte name and I would like to receive all
EHRs that contain the analyte as the query result.
The SELECT part seems easy, as I just want the EHRs, so this looks like
this:
SELECT e
A problem I now have is about the nesting of the Archetypes. As the test is an
OBSERVATION and an EHR contains only COMPOSITIONs, I wonder if I have to
include a COMPOSITION in order to reach the tests. This would lead to a FROM
part looking like this:
FROM EHR e
CONTAINS COMPOSITION
CONTAINS OBSERVATION
b[openEHR-EHR-OBSERVATION.laboratory_test_result.v1]
The next problem I have is about the definition of the containment of the
analyte in the FROM part or better in the WHERE part. The FROM part would
require me to define the actual nesting structure of the test-OBSERVATION up to
the analyte-CLUSTER. This would look like this:
FROM EHR e
CONTAINS COMPOSITION
CONTAINS OBSERVATION
b[openEHR-EHR-OBSERVATION.laboratory_test_result.v1]
CONTAINS HISTORY
CONTAINS EVENT
CONTAINS ITEM_TREE
CONTAINS CLUSTER
c[openEHR-EHR-CLUSTER.laboratory_test_analyte.v1]
This looks a bit bloated, so I think this should rather be moved to the WHERE
part, which would look like this:
FROM EHR e
CONTAINS COMPOSITION
CONTAINS OBSERVATION
b[openEHR-EHR-OBSERVATION.laboratory_test_result.v1]
WHERE
b/data[at0001]/events[at0002]/data[at0003]/items[at0097]/items[at0024].value
= 'Calcium'
In this WHERE path I am wondering about the necessity of the path part
predicates (i.e. the [at...] parts). Are these predicates always necessary for
every path part ? Or are they only necessary when the path part object would be
ambiguous without the predicate (e.g. in the items of CLUSTERs or ITEM_LISTs) ?
Furthermore I wonder about the namespace from which the predicates are taken
from. For the first part of the WHERE until the archetype slot is reached (i.e.
b/data[at0001]/events[at0002]/data[at0003]/items[at0097])
the predicates are from the laboratory_test_result archetype. For the rest of
the path (i.e. /items[at0024].value) the predicates are taken from the
laboratory_test_analyte archetype. This switching of namespaces seems wrong, so
I think I still have some misunderstanding of AQL concerning the predicates.
How would the correct query/queries look like ? Are there multiple valid
alternatives to express my query using combinations of the approaches scetched
above ?
Greetings
Georg
--
-
Dipl.-Inf. Georg Fette Raum: B001
Universität WürzburgTel.: +49-(0)931-31-85516
Am Hubland Fax.: +49-(0)931-31-86732
97074 Würzburg mail: georg.fe...@uni-wuerzburg.de
-
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