commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2020-08-15 21:12:40 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.3399 (New) Package is "python-scipy" Sat Aug 15 21:12:40 2020 rev:42 rq:826319 version:1.5.2 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2020-03-27 00:27:09.780313504 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.3399/python-scipy.changes 2020-08-15 21:12:53.015368761 +0200 @@ -1,0 +2,11 @@ +Thu Aug 13 07:23:03 UTC 2020 - Marketa Calabkova + +- Update to 1.5.2 + * wrappers for more than a dozen new LAPACK routines are now available in scipy.linalg.lapack + * Improved support for leveraging 64-bit integer size from linear algebra backends + * addition of the probability distribution for two-sided one-sample Kolmogorov-Smirnov tests + * see upstream changelog for more detailed info +- Drop breaking patch no_implicit_decl.patch + * the problem is with lapacke + +--- Old: no_implicit_decl.patch scipy-1.4.1.tar.gz New: scipy-1.5.2.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.vDBgcc/_old 2020-08-15 21:12:58.571371870 +0200 +++ /var/tmp/diff_new_pack.vDBgcc/_new 2020-08-15 21:12:58.571371870 +0200 @@ -18,7 +18,7 @@ %global flavor @BUILD_FLAVOR@%{nil} -%define _ver 1_4_1 +%define _ver 1_5_2 %define shortname scipy %define pname python-%{shortname} @@ -86,7 +86,7 @@ %define skip_python2 1 Name: %{package_name} -Version:1.4.1 +Version:1.5.2 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later @@ -94,8 +94,6 @@ URL:http://www.scipy.org Source0: https://files.pythonhosted.org/packages/source/s/scipy/scipy-%{version}.tar.gz Source100: python-scipy-rpmlintrc -# PATCH-FIX-OPENSUSE - no_implicit_decl.patch - Fix implicit-pointer-decl warnings and implicit-fortify-decl error -Patch0: no_implicit_decl.patch BuildRequires: %{python_module Cython >= 0.19} BuildRequires: %{python_module devel >= 3.5} BuildRequires: %{python_module pybind11 >= 2.2.4} @@ -114,7 +112,6 @@ BuildRequires: lapack-devel %endif BuildRequires: %{python_module numpy-devel >= 1.5.1} -BuildRequires: lapacke-devel Requires: python-numpy >= 1.5.1 Requires: python-pybind11 >= 2.2.4 %else @@ -140,12 +137,10 @@ %prep %setup -q -n scipy-%{version} -%patch0 -p1 find . -type f -name "*.py" -exec sed -i "s|#!%{_bindir}/env python||" {} \; %build %{python_expand # -export FFLAGS="-std=legacy" %if %{with hpc} py_ver=%{$python_version} %hpc_setup ++ scipy-1.4.1.tar.gz -> scipy-1.5.2.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-1.4.1.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new.3399/scipy-1.5.2.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2020-03-27 00:27:07 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.3160 (New) Package is "python-scipy" Fri Mar 27 00:27:07 2020 rev:41 rq:786340 version:1.4.1 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2020-01-16 18:16:37.900818379 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.3160/python-scipy.changes 2020-03-27 00:27:09.780313504 +0100 @@ -1,0 +2,13 @@ +Thu Mar 19 08:05:49 UTC 2020 - Martin Liška + +- Add -std=legacy in order to build with GCC10: + https://gcc.gnu.org/gcc-10/porting_to.html#argument-mismatch + +--- +Mon Mar 16 13:51:18 UTC 2020 - Egbert Eich + +- 'umpfack' is a runtime dependency of scipy. No build time + dependency to suitesparse is required (jsc#SLE-11732). +- Get rid of site.cfg entirely as it is used nowhwere in scipy. + +--- Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.94F5jN/_old 2020-03-27 00:27:10.736313988 +0100 +++ /var/tmp/diff_new_pack.94F5jN/_new 2020-03-27 00:27:10.740313990 +0100 @@ -84,11 +84,6 @@ %define p_bindir %hpc_bindir %endif -%if 0%{?is_opensuse} == 0 - %bcond_with suitesparse -%else - %bcond_without suitesparse -%endif %define skip_python2 1 Name: %{package_name} Version:1.4.1 @@ -108,9 +103,6 @@ BuildRequires: %{python_module setuptools} BuildRequires: fdupes BuildRequires: python-rpm-macros -%if %{with suitesparse} -BuildRequires: suitesparse-devel-static -%endif BuildRequires: swig %if %{without hpc} BuildRequires: gcc-c++ @@ -151,32 +143,15 @@ %patch0 -p1 find . -type f -name "*.py" -exec sed -i "s|#!%{_bindir}/env python||" {} \; -cat > site.cfg << EOF -[amd] -library_dirs = %{_libdir} -include_dirs = %{_includedir}/suitesparse:%{_includedir}/ufsparse -amd_libs = amd - -[umfpack] -library_dirs = %{_libdir} -include_dirs = %{_includedir}/suitesparse:%{_includedir}/ufsparse -umfpack_libs = umfpack -EOF - %build %{python_expand # +export FFLAGS="-std=legacy" %if %{with hpc} py_ver=%{$python_version} %hpc_setup module load python${py_ver/.*/}-numpy export CFLAGS="$(pkg-config --cflags openblas) %{optflags} -fno-strict-aliasing" LIBS="$(pkg-config --libs openblas)" export OPENBLAS=$OPENBLAS_LIB -cat > site.cfg <
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2020-01-16 18:16:34 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.26092 (New) Package is "python-scipy" Thu Jan 16 18:16:34 2020 rev:40 rq:764663 version:1.4.1 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-12-23 22:39:34.041875585 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.26092/python-scipy.changes 2020-01-16 18:16:37.900818379 +0100 @@ -1,0 +2,5 @@ +Wed Jan 15 12:56:20 UTC 2020 - Tomáš Chvátal + +- Fix pybind11 devel dependency to match real name + +--- Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.oHu0D4/_old 2020-01-16 18:16:39.092819054 +0100 +++ /var/tmp/diff_new_pack.oHu0D4/_new 2020-01-16 18:16:39.092819054 +0100 @@ -1,7 +1,7 @@ # # spec file for package python-scipy # -# Copyright (c) 2019 SUSE LINUX GmbH, Nuernberg, Germany. +# Copyright (c) 2020 SUSE LLC # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -96,7 +96,7 @@ Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later Group: Development/Libraries/Python -Url:http://www.scipy.org +URL:http://www.scipy.org Source0: https://files.pythonhosted.org/packages/source/s/scipy/scipy-%{version}.tar.gz Source100: python-scipy-rpmlintrc # PATCH-FIX-OPENSUSE - no_implicit_decl.patch - Fix implicit-pointer-decl warnings and implicit-fortify-decl error @@ -104,7 +104,7 @@ BuildRequires: %{python_module Cython >= 0.19} BuildRequires: %{python_module devel >= 3.5} BuildRequires: %{python_module pybind11 >= 2.2.4} -BuildRequires: %{python_module python-pybind11-devel >= 2.2.4} +BuildRequires: %{python_module pybind11-devel >= 2.2.4} BuildRequires: %{python_module setuptools} BuildRequires: fdupes BuildRequires: python-rpm-macros
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-12-23 22:36:58 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.6675 (New) Package is "python-scipy" Mon Dec 23 22:36:58 2019 rev:39 rq:758366 version:1.4.1 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-11-24 23:48:25.812019116 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.6675/python-scipy.changes 2019-12-23 22:39:34.041875585 +0100 @@ -1,0 +2,259 @@ +Fri Dec 20 01:27:36 UTC 2019 - Todd R + +- Update to 1.4.1 + * SciPy 1.4.1 is a bug-fix release with no new features compared +to 1.4.0. Importantly, it aims to fix a problem where an older +version of pybind11 may cause a segmentation fault when +imported alongside incompatible libraries. + +--- +Tue Dec 17 20:48:57 UTC 2019 - Todd R + +- Update to 1.4.0 + + Highlights of this release +* a new submodule, `scipy.fft`, now supersedes `scipy.fftpack`; this + means support for ``long double`` transforms, faster multi-dimensional + transforms, improved algorithm time complexity, release of the global + intepreter lock, and control over threading behavior +* support for ``pydata/sparse`` arrays in `scipy.sparse.linalg` +* substantial improvement to the documentation and functionality of + several `scipy.special` functions, and some new additions +* the generalized inverse Gaussian distribution has been added to + `scipy.stats` +* an implementation of the Edmonds-Karp algorithm in + `scipy.sparse.csgraph.maximum_flow` +* `scipy.spatial.SphericalVoronoi` now supports n-dimensional input, + has linear memory complexity, improved performance, and + supports single-hemisphere generators + + New features +> Infrastructure + * Documentation can now be built with ``runtests.py --doc`` + * A ``Dockerfile`` is now available in the ``scipy/scipy-dev`` repository to +acilitate getting started with SciPy development. +> `scipy.constants` improvements + * `scipy.constants` has been updated with the CODATA 2018 constants. +> `scipy.fft` added + * `scipy.fft` is a new submodule that supersedes the `scipy.fftpack` submodule. +or the most part, this is a drop-in replacement for ``numpy.fft`` and +scipy.fftpack` alike. With some important differences, `scipy.fft`: + * uses NumPy's conventions for real transforms (``rfft``). This means the +eturn value is a complex array, half the size of the full ``fft`` output. +his is different from the output of ``fftpack`` which returned a real array +epresenting complex components packed together. + * the inverse real to real transforms (``idct`` and ``idst``) are normalized +or ``norm=None`` in thesame way as ``ifft``. This means the identity +`idct(dct(x)) == x`` is now ``True`` for all norm modes. + * does not include the convolutions or pseudo-differential operators +rom ``fftpack``. + * This submodule is based on the ``pypocketfft`` library, developed by the +uthor of ``pocketfft`` which was recently adopted by NumPy as well. +`pypocketfft`` offers a number of advantages over fortran ``FFTPACK``: + * support for long double (``np.longfloat``) precision transforms. + * faster multi-dimensional transforms using vectorisation + * Bluestein’s algorithm removes the worst-case ``O(n^2)`` complexity of +`FFTPACK`` + * the global interpreter lock (``GIL``) is released during transforms + * optional multithreading of multi-dimensional transforms via the ``workers`` +rgument + * Note that `scipy.fftpack` has not been deprecated and will continue to be +aintained but is now considered legacy. New code is recommended to use +scipy.fft` instead, where possible. +> `scipy.fftpack` improvements + * `scipy.fftpack` now uses pypocketfft to perform its FFTs, offering the same +peed and accuracy benefits listed for scipy.fft above but without the +mproved API. +> `scipy.integrate` improvements + * The function `scipy.integrate.solve_ivp` now has an ``args`` argument. +his allows the user-defined functions passed to the function to have +dditional parameters without having to create wrapper functions or +ambda expressions for them. + * `scipy.integrate.solve_ivp` can now return a ``y_events`` attribute +epresenting the solution of the ODE at event times + * New ``OdeSolver`` is implemented --- ``DOP853``. This is a high-order explicit +
