commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2020-10-13 15:46:27

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.3486 (New)


Package is "R-base"

Tue Oct 13 15:46:27 2020 rev:76 rq:841472 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2020-06-29 
21:18:25.873796231 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new.3486/R-base.changes  2020-10-13 
15:47:26.921496403 +0200
@@ -1,0 +2,117 @@
+Sat Oct 10 18:43:26 UTC 2020 - Detlef Steuer 
+
+- CHANGES IN R 4.0.3:
+
+  NEW FEATURES:
+
+* On platforms using configure option --with-internal-tzcode,
+  additional values "internal" and (on macOS only) "macOS" are
+  accepted for the environment variable TZDIR.  (See ?TZDIR.)
+
+  On macOS, "macOS" is used by default if the system timezone
+  database is a newer version than that in the R installation.
+
+* When install.packages(type = "source") fails to find a package in
+  a repository it mentions package versions which are excluded by
+  their R version requirement and links to hints on why a package
+  might not be found.
+
+* The default value for options("timeout") can be set from
+  enviromnent variable R_DEFAULT_INTERNET_TIMEOUT, still defaulting
+  to 60 (seconds) if that is not set or invalid.
+
+  This may be needed when child R processes are doing downloads,
+  for example during the installation of source packages which
+  download jars or other forms of data.
+
+  LINK-TIME OPTIMIZATION on a UNIX-ALIKE:
+
+* There is now support for parallelized Link-Time Optimization
+  (LTO) with GCC and for 'thin' LTO with clang _via_ setting the
+  LTO macro.
+
+* There is support for setting a different LTO flag for the Fortran
+  compiler, including to empty when mixing clang and gfortran (as
+  on macOS).  See file config.site.
+
+* There is a new LTO_LD macro to set linker options for LTO
+  compilation, for example to select an alternative linker or to
+  parallelize thin LTO.
+
+  DEPRECATED AND DEFUNCT:
+
+* The LINPACK argument to chol.default(), chol2inv(),
+  solve.default() and svd() has been defunct since R 3.1.0.  Using
+  it now gives a warning which will become an error in R 4.1.0.
+
+  BUG FIXES:
+
+* The code mitigating stack overflow with PCRE regexps on very long
+  strings is enabled for PCRE2 < 10.30 also when JIT is enabled,
+  since stack overflows have been seen in that case.
+
+* Fix to correctly show the group labels in dotchart() (which where
+  lost in the ylab improvement for R 4.0.0).
+
+* addmargins(*, ..) now also works when fn() is a local function,
+  thanks to bug report and patch PR#17124 from Alex Bertram.
+
+* rank(x) and hence sort(x) now work when x is an object (as per
+  is.object(x)) of type "raw" _and_ provides a valid `[` method,
+  e.g., for gmp::as.bigz(.) numbers.
+
+* chisq.test(*, simulate.p.value=TRUE) and r2dtable() now work
+  correctly for large table entries (in the millions).  Reported by
+  Sebastian Meyer and investigated by more helpers in PR#16184.
+
+* Low-level socket read/write operations have been fixed to
+  correctly signal communication errors. Previously, such errors
+  could lead to a segfault due to invalid memory access. Reported
+  and debugged by Dmitriy Selivanov in PR#17850.
+
+* quantile(x, pr) works more consistently for pr values slightly
+  outside [0,1], thanks to Suharto Anggono's PR#17891.
+
+  Further, quantile(x, prN, names=FALSE) now works even when prN
+  contains NAs, thanks to Anggono's PR#17892.  Ditto for ordered
+  factors or Date objects when type = 1 or 3, thanks to PR#17899.
+
+* Libcurl-based internet access, including curlGetHeaders(), was
+  not