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-11-24 23:48:21 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.26869 (New) Package is "python-scipy" Sun Nov 24 23:48:21 2019 rev:38 rq:749751 version:1.3.2 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-08-19 20:48:14.129087580 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.26869/python-scipy.changes 2019-11-24 23:48:25.812019116 +0100 @@ -1,0 +2,16 @@ +Tue Nov 19 20:08:41 UTC 2019 - Todd R + +- Update to 1.3.2 + * Bug in unique_roots in scipy.signal.signaltools.py for roots... + * Optimizers reporting success when the minimum is NaN + * ValueError raised if scipy.sparse.linalg.expm recieves array... + * linprog(method='revised simplex') doctest bug + * Graph shortest path with Floyd-Warshall removes explicit zeros. + * BUG: stats: Formula for the variance of the noncentral F distribution... + * BUG: Assignation issues in csr_matrix with fancy indexing + * root_scalar fails when passed a function wrapped with functools.lru_cache + * CI: travis osx build failure + * macOS build failure in SuperLU on maintenance/1.3.x + * Typo in sp.stats.wilcoxon docstring + +--- Old: scipy-1.3.1.tar.gz New: scipy-1.3.2.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.lEouqU/_old 2019-11-24 23:48:31.720018774 +0100 +++ /var/tmp/diff_new_pack.lEouqU/_new 2019-11-24 23:48:31.724018774 +0100 @@ -18,7 +18,7 @@ %global flavor @BUILD_FLAVOR@%{nil} -%define _ver 1_3_1 +%define _ver 1_3_2 %define shortname scipy %define pname python-%{shortname} @@ -91,7 +91,7 @@ %endif %define skip_python2 1 Name: %{package_name} -Version:1.3.1 +Version:1.3.2 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later ++ scipy-1.3.1.tar.gz -> scipy-1.3.2.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-1.3.1.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new.26869/scipy-1.3.2.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-08-19 20:48:11 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.22127 (New) Package is "python-scipy" Mon Aug 19 20:48:11 2019 rev:37 rq:724129 version:1.3.1 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-05-20 13:16:53.627961573 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.22127/python-scipy.changes 2019-08-19 20:48:14.129087580 +0200 @@ -1,0 +2,19 @@ +Fri Aug 16 15:00:19 UTC 2019 - Todd R + +- Update to 1.3.1 + * BUG: Empty data handling of (c)KDTrees + * lsoda fails to detect stiff problem when called from solve_ivp + * sparse matrices indexing with scipy 1.3 + * Exception in loadarff with quoted nominal attributes in scipy... + * DOC/REL: Some sections of the release notes are not nested correctly. + * BUG: optimize: `linprog` failing TestLinprogSimplexBland::test_unbounded_below_no_presolve_corrected + * TST: Travis CI fails (with pytest 5.0 ?) + * CircleCI doc build failing on new warnings + * Scipy 1.3.0 build broken in AIX + * BUG: scipy.spatial.HalfspaceIntersection works incorrectly + * BUG: cKDTree GIL handling is incorrect + * TST: master branch CI failures + * BUG: ckdtree query_ball_point errors on discontiguous input + * BUG: No warning on PchipInterpolator changing from bernstein base to local power base + +--- Old: scipy-1.3.0.tar.gz New: scipy-1.3.1.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.14e7h7/_old 2019-08-19 20:48:16.561087059 +0200 +++ /var/tmp/diff_new_pack.14e7h7/_new 2019-08-19 20:48:16.733087022 +0200 @@ -18,7 +18,7 @@ %global flavor @BUILD_FLAVOR@%{nil} -%define _ver 1_3_0 +%define _ver 1_3_1 %define shortname scipy %define pname python-%{shortname} @@ -91,7 +91,7 @@ %endif %define skip_python2 1 Name: %{package_name} -Version:1.3.0 +Version:1.3.1 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later ++ scipy-1.3.0.tar.gz -> scipy-1.3.1.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-1.3.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new.22127/scipy-1.3.1.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-05-20 13:16:48 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.5148 (New) Package is "python-scipy" Mon May 20 13:16:48 2019 rev:36 rq:703999 version:1.3.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-04-04 14:12:26.405299889 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.5148/python-scipy.changes 2019-05-20 13:16:53.627961573 +0200 @@ -1,0 +2,161 @@ +Sun May 19 02:47:42 UTC 2019 - Todd R + +- Update to 1.3.0 + + Highlights of this release +* Three new ``stats`` functions, a rewrite of ``pearsonr``, and an exact + computation of the Kolmogorov-Smirnov two-sample test +* A new Cython API for bounded scalar-function root-finders in `scipy.optimize` +* Substantial ``CSR`` and ``CSC`` sparse matrix indexing performance + improvements +* Added support for interpolation of rotations with continuous angular + rate and acceleration in ``RotationSpline`` + + New features +> `scipy.interpolate` improvements + * A new class ``CubicHermiteSpline`` is introduced. It is a piecewise-cubic +interpolator which matches observed values and first derivatives. Existing +cubic interpolators ``CubicSpline``, ``PchipInterpolator`` and +``Akima1DInterpolator`` were made subclasses of ``CubicHermiteSpline``. +> `scipy.io` improvements + * For the Attribute-Relation File Format (ARFF) `scipy.io.arff.loadarff` +now supports relational attributes. + * `scipy.io.mmread` can now parse Matrix Market format files with empty lines. +> `scipy.linalg` improvements + * Added wrappers for ``?syconv`` routines, which convert a symmetric matrix +given by a triangular matrix factorization into two matrices and vice versa. + * `scipy.linalg.clarkson_woodruff_transform` now uses an algorithm that leverages +sparsity. This may provide a 60-90 percent speedup for dense input matrices. +Truly sparse input matrices should also benefit from the improved sketch +algorithm, which now correctly runs in ``O(nnz(A))`` time. + * Added new functions to calculate symmetric Fiedler matrices and +Fiedler companion matrices, named `scipy.linalg.fiedler` and +`scipy.linalg.fiedler_companion`, respectively. These may be used +for root finding. +> `scipy.ndimage` improvements + * Gaussian filter performances may improve by an order of magnitude in +some cases, thanks to removal of a dependence on ``np.polynomial``. This +may impact `scipy.ndimage.gaussian_filter` for example. +> `scipy.optimize` improvements + * The `scipy.optimize.brute` minimizer obtained a new keyword ``workers``, which +can be used to parallelize computation. + * A Cython API for bounded scalar-function root-finders in `scipy.optimize` +is available in a new module `scipy.optimize.cython_optimize` via ``cimport``. +This API may be used with ``nogil`` and ``prange`` to loop +over an array of function arguments to solve for an array of roots more +quickly than with pure Python. + * ``'interior-point'`` is now the default method for ``linprog``, and +``'interior-point'`` now uses SuiteSparse for sparse problems when the +required scikits (scikit-umfpack and scikit-sparse) are available. +On benchmark problems (gh-10026), execution time reductions by factors of 2-3 +were typical. Also, a new ``method='revised simplex'`` has been added. +It is not as fast or robust as ``method='interior-point'``, but it is a faster, +more robust, and equally accurate substitute for the legacy +``method='simplex'``. + * ``differential_evolution`` can now use a ``Bounds`` class to specify the +bounds for the optimizing argument of a function. + * `scipy.optimize.dual_annealing` performance improvements related to +vectorisation of some internal code. +> `scipy.signal` improvements + * Two additional methods of discretization are now supported by +`scipy.signal.cont2discrete`: ``impulse`` and ``foh``. + * `scipy.signal.firls` now uses faster solvers + * `scipy.signal.detrend` now has a lower physical memory footprint in some +cases, which may be leveraged using the new ``overwrite_data`` keyword argument + * `scipy.signal.firwin` ``pass_zero`` argument now accepts new string arguments +that allow specification of the desired filter type: ``'bandpass'``, +``'lowpass'``, ``'highpass'``, and ``'bandstop'`` + * `scipy.sig
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-04-04 14:12:15 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.3908 (New) Package is "python-scipy" Thu Apr 4 14:12:15 2019 rev:35 rq:690624 version:1.2.1 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-03-22 14:50:35.090195804 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.3908/python-scipy.changes 2019-04-04 14:12:26.405299889 +0200 @@ -18,0 +19,2 @@ +bsc#1130564: Apply update from the openSUSE package + Other differences: --
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-03-22 14:50:33 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.25356 (New) Package is "python-scipy" Fri Mar 22 14:50:33 2019 rev:34 rq:687039 version:1.2.1 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-03-04 09:13:07.432679273 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.25356/python-scipy.changes 2019-03-22 14:50:35.090195804 +0100 @@ -1,0 +2,10 @@ +Tue Mar 19 17:08:19 UTC 2019 - Todd R + +- Update to 1.2.1 + * SyntaxError: Non-ASCII character 'xe2' in file scipy/stats/_continuous_distns.py on line 3346, but no encoding declared + * Version 1.2.0 introduces `too many indices for array` error in `optimize.newton()` + * scipy.stats.gaussian_kde normalizes the weights keyword argument externally. + * scipy.linalg.qr_update gives NaN result + * CI: Is scipy.scipy Windows Python36-32bit-full working? + +--- Old: scipy-1.2.0.tar.gz New: scipy-1.2.1.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.6mAxFx/_old 2019-03-22 14:50:38.586193800 +0100 +++ /var/tmp/diff_new_pack.6mAxFx/_new 2019-03-22 14:50:38.590193797 +0100 @@ -18,7 +18,7 @@ %global flavor @BUILD_FLAVOR@%{nil} -%define _ver 1_2_0 +%define _ver 1_2_1 %define shortname scipy %define pname python-%{shortname} @@ -90,7 +90,7 @@ %bcond_without suitesparse %endif Name: %{package_name} -Version:1.2.0 +Version:1.2.1 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later ++ scipy-1.2.0.tar.gz -> scipy-1.2.1.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-1.2.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new.25356/scipy-1.2.1.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-03-04 09:13:04 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.28833 (New) Package is "python-scipy" Mon Mar 4 09:13:04 2019 rev:33 rq:680663 version:1.2.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-02-14 14:36:49.267558575 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.28833/python-scipy.changes 2019-03-04 09:13:07.432679273 +0100 @@ -1,0 +2,5 @@ +Fri Mar 1 20:45:50 UTC 2019 - Matej Cepl + +- Use direct number in the Version tag + +--- Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.CzZ2Hn/_old 2019-03-04 09:13:08.312679115 +0100 +++ /var/tmp/diff_new_pack.CzZ2Hn/_new 2019-03-04 09:13:08.332679111 +0100 @@ -18,7 +18,6 @@ %global flavor @BUILD_FLAVOR@%{nil} -%define ver 1.2.0 %define _ver 1_2_0 %define shortname scipy %define pname python-%{shortname} @@ -91,7 +90,7 @@ %bcond_without suitesparse %endif Name: %{package_name} -Version:%ver +Version:1.2.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-02-14 14:36:43 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.28833 (New) Package is "python-scipy" Thu Feb 14 14:36:43 2019 rev:32 rq:674898 version:1.2.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-01-24 14:12:42.991410839 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.28833/python-scipy.changes 2019-02-14 14:36:49.267558575 +0100 @@ -1,0 +2,12 @@ +Tue Feb 12 08:55:55 UTC 2019 - Egbert Eich + +- Properly create and tear down default version links when the + HPC master packages are installed/uninstalled. +- Make use of %hpc_modules_init to make modules also known to + client. +- Module file: + * remove PATH element. Package has no binary, + * make cosmetic changes. +- Remove use of %%python_module in dependency. + +--- Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.sdFh9s/_old 2019-02-14 14:36:50.903557839 +0100 +++ /var/tmp/diff_new_pack.sdFh9s/_new 2019-02-14 14:36:50.907557837 +0100 @@ -20,7 +20,8 @@ %define ver 1.2.0 %define _ver 1_2_0 -%define pname python-scipy +%define shortname scipy +%define pname python-%{shortname} %bcond_with ringdisabled @@ -77,6 +78,7 @@ %endif %{!?compiler_family:%global compiler_family gnu} %{hpc_init -c %compiler_family %{?c_f_ver:-v %{c_f_ver}} %{?ext:-e %{ext}}} +%{hpc_modules_init openblas} %define package_name %{hpc_package_name %_ver} %define p_python_sitearch %hpc_python_sitearch %define p_prefix %hpc_prefix @@ -121,13 +123,13 @@ BuildRequires: lapacke-devel Requires: python-numpy >= 1.5.1 %else -BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel +BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel >= 1.3 BuildRequires: %{python_module numpy%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel} BuildRequires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel BuildRequires: lua-lmod -BuildRequires: suse-hpc -Requires: %{python_module numpy%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc} +BuildRequires: suse-hpc >= 0.3 Requires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc +Requires: python-numpy%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc >= 1.5.1 %endif %{?with_hpc:%{hpc_requires}} %python_subpackages @@ -163,7 +165,6 @@ %if %{with hpc} py_ver=%{$python_version} %hpc_setup -module load openblas module load python${py_ver/.*/}-numpy export CFLAGS="$(pkg-config --cflags openblas) %{optflags} -fno-strict-aliasing" LIBS="$(pkg-config --libs openblas)" export OPENBLAS=$OPENBLAS_LIB @@ -189,14 +190,13 @@ %if %{with hpc} py_ver=%{$python_version} %hpc_setup -module load openblas module load python${py_ver/.*/}-numpy %endif %__$python setup.py install --prefix=%{p_prefix} --root=%{buildroot} %fdupes %{buildroot}%{$python_sitearch} %if %{with hpc} -%define hpc_module_pname python${py_ver/.*/}-scipy +%define hpc_module_pname python${py_ver/.*/}-%{shortname} py_ver=%{$python_version} sitesearch_path=`$python -c "import sysconfig as s; print(s.get_paths(vars={'platbase':'%{hpc_prefix}','base':'%{hpc_prefix}'}).get('platlib'))"` rm -rf %{buildroot}${sitesearch_path}/scipy/{,core,distutils,f2py,fft,lib,linalg,ma,matrixlib,oldnumeric,polynomial,random,testing}/tests @@ -214,24 +214,28 @@ module-whatis "Name: %{pname} built with %{compiler_family} toolchain." module-whatis "Version: %{version}" module-whatis "Category: python module" -module-whatis "Description: %{summary}" +module-whatis "Description: %{SUMMARY}" module-whatis "URL %{url}" set version %{version} depends-on python${py_ver/.*/}-numpy -prepend-pathPATH%{hpc_bindir} prepend-pathPYTHONPATH ${sitesearch_path} setenv %{hpc_upcase_trans_hyph %pname}_DIR%{hpc_prefix} setenv %{hpc_upcase_trans_hyph %pname}_BIN%{hpc_bindir} -family "SciPy" +family %{shortname} EOF %endif } +%if %{with hpc} +%post +%hpc_module_delete_if_default +%endif + %files %{python_files} %license LICENSE.txt %{p_python_sitearch}/scipy/
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-01-24 14:12:42 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.28833 (New) Package is "python-scipy" Thu Jan 24 14:12:42 2019 rev:31 rq:667673 version:1.2.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2019-01-08 12:28:18.500283323 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.28833/python-scipy.changes 2019-01-24 14:12:42.991410839 +0100 @@ -1,0 +2,30 @@ +Mon Jan 21 19:11:15 UTC 2019 - Jan Engelhardt + +- Trim filler wording from description. + +--- +Fri Jan 18 11:33:14 UTC 2019 - e...@suse.com + +- Some futher changes: + * Remove the use of fftw. The code doesn't link against it +anywhere. For HPC we would have to build things separately +for different MPI flavors as fftw3 exists only with HPC +support there. + * restructure the build process: since the environment for +the right python version of Numpy needs to be loaded, wrap +entire build (and install) in %%{python_expand: ..}. + +--- +Thu Jan 17 23:58:18 UTC 2019 - jjo...@suse.com + +- Add support for HPC builds: + * Add _multibuild file + * Add standard and gnu-hpc builds + * Create initialization for both flavors to set the correct +target directories in macros and replace install paths +with these. + * Restructure the build process. + * Create 'master' packages for non-HPC builds. + * Create environment module information, + +--- New: _multibuild Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.u5c4Sb/_old 2019-01-24 14:12:43.851409847 +0100 +++ /var/tmp/diff_new_pack.u5c4Sb/_new 2019-01-24 14:12:43.855409841 +0100 @@ -1,7 +1,7 @@ # # spec file for package python-scipy # -# Copyright (c) 2018 SUSE LINUX GmbH, Nuernberg, Germany. +# Copyright (c) 2019 SUSE LINUX GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -16,10 +16,24 @@ # +%global flavor @BUILD_FLAVOR@%{nil} + +%define ver 1.2.0 +%define _ver 1_2_0 +%define pname python-scipy + +%bcond_with ringdisabled + +%define hpc_upcase_trans_hyph() %(echo %{**} | tr [a-z] [A-Z] | tr '-' '_') + +%if "%flavor" == "" +ExclusiveArch: do_not_build +%endif + %{?!python_module:%define python_module() python-%{**} python3-%{**}} -%if 0%{?is_opensuse} == 0 - %bcond_with openblas -%else + +%if "%flavor" == "standard" + %bcond_with hpc %ifarch armv6l s390 s390x m68k riscv64 %bcond_with openblas %else @@ -34,13 +48,48 @@ %endif %endif %endif + +%if "%flavor" == "gnu-hpc" + %bcond_without hpc + %define compiler_family gnu + %undefine c_f_ver +%endif + +%if "%flavor" == "gnu7-hpc" + %bcond_without hpc + %define compiler_family gnu + %define c_f_ver 7 +%endif + +%if %{without hpc} +%define package_name %{pname} +%define p_python_sitearch %python_sitearch +%define p_prefix %_prefix +%define p_bindir %_bindir +%else +# Magic for OBS Staging. Only build the flavors required by +# other packages in the ring. +%if %{with ringdisabled} +ExclusiveArch: do_not_build +%endif + %ifarch armv6l s390 s390x m68k riscv64 i586 +ExclusiveArch: do_not_build + %endif +%{!?compiler_family:%global compiler_family gnu} +%{hpc_init -c %compiler_family %{?c_f_ver:-v %{c_f_ver}} %{?ext:-e %{ext}}} +%define package_name %{hpc_package_name %_ver} +%define p_python_sitearch %hpc_python_sitearch +%define p_prefix %hpc_prefix +%define p_bindir %hpc_bindir +%endif + %if 0%{?is_opensuse} == 0 %bcond_with suitesparse %else %bcond_without suitesparse %endif -Name: python-scipy -Version:1.2.0 +Name: %{package_name} +Version:%ver Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later @@ -52,36 +101,45 @@ Patch0: no_implicit_decl.patch BuildRequires: %{python_module Cython >= 0.19} BuildRequires: %{python_module devel} -BuildRequires: %{python_module numpy-devel >= 1.5.1} BuildRequires: %{python_module setuptools} -BuildRequires: blas-devel BuildRequires: fdupes -BuildRequires: fftw-devel -BuildRequires: gcc-c++ -BuildRequires: gcc-fortran -BuildRequires: lapack-devel -BuildRequires: lapacke-devel BuildRequires: python-rpm-macros -BuildRequires: swig -Requires: python-numpy >= 1.5.1 %if %{with suitesparse} BuildReq
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2019-01-08 12:25:53 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new.28833 (New) Package is "python-scipy" Tue Jan 8 12:25:53 2019 rev:30 rq:660778 version:1.2.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2018-05-13 15:57:06.339756214 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new.28833/python-scipy.changes 2019-01-08 12:28:18.500283323 +0100 @@ -1,0 +2,7 @@ +Sat Dec 22 02:01:08 UTC 2018 - Todd R + +- Update to version 1.2.0 + * Many changes. Please see changelog at: +https://github.com/scipy/scipy/blob/v1.2.0/doc/release/1.2.0-notes.rst + +--- Old: scipy-1.1.0.tar.gz New: scipy-1.2.0.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.qvoHkq/_old 2019-01-08 12:28:19.596282126 +0100 +++ /var/tmp/diff_new_pack.qvoHkq/_new 2019-01-08 12:28:19.596282126 +0100 @@ -12,7 +12,7 @@ # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. -# Please submit bugfixes or comments via http://bugs.opensuse.org/ +# Please submit bugfixes or comments via https://bugs.opensuse.org/ # @@ -40,7 +40,7 @@ %bcond_without suitesparse %endif Name: python-scipy -Version:1.1.0 +Version:1.2.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later ++ scipy-1.1.0.tar.gz -> scipy-1.2.0.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-1.1.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new.28833/scipy-1.2.0.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2018-05-13 15:57:04 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Sun May 13 15:57:04 2018 rev:29 rq:606549 version:1.1.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2018-04-11 13:48:17.632525417 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2018-05-13 15:57:06.339756214 +0200 @@ -1,0 +2,12 @@ +Fri May 11 20:17:12 UTC 2018 - toddrme2...@gmail.com + +- Fix build on SLE + +--- +Mon May 7 06:48:57 UTC 2018 - toddrme2...@gmail.com + +- Update to version 1.1.0 + * Many changes. Please see changelog at: +https://github.com/scipy/scipy/blob/v1.1.0/doc/release/1.1.0-notes.rst + +--- Old: scipy-1.0.1.tar.gz New: scipy-1.1.0.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.K5cM9M/_old 2018-05-13 15:57:09.335646893 +0200 +++ /var/tmp/diff_new_pack.K5cM9M/_new 2018-05-13 15:57:09.339646747 +0200 @@ -20,7 +20,7 @@ %if 0%{?is_opensuse} == 0 %bcond_with openblas %else - %ifarch armv6l s390x m68k riscv64 + %ifarch armv6l s390 s390x m68k riscv64 %bcond_with openblas %else %if 0%{?sle_version} == 120200 @@ -34,8 +34,13 @@ %endif %endif %endif +%if 0%{?is_opensuse} == 0 + %bcond_with suitesparse +%else + %bcond_without suitesparse +%endif Name: python-scipy -Version:1.0.1 +Version:1.1.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause AND LGPL-2.0-or-later @@ -57,9 +62,11 @@ BuildRequires: lapack-devel BuildRequires: lapacke-devel BuildRequires: python-rpm-macros -BuildRequires: suitesparse-devel-static BuildRequires: swig Requires: python-numpy >= 1.5.1 +%if %{with suitesparse} +BuildRequires: suitesparse-devel-static +%endif %if %{with openblas} BuildRequires: openblas-devel %endif ++ scipy-1.0.1.tar.gz -> scipy-1.1.0.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-1.0.1.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-1.1.0.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2018-04-11 13:48:13 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Wed Apr 11 13:48:13 2018 rev:28 rq:594763 version:1.0.1 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2018-02-15 13:22:31.226483856 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2018-04-11 13:48:17.632525417 +0200 @@ -1,0 +2,42 @@ +Sun Apr 1 22:41:09 UTC 2018 - a...@gmx.de + +- update to version 1.0.1: + * Issues closed for 1.0.1 ++ #7493: ndimage.morphology functions are broken with numpy 1.13.0 ++ #8118: minimize_cobyla broken if disp=True passed ++ #8142: scipy-v1.0.0 pdist with metric=`minkowski` raises + `ValueError:... ++ #8173: scipy.stats.ortho_group produces all negative + determinants... ++ #8207: gaussian_filter seg faults on float16 numpy arrays ++ #8234: scipy.optimize.linprog interior-point presolve bug with + trivial... ++ #8243: Make csgraph importable again via from scipy.sparse + import* ++ #8320: scipy.root segfaults with optimizer 'lm' + * Pull requests for 1.0.1 ++ #8068: BUG: fix numpy deprecation test failures ++ #8082: BUG: fix solve_lyapunov import ++ #8144: MRG: Fix for cobyla ++ #8150: MAINT: resolve UPDATEIFCOPY deprecation errors ++ #8156: BUG: missing check on minkowski w kwarg ++ #8187: BUG: Sign of elements in random orthogonal 2D matrices in + "ortho_group_gen"... ++ #8197: CI: uninstall oclint ++ #8215: Fixes Numpy datatype compatibility issues ++ #8237: BUG: optimize: fix bug when variables fixed by bounds are + inconsistent... ++ #8248: BUG: declare "gfk" variable before call of terminate() in + newton-cg ++ #8280: REV: reintroduce csgraph import in scipy.sparse ++ #8322: MAINT: prevent scipy.optimize.root segfault closes #8320 ++ #8334: TST: stats: don't use exact equality check for hdmedian + test ++ #8477: BUG: signal/signaltools: fix wrong refcounting in + PyArray_OrderFilterND ++ #8530: BUG: linalg: Fixed typo in flapack.pyf.src. ++ #8566: CI: Temporarily pin Cython version to 0.27.3 ++ #8573: Backports for 1.0.1 ++ #8581: Fix Cython 0.28 build break of qhull.pyx + +--- Old: scipy-1.0.0.tar.gz New: scipy-1.0.1.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.vBfGQn/_old 2018-04-11 13:48:20.156434085 +0200 +++ /var/tmp/diff_new_pack.vBfGQn/_new 2018-04-11 13:48:20.160433939 +0200 @@ -16,6 +16,7 @@ # +%{?!python_module:%define python_module() python-%{**} python3-%{**}} %if 0%{?is_opensuse} == 0 %bcond_with openblas %else @@ -33,19 +34,21 @@ %endif %endif %endif - -%{?!python_module:%define python_module() python-%{**} python3-%{**}} Name: python-scipy -Version:1.0.0 +Version:1.0.1 Release:0 Summary:Scientific Tools for Python -License:BSD-3-Clause and LGPL-2.0+ +License:BSD-3-Clause AND LGPL-2.0-or-later Group: Development/Libraries/Python Url:http://www.scipy.org Source0: https://files.pythonhosted.org/packages/source/s/scipy/scipy-%{version}.tar.gz Source100: python-scipy-rpmlintrc # PATCH-FIX-OPENSUSE - no_implicit_decl.patch - Fix implicit-pointer-decl warnings and implicit-fortify-decl error Patch0: no_implicit_decl.patch +BuildRequires: %{python_module Cython >= 0.19} +BuildRequires: %{python_module devel} +BuildRequires: %{python_module numpy-devel >= 1.5.1} +BuildRequires: %{python_module setuptools} BuildRequires: blas-devel BuildRequires: fdupes BuildRequires: fftw-devel @@ -53,17 +56,13 @@ BuildRequires: gcc-fortran BuildRequires: lapack-devel BuildRequires: lapacke-devel +BuildRequires: python-rpm-macros BuildRequires: suitesparse-devel-static BuildRequires: swig +Requires: python-numpy >= 1.5.1 %if %{with openblas} BuildRequires: openblas-devel %endif -BuildRequires: %{python_module Cython >= 0.19} -BuildRequires: %{python_module devel} -BuildRequires: %{python_module numpy-devel >= 1.5.1} -BuildRequires: %{python_module setuptools} -BuildRequires: python-rpm-macros -Requires: python-numpy >= 1.5.1 %python_subpackages %description @@ -80,17 +79,17 @@ %prep %setup -q -n scipy-%{version} %patch0 -p1 -find . -type f -name "*.py" -exec sed -i "s|#!/usr/bin/env python||" {} \; +find . -type f -name "*.py" -exec sed -i "s|#!%{_bi
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2018-02-15 13:22:27 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Thu Feb 15 13:22:27 2018 rev:27 rq:576783 version:1.0.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2017-11-09 13:57:28.535818964 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2018-02-15 13:22:31.226483856 +0100 @@ -1,0 +2,5 @@ +Tue Feb 13 12:48:45 UTC 2018 - sch...@suse.de + +- Don't use openblas on m68k and riscv64 + +--- Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.I33xB8/_old 2018-02-15 13:22:33.086416287 +0100 +++ /var/tmp/diff_new_pack.I33xB8/_new 2018-02-15 13:22:33.086416287 +0100 @@ -1,7 +1,7 @@ # # spec file for package python-scipy # -# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany. +# Copyright (c) 2018 SUSE LINUX GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -15,10 +15,11 @@ # Please submit bugfixes or comments via http://bugs.opensuse.org/ # + %if 0%{?is_opensuse} == 0 %bcond_with openblas %else - %ifarch armv6l s390x + %ifarch armv6l s390x m68k riscv64 %bcond_with openblas %else %if 0%{?sle_version} == 120200 @@ -57,11 +58,11 @@ %if %{with openblas} BuildRequires: openblas-devel %endif -BuildRequires: python-rpm-macros BuildRequires: %{python_module Cython >= 0.19} BuildRequires: %{python_module devel} BuildRequires: %{python_module numpy-devel >= 1.5.1} BuildRequires: %{python_module setuptools} +BuildRequires: python-rpm-macros Requires: python-numpy >= 1.5.1 %python_subpackages @@ -107,7 +108,6 @@ %python_install %python_expand %fdupes %{buildroot}%{$python_sitearch} - %files %{python_files} %defattr(-,root,root,-) %doc LICENSE.txt
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2017-11-09 13:56:51 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Thu Nov 9 13:56:51 2017 rev:26 rq:536928 version:1.0.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2017-07-12 19:36:10.566906622 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2017-11-09 13:57:28.535818964 +0100 @@ -1,0 +2,8 @@ +Thu Oct 26 03:22:32 UTC 2017 - toddrme2...@gmail.com + +- Update to version 1.0.0 + * Many changes. Please see changelog at: + https://github.com/scipy/scipy/blob/v1.0.0/doc/release/1.0.0-notes.rst#why-1-0-now +- Rebase no_implicit_decl.patch + +--- Old: scipy-0.19.1.tar.gz New: python-scipy-rpmlintrc scipy-1.0.0.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.u7ef1g/_old 2017-11-09 13:57:30.863734158 +0100 +++ /var/tmp/diff_new_pack.u7ef1g/_new 2017-11-09 13:57:30.867734013 +0100 @@ -35,13 +35,14 @@ %{?!python_module:%define python_module() python-%{**} python3-%{**}} Name: python-scipy -Version:0.19.1 +Version:1.0.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause and LGPL-2.0+ Group: Development/Libraries/Python Url:http://www.scipy.org Source0: https://files.pythonhosted.org/packages/source/s/scipy/scipy-%{version}.tar.gz +Source100: python-scipy-rpmlintrc # PATCH-FIX-OPENSUSE - no_implicit_decl.patch - Fix implicit-pointer-decl warnings and implicit-fortify-decl error Patch0: no_implicit_decl.patch BuildRequires: blas-devel @@ -104,19 +105,8 @@ %install %python_install -%{python_expand pushd %{buildroot}%{$python_sitearch} -find scipy -type d -name tests | xargs rm -rf # Don't ship tests -# fix executability issue -modpaths=( "scipy/io/arff/arffread.py" "scipy/special/spfun_stats.py" "scipy/special/generate_ufuncs.py" ) -for f in "${modpaths[@]}" ; do -chmod a+x $f -sed -i "s|#! /usr/bin/env python|#!%__$python|" $f -$python -m compileall -d %{$python_sitearch} `dirname $f` -$python -O -m compileall -d %{$python_sitearch} `dirname $f` -done -popd -%fdupes %{buildroot}%{$python_sitearch} -} +%python_expand %fdupes %{buildroot}%{$python_sitearch} + %files %{python_files} %defattr(-,root,root,-) ++ no_implicit_decl.patch ++ --- /var/tmp/diff_new_pack.u7ef1g/_old 2017-11-09 13:57:30.887733284 +0100 +++ /var/tmp/diff_new_pack.u7ef1g/_new 2017-11-09 13:57:30.887733284 +0100 @@ -40,12 +40,13 @@ --- a/scipy/spatial/qhull_misc.h +++ b/scipy/spatial/qhull_misc.h -@@ -3,6 +3,8 @@ +@@ -2,6 +2,9 @@ + * Handle different Fortran conventions. */ - #include "qhull_misc_config.h" +#include +#include - ++ #if defined(NO_APPEND_FORTRAN) #if defined(UPPERCASE_FORTRAN) + #define F_FUNC(f,F) F ++ python-scipy-rpmlintrc ++ addFilter('devel-file-in-non-devel-package .*/tests/.*')++ scipy-0.19.1.tar.gz -> scipy-1.0.0.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.19.1.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-1.0.0.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2017-07-12 19:36:10 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Wed Jul 12 19:36:10 2017 rev:25 rq:509559 version:0.19.1 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2017-05-08 19:02:20.193886549 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2017-07-12 19:36:10.566906622 +0200 @@ -1,0 +2,28 @@ +Tue Jul 11 19:55:40 UTC 2017 - toddrme2...@gmail.com + +- More rpmlint fixes. + +--- +Mon Jul 10 18:25:30 UTC 2017 - toddrme2...@gmail.com + +- Update to version 0.19.1 + * #7214: Memory use in integrate.quad in scipy-0.19.0 + * #7258: linalg.matrix_balance gives wrong transformation matrix + * #7262: Segfault in daily testing + * #7273: scipy.interpolate._bspl.evaluate_spline gets wrong type + * #7335: scipy.signal.dlti(A,B,C,D).freqresp() fails + * #7211: BUG: convolve may yield inconsistent dtypes with method changed + * #7216: BUG: integrate: fix refcounting bug in quad() + * #7229: MAINT: special: Rewrite a test of wrightomega + * #7261: FIX: Corrected the transformation matrix permutation + * #7265: BUG: Fix broken axis handling in spectral functions + * #7266: FIX 7262: ckdtree crashes in query_knn. + * #7279: Upcast half- and single-precision floats to doubles in BSpline... + * #7336: BUG: Fix signal.dfreqresp for StateSpace systems + * #7419: Fix several issues in sparse.load_npz, save_npz + * #7420: BUG: stats: allow integers as kappa4 shape parameters +- Add no_implicit_decl.patch + Fixes implicit-pointer-decl warnings and implicit-fortify-decl error. +- Fix wrong-script-interpreter rpmlint error. + +--- Old: scipy-0.19.0.zip New: no_implicit_decl.patch scipy-0.19.1.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.afyHkU/_old 2017-07-12 19:36:14.610335454 +0200 +++ /var/tmp/diff_new_pack.afyHkU/_new 2017-07-12 19:36:14.614334889 +0200 @@ -16,45 +16,43 @@ # %if 0%{?is_opensuse} == 0 -%bcond_with openblas + %bcond_with openblas %else -%ifarch armv6l -%bcond_with openblas -%ifarch s390x -%bcond_with openblas -%else -%else -%if 0%{?sle_version} == 120200 -%ifarch i586 -%bcond_with openblas -%else -%bcond_without openblas -%endif -%else -%bcond_without openblas -%endif -%endif -%endif + %ifarch armv6l s390x +%bcond_with openblas + %else +%if 0%{?sle_version} == 120200 + %ifarch i586 +%bcond_with openblas + %else +%bcond_without openblas + %endif +%else + %bcond_without openblas +%endif + %endif %endif %{?!python_module:%define python_module() python-%{**} python3-%{**}} Name: python-scipy -Version:0.19.0 +Version:0.19.1 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause and LGPL-2.0+ Group: Development/Libraries/Python Url:http://www.scipy.org -Source0: https://files.pythonhosted.org/packages/source/s/scipy/scipy-%{version}.zip +Source0: https://files.pythonhosted.org/packages/source/s/scipy/scipy-%{version}.tar.gz +# PATCH-FIX-OPENSUSE - no_implicit_decl.patch - Fix implicit-pointer-decl warnings and implicit-fortify-decl error +Patch0: no_implicit_decl.patch BuildRequires: blas-devel BuildRequires: fdupes BuildRequires: fftw-devel BuildRequires: gcc-c++ BuildRequires: gcc-fortran BuildRequires: lapack-devel +BuildRequires: lapacke-devel BuildRequires: suitesparse-devel-static BuildRequires: swig -BuildRequires: unzip %if %{with openblas} BuildRequires: openblas-devel %endif @@ -63,8 +61,7 @@ BuildRequires: %{python_module devel} BuildRequires: %{python_module numpy-devel >= 1.5.1} BuildRequires: %{python_module setuptools} -Requires: %{python_module numpy >= 1.5.1} -BuildRoot: %{_tmppath}/%{name}-%{version}-build +Requires: python-numpy >= 1.5.1 %python_subpackages %description @@ -80,6 +77,7 @@ %prep %setup -q -n scipy-%{version} +%patch0 -p1 find . -type f -name "*.py" -exec sed -i "s|#!/usr/bin/env python||" {} \; cat > site.cfg << EOF @@ -99,17 +97,25 @@ export FFTW=%{_libdir} export BLAS=%{_libdir} export LAPACK=%{_libdir} +%if %{with openblas} export OPENBLAS=%{_libdir} +%endif %python_exec setup.py config_fc --fcompiler=gnu95 --noarch build %install %python_install -%{python_expand find %{buildroot}/%{python_sitearch}/scipy -type d -name te
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2017-05-08 19:02:00 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Mon May 8 19:02:00 2017 rev:24 rq:489640 version:0.19.0 Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2016-02-01 19:56:25.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2017-05-08 19:02:20.193886549 +0200 @@ -1,0 +2,73 @@ +Wed Apr 19 18:52:04 UTC 2017 - toddrme2...@gmail.com + +- Update to version 0.19.0 + + Highlights +* A unified foreign function interface layer, `scipy.LowLevelCallable`. +* Cython API for scalar, typed versions of the universal functions from + the `scipy.special` module, via `cimport scipy.special.cython_special`. +- Removed weave subpackage. It was removed upstream in this release. + +--- +Fri Oct 21 19:12:29 UTC 2016 - toddrme2...@gmail.com + +- Switch to single-spec version +- update to version 0.18.1: + * #6357: scipy 0.17.1 piecewise cubic hermite interpolation does not + return... + * #6420: circmean() changed behaviour from 0.17 to 0.18 + * #6421: scipy.linalg.solve_banded overwrites input 'b' when the + inversion... + * #6425: cKDTree INF bug + * #6435: scipy.stats.ks_2samp returns different values on different + computers + * #6458: Error in scipy.integrate.dblquad when using variable + integration... + * #6405: BUG: sparse: fix elementwise divide for CSR/CSC + * #6431: BUG: result for insufficient neighbours from cKDTree is + wrong. + * #6432: BUG Issue #6421: scipy.linalg.solve_banded overwrites input + 'b'... + * #6455: DOC: add links to release notes + * #6462: BUG: interpolate: fix .roots method of PchipInterpolator + * #6492: BUG: Fix regression in dblquad: #6458 + * #6543: fix the regression in circmean + * #6545: Revert gh-5938, restore ks_2samp + * #6557: Backports for 0.18.1 +- update to version 0.18.0: + (see http://scipy.github.io/devdocs/release.0.18.0.html for full changelog) + * Highlights of this release include: ++ A new ODE solver for two-point boundary value problems, + scipy.optimize.solve_bvp. ++ A new class, CubicSpline, for cubic spline interpolation of + data. ++ N-dimensional tensor product polynomials, + scipy.interpolate.NdPPoly. ++ Spherical Voronoi diagrams, scipy.spatial.SphericalVoronoi. ++ Support for discrete-time linear systems, scipy.signal.dlti. +- update to version 0.17.1: + * #5817: BUG: skew, kurtosis return np.nan instead of "propagate" + * #5850: Test failed with sgelsy + * #5898: interpolate.interp1d crashes using float128 + * #5953: Massive performance regression in cKDTree.query with L_inf + distance... + * #6062: mannwhitneyu breaks backward compatibility in 0.17.0 + * #6134: T test does not handle nans + * #5902: BUG: interpolate: make interp1d handle np.float128 again + * #5957: BUG: slow down with p=np.inf in 0.17 cKDTree.query + * #5970: Actually propagate nans through stats functions with + nan_policy="propagate" + * #5971: BUG: linalg: fix lwork check in *gelsy + * #6074: BUG: special: fixed violation of strict aliasing rules. + * #6083: BUG: Fix dtype for sum of linear operators + * #6100: BUG: Fix mannwhitneyu to be backward compatible + * #6135: Don't pass null pointers to LAPACK, even during workspace + queries. + * #6148: stats: fix handling of nan values in T tests and kendalltau +- specfile: + * updated source url to files.pythonhosted.org + * require setuptools + * Add openBLAS support. +This can improve performance in many situations. + * Drop ATLAS support. + +--- Old: scipy-0.17.0.tar.gz New: scipy-0.19.0.zip Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.m4yR18/_old 2017-05-08 19:02:23.513417612 +0200 +++ /var/tmp/diff_new_pack.m4yR18/_new 2017-05-08 19:02:23.517417047 +0200 @@ -1,7 +1,7 @@ # # spec file for package python-scipy # -# Copyright (c) 2016 SUSE LINUX Products GmbH, Nuernberg, Germany. +# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -15,38 +15,57 @@ # Please submit bugfixes or comments via http://bugs.opensuse.org/ # +%if 0%{?is_opensuse} == 0 +%bcond_with openblas +%else +%ifarch armv6l +%bcond_with openblas +%ifarch s390x +%bcond_with openbla
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2016-02-01 19:55:51 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2015-11-04 15:33:00.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2016-02-01 19:56:25.0 +0100 @@ -1,0 +2,20 @@ +Thu Jan 28 09:21:47 UTC 2016 - toddrme2...@gmail.com + +- specfile: + * update copyright year + +- update to version 0.17.0: + (see http://scipy.github.io/devdocs/release.0.17.0.html for full changelog) + * Highlights ++ New functions for linear and nonlinear least squares + optimization with constraints: scipy.optimize.lsq_linear and + scipy.optimize.least_squares ++ Support for fitting with bounds in scipy.optimize.curve_fit. ++ Significant improvements to scipy.stats, providing many + functions with better handing of inputs which have NaNs or are + empty, improved documentation, and consistent behavior between + scipy.stats and scipy.stats.mstats. ++ Significant performance improvements and new functionality in + scipy.spatial.cKDTree. + +--- Old: scipy-0.16.1.tar.gz New: scipy-0.17.0.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.WNyrCA/_old 2016-02-01 19:56:26.0 +0100 +++ /var/tmp/diff_new_pack.WNyrCA/_new 2016-02-01 19:56:26.0 +0100 @@ -1,7 +1,7 @@ # # spec file for package python-scipy # -# Copyright (c) 2015 SUSE LINUX Products GmbH, Nuernberg, Germany. +# Copyright (c) 2016 SUSE LINUX Products GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -19,7 +19,7 @@ %define with_atlas 0 Name: python-scipy -Version:0.16.1 +Version:0.17.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause ++ scipy-0.16.1.tar.gz -> scipy-0.17.0.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.16.1.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.17.0.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2015-11-04 15:32:59 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2015-08-01 11:37:59.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2015-11-04 15:33:00.0 +0100 @@ -1,0 +2,7 @@ +Fri Oct 30 09:04:05 UTC 2015 - toddrme2...@gmail.com + +- Update to 0.16.1 + SciPy 0.16.1 is a bug-fix release with no new features compared + to 0.16.0. + +--- Old: scipy-0.16.0.tar.gz New: scipy-0.16.1.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.H1jFB8/_old 2015-11-04 15:33:02.0 +0100 +++ /var/tmp/diff_new_pack.H1jFB8/_new 2015-11-04 15:33:02.0 +0100 @@ -19,7 +19,7 @@ %define with_atlas 0 Name: python-scipy -Version:0.16.0 +Version:0.16.1 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause ++ scipy-0.16.0.tar.gz -> scipy-0.16.1.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.16.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.16.1.tar.gz differ: char 5, line 1
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2015-08-01 11:37:57 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2015-03-03 11:16:16.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2015-08-01 11:37:59.0 +0200 @@ -1,0 +2,132 @@ +Mon Jul 27 15:24:02 UTC 2015 - toddrme2...@gmail.com + +- Remove Cython subpackage. The sources are not as cleanly + separated as the changelog implied. + +--- +Mon Jul 27 09:26:20 UTC 2015 - toddrme2...@gmail.com + +- Update to 0.16.0 + * Highlights of this release include: +- A Cython API for BLAS/LAPACK in scipy.linalg +- A new benchmark suite. It's now straightforward to add new benchmarks, + and they're routinely included with performance enhancement PRs. +- Support for the second order sections (SOS) format in scipy.signal. + * New features +- Benchmark suite + + The benchmark suite has switched to using Airspeed Velocity +for benchmarking. +- scipy.linalg improvements + + A full set of Cython wrappers for BLAS and LAPACK has been added in +the modules scipy.linalg.cython_blas and scipy.linalg.cython_lapack. +In Cython, these wrappers can now be cimported from their +corresponding modules and used without linking directly against BLAS +or LAPACK. + + The functions scipy.linalg.qr_delete, scipy.linalg.qr_insert and +scipy.linalg.qr_update for updating QR decompositions were added. + + The function scipy.linalg.solve_circulant solves a linear system with + a circulant coefficient matrix. + + The function scipy.linalg.invpascal computes the inverse of a Pascal matrix. + + The function scipy.linalg.solve_toeplitz, a Levinson-Durbin Toeplitz solver, +was added. + + Added wrapper for potentially useful LAPACK function *lasd4. It computes +the square root of the i-th updated eigenvalue of a positive symmetric rank-one +modification to a positive diagonal matrix. See its LAPACK documentation and +unit tests for it to get more info. + + Added two extra wrappers for LAPACK least-square solvers. Namely, they are +*gelsd and *gelsy. + + Wrappers for the LAPACK *lange functions, which calculate various matrix + norms, were added. + + Wrappers for *gtsv and *ptsv, which solve A*X = B for tri-diagonal + matrix A, were added. +- scipy.signal improvements + + Support for second order sections (SOS) as a format for IIR filters + was added. The new functions are: + * scipy.signal.sosfilt + * scipy.signal.sosfilt_zi, + * scipy.signal.sos2tf + * scipy.signal.sos2zpk + * scipy.signal.tf2sos + * scipy.signal.zpk2sos. + + Additionally, the filter design functions iirdesign, iirfilter, butter, + cheby1, cheby2, ellip, and bessel can return the filter in the SOS + format. + + The function scipy.signal.place_poles, which provides two methods to place + poles for linear systems, was added. + + The option to use Gustafsson's method for choosing the initial conditions + of the forward and backward passes was added to scipy.signal.filtfilt. + + New classes TransferFunction, StateSpace and ZerosPolesGain were + added. These classes are now returned when instantiating scipy.signal.lti. + Conversion between those classes can be done explicitly now. + + An exponential (Poisson) window was added as scipy.signal.exponential, and a + Tukey window was added as scipy.signal.tukey. + + The function for computing digital filter group delay was added as + scipy.signal.group_delay. + + The functionality for spectral analysis and spectral density estimation has + been significantly improved: scipy.signal.welch became ~8x faster and the + functions scipy.signal.spectrogram, scipy.signal.coherence and + scipy.signal.csd (cross-spectral density) were added. + + scipy.signal.lsim was rewritten - all known issues are fixed, so this + function can now be used instead of lsim2; lsim is orders of magnitude + faster than lsim2 in most cases. +- scipy.sparse improvements + + The function scipy.sparse.norm, which computes sparse matrix norms, was + added. + + The function scipy.sparse.random, which allows to draw random variates from + an arbitrary distribution, was added
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2015-03-03 11:15:44 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2015-01-14 11:45:20.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2015-03-03 11:16:16.0 +0100 @@ -1,0 +2,8 @@ +Mon Mar 2 15:57:12 UTC 2015 - toddrme2...@gmail.com + +- update to version 0.15.1: + * #4413: BUG: Tests too strict, f2py doesn't have to overwrite this array + * #4417: BLD: avoid using NPY_API_VERSION to check not using deprecated... + * #4418: Restore and deprecate scipy.linalg.calc_work + +--- Old: scipy-0.15.0.tar.gz New: scipy-0.15.1.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.WEBMNf/_old 2015-03-03 11:16:17.0 +0100 +++ /var/tmp/diff_new_pack.WEBMNf/_new 2015-03-03 11:16:17.0 +0100 @@ -19,7 +19,7 @@ %define with_atlas 0 Name: python-scipy -Version:0.15.0 +Version:0.15.1 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause ++ scipy-0.15.0.tar.gz -> scipy-0.15.1.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.15.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.15.1.tar.gz differ: char 5, line 1 -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2015-01-14 11:44:58 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2014-08-13 17:08:09.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2015-01-14 11:45:20.0 +0100 @@ -1,0 +2,54 @@ +Mon Jan 12 13:36:00 UTC 2015 - toddrme2...@gmail.com + +- Update to 0.15.0 + * New features +* scipy.optimize improvements + * scipy.optimize.linprog now provides a generic +linear programming similar to the way scipy.optimize.minimize +provides a generic interface to nonlinear programming optimizers. +Currently the only method supported is simplex which provides +a two-phase, dense-matrix-based simplex algorithm. Callbacks +functions are supported,allowing the user to monitor the progress +of the algorithm. + * The differential_evolution function is available from the scipy.optimize +module. Differential Evolution is an algorithm used for finding the global +minimum of multivariate functions. It is stochastic in nature (does not use +gradient methods), and can search large areas of candidate space, but often +requires larger numbers of function evaluations than conventional gradient +based techniques. +* scipy.signal improvements + * The function max_len_seq was added, which computes a Maximum +Length Sequence (MLS) signal. +* scipy.integrate improvements + * The interface between the scipy.integrate module and the QUADPACK library was +redesigned. It is now possible to use scipy.integrate to integrate +multivariate ctypes functions, thus avoiding callbacks to Python and providing +better performance, especially for complex integrand functions. +* scipy.sparse improvements + * scipy.sparse.linalg.svds now takes a LinearOperator as its main input. +* scipy.stats improvements + * Added a Dirichlet distribution as multivariate distribution. + * The new function `scipy.stats.median_test` computes Mood's median test. + * `scipy.stats.describe` returns a namedtuple rather than a tuple, allowing +users to access results by index or by name. + * Deprecated features +* The scipy.weave module is deprecated. It was the only module never ported + to Python 3.x, and is not recommended to be used for new code - use Cython + instead. In order to support existing code, scipy.weave has been packaged + separately: https://github.com/scipy/weave. It is a pure Python package, so + can easily be installed with pip install weave. +* scipy.special.bessel_diff_formula is deprecated. It is a private function, + and therefore will be removed from the public API in a following release. + * Backwards incompatible changes +* scipy.ndimage + * The functions scipy.ndimage.minimum_positions, + scipy.ndimage.maximum_positions and scipy.ndimage.extrema return + positions as ints instead of floats. + * Other changes +* scipy.integrate + * The OPTPACK and QUADPACK code has been changed to use the LAPACK matrix +solvers rather than the bundled LINPACK code. This means that there is no +longer any need for the bundled LINPACK routines, so they have been removed. +- Update copyright year + +--- Old: scipy-0.14.0.tar.gz New: scipy-0.15.0.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.QFCc3j/_old 2015-01-14 11:45:22.0 +0100 +++ /var/tmp/diff_new_pack.QFCc3j/_new 2015-01-14 11:45:22.0 +0100 @@ -1,7 +1,7 @@ # # spec file for package python-scipy # -# Copyright (c) 2014 SUSE LINUX Products GmbH, Nuernberg, Germany. +# Copyright (c) 2015 SUSE LINUX Products GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -19,7 +19,7 @@ %define with_atlas 0 Name: python-scipy -Version:0.14.0 +Version:0.15.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause ++ scipy-0.14.0.tar.gz -> scipy-0.15.0.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.14.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.15.0.tar.gz differ: char 5, line 1 -- To unsubscribe, e-mai
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2014-08-13 17:08:05 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2014-06-01 19:41:43.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2014-08-13 17:08:09.0 +0200 @@ -1,0 +2,6 @@ +Mon Aug 11 08:53:11 UTC 2014 - toddrme2...@gmail.com + +- Switch to pypi download location +- Minor spec file cleanups + +--- Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.0jcELp/_old 2014-08-13 17:08:12.0 +0200 +++ /var/tmp/diff_new_pack.0jcELp/_new 2014-08-13 17:08:12.0 +0200 @@ -18,15 +18,14 @@ %define with_atlas 0 -%define modname scipy -Name: python-%{modname} +Name: python-scipy Version:0.14.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause Group: Development/Libraries/Python Url:http://www.scipy.org -Source0:%{modname}-%{version}.tar.gz +Source0: https://pypi.python.org/packages/source/s/scipy/scipy-%{version}.tar.gz BuildRequires: blas-devel BuildRequires: fdupes BuildRequires: fftw-devel @@ -83,7 +82,7 @@ leading scientists and engineers. %prep -%setup -q -n %{modname}-%{version} +%setup -q -n scipy-%{version} find . -type f -name "*.py" -exec sed -i "s|#!/usr/bin/env python||" {} \; cat > site.cfg << EOF @@ -115,20 +114,20 @@ find %{buildroot}%{python_sitearch}/scipy/weave -type d -name examples | xargs rm -rf %fdupes %{buildroot}%{python_sitearch} # fix executability issue -chmod +x %{buildroot}%{python_sitearch}/%{modname}/io/arff/arffread.py -chmod +x %{buildroot}%{python_sitearch}/%{modname}/special/spfun_stats.py -chmod +x %{buildroot}%{python_sitearch}/%{modname}/special/generate_ufuncs.py +chmod +x %{buildroot}%{python_sitearch}/scipy/io/arff/arffread.py +chmod +x %{buildroot}%{python_sitearch}/scipy/special/spfun_stats.py +chmod +x %{buildroot}%{python_sitearch}/scipy/special/generate_ufuncs.py %files %defattr(-,root,root,-) %doc LICENSE.txt -%{python_sitearch}/%{modname}/ -%{python_sitearch}/%{modname}-%{version}-py%{py_ver}.egg-info -%exclude %{python_sitearch}/%{modname}/weave +%{python_sitearch}/scipy/ +%{python_sitearch}/scipy-%{version}-py*.egg-info +%exclude %{python_sitearch}/scipy/weave %files weave %defattr(-,root,root,-) %doc scipy/weave/examples -%{python_sitearch}/%{modname}/weave +%{python_sitearch}/scipy/weave %changelog -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2014-06-01 19:41:24 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2014-05-09 08:52:08.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2014-06-01 19:41:43.0 +0200 @@ -1,0 +2,6 @@ +Fri May 30 15:06:23 UTC 2014 - toddrme2...@gmail.com + +- Mark python-scipy-weave as deprecated. + Please use python-weave package instead. + +--- Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.FQRviK/_old 2014-06-01 19:41:45.0 +0200 +++ /var/tmp/diff_new_pack.FQRviK/_new 2014-06-01 19:41:45.0 +0200 @@ -61,12 +61,17 @@ leading scientists and engineers. %package weave -Summary:Scientific Tools for Python - Weave +Summary:DEPRECATED Scientific Tools for Python - Weave Group: Development/Libraries/Python Requires: %{name} = %{version} Provides: python-scipy-devel = %{version} %description weave +IMPORTANT: python-scipy-weave is deprecated and will be removed in +an upcoming python-scipy release. Please use python-weave instead. +It is an identical package that has been split out of the scipy +sources. + Scipy is open-source software for mathematics, science, and engineering. The core library is NumPy which provides convenient and fast N-dimensional array manipulation. The SciPy library is built to -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2014-05-09 08:52:06 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2014-03-02 18:22:39.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2014-05-09 08:52:08.0 +0200 @@ -1,0 +2,128 @@ +Thu May 8 10:16:00 UTC 2014 - toddrme2...@gmail.com + +- Update to version 0.14.0 + * New features +* scipy.interpolate improvements + * A new wrapper function `scipy.interpolate.interpn` for +interpolation onregular grids has been added. `interpn` +supports linear and nearest-neighbor interpolation in +arbitrary dimensions and spline interpolation in two +dimensions. + * Faster implementations of piecewise polynomials in power +and Bernstein polynomial bases have been added as +`scipy.interpolate.PPoly` and `scipy.interpolate.BPoly`. +New users should use these in favor of +`scipy.interpolate.PiecewisePolynomial`. + * `scipy.interpolate.interp1d` now accepts non-monotonic +inputs and sorts them. If performance is critical, sorting +can be turned off by using the new ``assume_sorted`` +keyword. + * Functionality for evaluation of bivariate spline +derivatives in ``scipy.interpolate`` has been added. + * The new class `scipy.interpolate.Akima1DInterpolator` +implements the piecewise cubic polynomial interpolation +scheme devised by H. Akima. + * Functionality for fast interpolation on regular, unevenly +spaced grids in arbitrary dimensions has been added as +`scipy.interpolate.RegularGridInterpolator` . +* ``scipy.linalg`` improvements + * The new function `scipy.linalg.dft` computes the matrix of +the discrete Fourier transform. + * A condition number estimation function for matrix +exponential, `scipy.linalg.expm_cond`, has been added. +* ``scipy.optimize`` improvements + * A set of benchmarks for optimize, which can be run with +``optimize.bench()``, has been added. + * `scipy.optimize.curve_fit` now has more controllable error +estimation via the ``absolute_sigma`` keyword. + * Support for passing custom minimization methods to +``optimize.minimize()`` and ``optimize.minimize_scalar()`` +has been added, currently useful especially for combining +``optimize.basinhopping()`` with custom local optimizer +routines. +* ``scipy.stats`` improvements + * A new class `scipy.stats.multivariate_normal` with +functionality for multivariate normal random variables +has been added. + * A lot of work on the ``scipy.stats`` distribution framework +has been done. Moment calculations (skew and kurtosis +mainly) are fixed and verified, all examples are now +runnable, and many small accuracy and performance +improvements for individual distributions were merged. + * The new function `scipy.stats.anderson_ksamp` computes the +k-sample Anderson-Darling test for the null hypothesis that +k samples come from the same parent population. +* ``scipy.signal`` improvements + * ``scipy.signal.iirfilter`` and related functions to design +Butterworth, Chebyshev, elliptical and Bessel IIR filters +now all use pole-zero ("zpk") format internally instead of +using transformations to numerator/denominator format. +The accuracy of the produced filters, especially high-order +ones, is improved significantly as a result. + * The new function `scipy.signal.vectorstrength` computes the +vector strength, a measure of phase synchrony, of a set of +events. +* ``scipy.special`` improvements + * The functions `scipy.special.boxcox` and +`scipy.special.boxcox1p`, which compute the +Box-Cox transformation, have been added. +* ``scipy.sparse`` improvements + * Significant performance improvement in CSR, CSC, and DOK +indexing speed. + * When using Numpy >= 1.9 (to be released in MM 2014), sparse +matrices function correctly when given to arguments of +``np.dot``, ``np.multiply`` and other ufuncs. +With earlier Numpy and Scipy versions, the results of such +operations are undefined and usually unexpected. + * Sparse matrices are no longer limited to ``2^31`` nonzero +elements. They automatically switch to using 64-bit index +data t
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2014-03-02 18:22:38 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2013-12-12 11:24:29.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2014-03-02 18:22:39.0 +0100 @@ -1,0 +2,10 @@ +Sun Mar 2 04:22:42 UTC 2014 - a...@gmx.de + +- updated to version 0.13.3 + Issues fixed: + * 3148: fix a memory leak in ``ndimage.label``. + * 3216: fix weave issue with too long file names for MSVC. + Other changes: + * Update Sphinx theme used for html docs so ``>>>`` in examples can be toggled. + +--- Old: scipy-0.13.2.tar.gz New: scipy-0.13.3.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.Yn8rJr/_old 2014-03-02 18:22:40.0 +0100 +++ /var/tmp/diff_new_pack.Yn8rJr/_new 2014-03-02 18:22:40.0 +0100 @@ -1,7 +1,7 @@ # # spec file for package python-scipy # -# Copyright (c) 2013 SUSE LINUX Products GmbH, Nuernberg, Germany. +# Copyright (c) 2014 SUSE LINUX Products GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -20,7 +20,7 @@ %define modname scipy Name: python-%{modname} -Version:0.13.2 +Version:0.13.3 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause @@ -33,9 +33,9 @@ BuildRequires: gcc-c++ BuildRequires: gcc-fortran BuildRequires: lapack-devel +BuildRequires: python-Cython >= 0.19 BuildRequires: python-devel BuildRequires: python-numpy-devel >= 1.5.1 -BuildRequires: python-Cython >= 0.19 BuildRequires: swig %if 0%{?suse_version} > 1140 BuildRequires: suitesparse-devel-static ++ scipy-0.13.2.tar.gz -> scipy-0.13.3.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.13.2.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.13.3.tar.gz differ: char 5, line 1 -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2013-12-12 11:24:28 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2013-11-27 15:31:39.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2013-12-12 11:24:29.0 +0100 @@ -1,0 +2,10 @@ +Wed Dec 11 14:15:25 UTC 2013 - toddrme2...@gmail.com + +- Update to version 0.13.2 + + require Cython 0.19, earlier versions have memory leaks in +fused types + + ndimage.label fix swapped 64-bitness test + + optimize.fmin_slsqp constraint violation +- Require python-Cython >= 0.19 + +--- Old: scipy-0.13.1.tar.gz New: scipy-0.13.2.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.JIdWNq/_old 2013-12-12 11:24:30.0 +0100 +++ /var/tmp/diff_new_pack.JIdWNq/_new 2013-12-12 11:24:30.0 +0100 @@ -20,7 +20,7 @@ %define modname scipy Name: python-%{modname} -Version:0.13.1 +Version:0.13.2 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause @@ -35,6 +35,7 @@ BuildRequires: lapack-devel BuildRequires: python-devel BuildRequires: python-numpy-devel >= 1.5.1 +BuildRequires: python-Cython >= 0.19 BuildRequires: swig %if 0%{?suse_version} > 1140 BuildRequires: suitesparse-devel-static ++ scipy-0.13.1.tar.gz -> scipy-0.13.2.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.13.1.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.13.2.tar.gz differ: char 5, line 1 -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2013-11-27 15:31:38 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2013-10-29 09:35:10.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2013-11-27 15:31:39.0 +0100 @@ -1,0 +2,8 @@ +Tue Nov 19 21:23:02 UTC 2013 - p.drou...@gmail.com + +- Update to version 0.13.1 + + ``ndimage.label`` returns incorrect results in scipy 0.13.0 + + ``ndimage.label`` return type changed from int32 to uint32 + + `ndimage.find_objects`` doesn't work with int32 input in some cases + +--- Old: scipy-0.13.0.tar.gz New: scipy-0.13.1.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.LAvF5b/_old 2013-11-27 15:31:40.0 +0100 +++ /var/tmp/diff_new_pack.LAvF5b/_new 2013-11-27 15:31:40.0 +0100 @@ -20,7 +20,7 @@ %define modname scipy Name: python-%{modname} -Version:0.13.0 +Version:0.13.1 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause ++ scipy-0.13.0.tar.gz -> scipy-0.13.1.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.13.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.13.1.tar.gz differ: char 5, line 1 -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2013-10-29 09:35:09 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2013-04-15 11:16:54.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2013-10-29 09:35:10.0 +0100 @@ -1,0 +2,42 @@ +Fri Oct 25 15:17:10 UTC 2013 - toddrme2...@gmail.com + +- Update to 0.13.0 + * Highlights + * support for fancy indexing and boolean comparisons with +sparse matrices + * interpolative decompositions and matrix functions in the +linalg module + * two new trust-region solvers for unconstrained minimization + * scipy.integrate improvements + * N-dimensional numerical integration + * dopri* improvements + * scipy.linalg improvements + * Interpolative decompositions + * Polar decomposition + * BLAS level 3 functions + * Matrix functions + * scipy.optimize improvements + * Trust-region unconstrained minimization algorithms + * scipy.sparse improvements + * Boolean comparisons and sparse matrices + * CSR and CSC fancy indexing + * scipy.io improvements + * Unformatted Fortran file reader + * scipy.io.wavfile enhancements + * scipy.interpolate improvements + * B-spline derivatives and antiderivatives + * Deprecated features +* expm2 and expm3 +* scipy.stats functions + * Backwards incompatible changes +* LIL matrix assignment +* Deprecated radon function removed +* Removed deprecated keywords xa and xb from + stats.distributions +* Changes to MATLAB file readers / writers +- Add a new flag to easily enable/disable atlas support for if it + ever gets fixed in the future +- Added numpy version number to requires and buildrequires +- Updated rpmlint fixes + +--- Old: scipy-0.12.0.tar.gz New: scipy-0.13.0.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.uMM5pI/_old 2013-10-29 09:35:17.0 +0100 +++ /var/tmp/diff_new_pack.uMM5pI/_new 2013-10-29 09:35:17.0 +0100 @@ -16,9 +16,11 @@ # +%define with_atlas 0 + %define modname scipy Name: python-%{modname} -Version:0.12.0 +Version:0.13.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause @@ -32,19 +34,18 @@ BuildRequires: gcc-fortran BuildRequires: lapack-devel BuildRequires: python-devel -BuildRequires: python-numpy-devel +BuildRequires: python-numpy-devel >= 1.5.1 BuildRequires: swig %if 0%{?suse_version} > 1140 BuildRequires: suitesparse-devel-static %endif -# FIXME: atlas is broken right now, do not use -# %if 0%{?suse_version} <= 1210 -# BuildRequires: libatlas3-devel -# %endif +%if %{with_atlas} == 1 +BuildRequires: libatlas3-devel +%endif %if 0%{?suse_version} <= 1110 %{!?python_sitearch: %global python_sitearch %(python -c "from distutils.sysconfig import get_python_lib; print get_python_lib(1)")} %endif -Requires: python-numpy +Requires: python-numpy >= 1.5.1 BuildRoot: %{_tmppath}/%{name}-%{version}-build %description @@ -92,9 +93,11 @@ EOF %build +%if %{with_atlas} == 1 +export ATLAS=%{_libdir}/atlas +%endif CFLAGS="%{optflags} -fno-strict-aliasing" \ -ATLAS=%{_libdir}/atlas \ -FFTW=%{_libdir} +FFTW=%{_libdir} \ BLAS=%{_libdir} \ LAPACK=%{_libdir} \ python setup.py config_fc --fcompiler=gnu95 --noarch build @@ -107,8 +110,8 @@ %fdupes %{buildroot}%{python_sitearch} # fix executability issue chmod +x %{buildroot}%{python_sitearch}/%{modname}/io/arff/arffread.py -chmod +x %{buildroot}%{python_sitearch}/%{modname}/io/arff/utils.py chmod +x %{buildroot}%{python_sitearch}/%{modname}/special/spfun_stats.py +chmod +x %{buildroot}%{python_sitearch}/%{modname}/special/generate_ufuncs.py %files %defattr(-,root,root,-) ++ scipy-0.12.0.tar.gz -> scipy-0.13.0.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.12.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.13.0.tar.gz differ: char 5, line 1 -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2013-06-19 15:54:21 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy" Changes: Old: python3-scipy.changes python3-scipy.spec Other differences: -- -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2013-04-15 11:16:52 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy", Maintainer is "" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2012-10-09 13:59:30.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2013-04-15 11:16:54.0 +0200 @@ -1,0 +2,10 @@ +Sun Apr 14 04:43:43 UTC 2013 - ter...@gmail.com + +- Update to version 0.12.0 + Some of the highlights of this release are: + * Completed QHull wrappers in scipy.spatial. + * cKDTree now a drop-in replacement for KDTree. + * A new global optimizer, basinhopping. + * Support for Python 2 and Python 3 from the same code base (no more 2to3). + +--- --- /work/SRC/openSUSE:Factory/python-scipy/python3-scipy.changes 2012-11-26 19:59:31.0 +0100 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python3-scipy.changes 2013-04-15 11:16:54.0 +0200 @@ -1,0 +2,10 @@ +Sun Apr 14 04:46:01 UTC 2013 - ter...@gmail.com + +- Update to version 0.12.0 + Some of the highlights of this release are: + * Completed QHull wrappers in scipy.spatial. + * cKDTree now a drop-in replacement for KDTree. + * A new global optimizer, basinhopping. + * Support for Python 2 and Python 3 from the same code base (no more 2to3). + +--- Old: scipy-0.11.0.tar.gz New: scipy-0.12.0.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.m0egFt/_old 2013-04-15 11:16:56.0 +0200 +++ /var/tmp/diff_new_pack.m0egFt/_new 2013-04-15 11:16:56.0 +0200 @@ -1,7 +1,7 @@ # # spec file for package python-scipy # -# Copyright (c) 2012 SUSE LINUX Products GmbH, Nuernberg, Germany. +# Copyright (c) 2013 SUSE LINUX Products GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -18,7 +18,7 @@ %define modname scipy Name: python-%{modname} -Version:0.11.0 +Version:0.12.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause ++ python3-scipy.spec ++ --- /var/tmp/diff_new_pack.m0egFt/_old 2013-04-15 11:16:56.0 +0200 +++ /var/tmp/diff_new_pack.m0egFt/_new 2013-04-15 11:16:56.0 +0200 @@ -1,7 +1,7 @@ # # spec file for package python3-scipy # -# Copyright (c) 2012 SUSE LINUX Products GmbH, Nuernberg, Germany. +# Copyright (c) 2013 SUSE LINUX Products GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -18,7 +18,7 @@ %define modname scipy Name: python3-%{modname} -Version:0.11.0 +Version:0.12.0 Release:0 Summary:Scientific Tools for Python License:BSD-3-Clause and LGPL-2.0+ @@ -32,11 +32,10 @@ BuildRequires: gcc-fortran BuildRequires: lapack-devel BuildRequires: python3 -BuildRequires: python3-2to3 BuildRequires: python3-devel BuildRequires: python3-numpy-devel -BuildRequires: swig BuildRequires: suitesparse-devel-static +BuildRequires: swig # FIXME: atlas is broken right now, do not use # %if 0%{?suse_version} <= 1210 # BuildRequires: libatlas3-devel ++ scipy-0.11.0.tar.gz -> scipy-0.12.0.tar.gz ++ /work/SRC/openSUSE:Factory/python-scipy/scipy-0.11.0.tar.gz /work/SRC/openSUSE:Factory/.python-scipy.new/scipy-0.12.0.tar.gz differ: char 5, line 1 -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2012-11-26 19:55:09 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy", Maintainer is "" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python3-scipy.changes 2012-10-09 13:59:30.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python3-scipy.changes 2012-11-26 19:59:31.0 +0100 @@ -1,0 +2,5 @@ +Thu Nov 22 14:18:55 UTC 2012 - toddrme2...@gmail.com + +- Removed openSUSE 11.4 spec file workarounds + +--- Other differences: -- ++ python3-scipy.spec ++ --- /var/tmp/diff_new_pack.EGRhTb/_old 2012-11-26 19:59:50.0 +0100 +++ /var/tmp/diff_new_pack.EGRhTb/_new 2012-11-26 19:59:50.0 +0100 @@ -31,23 +31,19 @@ BuildRequires: gcc-c++ BuildRequires: gcc-fortran BuildRequires: lapack-devel +BuildRequires: python3 BuildRequires: python3-2to3 BuildRequires: python3-devel BuildRequires: python3-numpy-devel BuildRequires: swig -%if 0%{?suse_version} > 1140 BuildRequires: suitesparse-devel-static -%endif # FIXME: atlas is broken right now, do not use # %if 0%{?suse_version} <= 1210 # BuildRequires: libatlas3-devel # %endif Requires: python3-numpy +Requires: python(abi) = %{py3_ver} BuildRoot: %{_tmppath}/%{name}-%{version}-build -%if 0%{?suse_version} <= 1140 -%{!?python3_sitearch: %global python3_sitearch %(python3 -c "from distutils.sysconfig import get_python_lib; print(get_python_lib(1))")} -%{!?py3_ver: %global py3_ver %(python3 -c "import sys; version=str(sys.version_info[0]) + '.' + str(sys.version_info[1]); print(version)" 2>/dev/null || echo PYTHON-NOT-FOUND)} -%endif %description Scipy is open-source software for mathematics, science, and -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2012-10-09 13:55:39 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy", Maintainer is "" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2012-09-11 09:18:35.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2012-10-09 13:59:30.0 +0200 @@ -1,0 +2,24 @@ +Mon Oct 1 12:45:12 UTC 2012 - toddrme2...@gmail.com + +- Update to version 0.11.0: + * Sparse Graph Submodule + * scipy.optimize improvements +* A unified interface to minimizers of univariate and + multivariate functions has been added. +* A unified interface to root finding algorithms for + multivariate functions has been added. +* The L-BFGS-B algorithm has been updated to version 3.0. + * scipy.linalg improvements +* New matrix equation solvers +* QZ and QR Decomposition +* Pascal matrices +* Sparse matrix construction and operations +* LSMR iterative solver +* Discrete Sine Transform + * scipy.interpolate improvements +* Interpolation in spherical coordinates + * scipy.stats improvements +* Binned statistics +- Remove upstreamed patches + +--- python3-scipy.changes: same change Old: integrate_dop-no-return-in-non-void.patch qhull-bufferoverflowstrncat.patch rboxlib-bufferoverflowstrncat.patch scipy-0.10.1.tar.gz New: scipy-0.11.0.tar.gz Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.a7xlon/_old 2012-10-09 13:59:31.0 +0200 +++ /var/tmp/diff_new_pack.a7xlon/_new 2012-10-09 13:59:31.0 +0200 @@ -11,30 +11,28 @@ # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. -# + # Please submit bugfixes or comments via http://bugs.opensuse.org/ # + %define modname scipy Name: python-%{modname} -Version:0.10.1 +Version:0.11.0 Release:0 -License:BSD-3-Clause Summary:Scientific Tools for Python -Url:http://www.scipy.org +License:BSD-3-Clause Group: Development/Libraries/Python +Url:http://www.scipy.org Source0:%{modname}-%{version}.tar.gz -Patch0: qhull-bufferoverflowstrncat.patch -Patch1: rboxlib-bufferoverflowstrncat.patch -Patch2: integrate_dop-no-return-in-non-void.patch +BuildRequires: blas-devel BuildRequires: fdupes BuildRequires: fftw-devel BuildRequires: gcc-c++ BuildRequires: gcc-fortran +BuildRequires: lapack-devel BuildRequires: python-devel BuildRequires: python-numpy-devel -BuildRequires: blas-devel -BuildRequires: lapack-devel BuildRequires: swig %if 0%{?suse_version} > 1140 BuildRequires: suitesparse-devel-static @@ -79,9 +77,6 @@ %prep %setup -q -n %{modname}-%{version} -%patch0 -p1 -b .bufferoverflowstrncat -%patch1 -p1 -b .bufferoverflowstrncat -%patch2 -p1 find . -type f -name "*.py" -exec sed -i "s|#!/usr/bin/env python||" {} \; cat > site.cfg << EOF ++ python3-scipy.spec ++ --- /var/tmp/diff_new_pack.a7xlon/_old 2012-10-09 13:59:31.0 +0200 +++ /var/tmp/diff_new_pack.a7xlon/_new 2012-10-09 13:59:31.0 +0200 @@ -11,31 +11,29 @@ # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. -# + # Please submit bugfixes or comments via http://bugs.opensuse.org/ # + %define modname scipy Name: python3-%{modname} -Version:0.10.1 +Version:0.11.0 Release:0 -License:BSD-3-Clause and LGPL-2.0+ Summary:Scientific Tools for Python -Url:http://www.scipy.org +License:BSD-3-Clause and LGPL-2.0+ Group: Development/Libraries/Python +Url:http://www.scipy.org Source0:%{modname}-%{version}.tar.gz -Patch0: qhull-bufferoverflowstrncat.patch -Patch1: rboxlib-bufferoverflowstrncat.patch -Patch2: integrate_dop-no-return-in-non-void.patch +BuildRequires: blas-devel BuildRequires: fdupes BuildRequires: fftw-devel BuildRequires: gcc-c++ BuildRequires: gcc-fortran +BuildRequires: lapack-devel BuildRequires: python3-2to3 BuildRequires: python3-devel BuildRequires: python3-numpy-devel -BuildRequires: blas-devel -BuildRequires: lapack-devel BuildRequires: swig %if 0%{?suse_versi
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2012-09-11 09:18:34 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy", Maintainer is "" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2012-06-10 23:04:48.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2012-09-11 09:18:35.0 +0200 @@ -1,0 +2,5 @@ +Mon Aug 27 09:12:38 UTC 2012 - toddrme2...@gmail.com + +- Disable broken libatlas3 + +--- python3-scipy.changes: same change Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.uYADlJ/_old 2012-09-11 09:18:41.0 +0200 +++ /var/tmp/diff_new_pack.uYADlJ/_new 2012-09-11 09:18:41.0 +0200 @@ -39,9 +39,10 @@ %if 0%{?suse_version} > 1140 BuildRequires: suitesparse-devel-static %endif -%if 0%{?suse_version} <= 1210 -BuildRequires: libatlas3-devel -%endif +# FIXME: atlas is broken right now, do not use +# %if 0%{?suse_version} <= 1210 +# BuildRequires: libatlas3-devel +# %endif %if 0%{?suse_version} <= 1110 %{!?python_sitearch: %global python_sitearch %(python -c "from distutils.sysconfig import get_python_lib; print get_python_lib(1)")} %endif ++ python3-scipy.spec ++ --- /var/tmp/diff_new_pack.uYADlJ/_old 2012-09-11 09:18:41.0 +0200 +++ /var/tmp/diff_new_pack.uYADlJ/_new 2012-09-11 09:18:41.0 +0200 @@ -40,9 +40,10 @@ %if 0%{?suse_version} > 1140 BuildRequires: suitesparse-devel-static %endif -%if 0%{?suse_version} <= 1210 -BuildRequires: libatlas3-devel -%endif +# FIXME: atlas is broken right now, do not use +# %if 0%{?suse_version} <= 1210 +# BuildRequires: libatlas3-devel +# %endif Requires: python3-numpy BuildRoot: %{_tmppath}/%{name}-%{version}-build %if 0%{?suse_version} <= 1140 -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org
commit python-scipy for openSUSE:Factory
Hello community, here is the log from the commit of package python-scipy for openSUSE:Factory checked in at 2012-06-10 23:01:55 Comparing /work/SRC/openSUSE:Factory/python-scipy (Old) and /work/SRC/openSUSE:Factory/.python-scipy.new (New) Package is "python-scipy", Maintainer is "" Changes: --- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes 2012-05-31 17:09:42.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python-scipy.changes 2012-06-10 23:04:48.0 +0200 @@ -1,0 +2,7 @@ +Mon Jun 4 15:32:19 UTC 2012 - toddrme2...@gmail.com + +- Add suitesparse buildrequires +- Remove blas/lapack tests since these build successfully on all + targets now + +--- --- /work/SRC/openSUSE:Factory/python-scipy/python3-scipy.changes 2012-05-31 17:09:42.0 +0200 +++ /work/SRC/openSUSE:Factory/.python-scipy.new/python3-scipy.changes 2012-06-10 23:04:48.0 +0200 @@ -1,0 +2,7 @@ +Mon Jun 4 15:32:19 UTC 2012 - toddrme2...@gmail.com + +- Add suitesparse buildrequires +- Remove blas/lapack tests since these build successfully on all + targets now + +--- Other differences: -- ++ python-scipy.spec ++ --- /var/tmp/diff_new_pack.b1EKuR/_old 2012-06-10 23:04:50.0 +0200 +++ /var/tmp/diff_new_pack.b1EKuR/_new 2012-06-10 23:04:50.0 +0200 @@ -33,16 +33,16 @@ BuildRequires: gcc-fortran BuildRequires: python-devel BuildRequires: python-numpy-devel +BuildRequires: blas-devel +BuildRequires: lapack-devel BuildRequires: swig +%if 0%{?suse_version} > 1140 +BuildRequires: suitesparse-devel-static +%endif %if 0%{?suse_version} <= 1210 BuildRequires: libatlas3-devel %endif -%if 0%{?suse_version} > 1110 -BuildRequires: blas-devel -BuildRequires: lapack-devel -%else -BuildRequires: blas -BuildRequires: lapack +%if 0%{?suse_version} <= 1110 %{!?python_sitearch: %global python_sitearch %(python -c "from distutils.sysconfig import get_python_lib; print get_python_lib(1)")} %endif Requires: python-numpy ++ python3-scipy.spec ++ --- /var/tmp/diff_new_pack.b1EKuR/_old 2012-06-10 23:04:50.0 +0200 +++ /var/tmp/diff_new_pack.b1EKuR/_new 2012-06-10 23:04:50.0 +0200 @@ -34,9 +34,12 @@ BuildRequires: python3-2to3 BuildRequires: python3-devel BuildRequires: python3-numpy-devel -BuildRequires: swig -BuildRequires: lapack-devel BuildRequires: blas-devel +BuildRequires: lapack-devel +BuildRequires: swig +%if 0%{?suse_version} > 1140 +BuildRequires: suitesparse-devel-static +%endif %if 0%{?suse_version} <= 1210 BuildRequires: libatlas3-devel %endif -- To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org For additional commands, e-mail: opensuse-commit+h...@opensuse.org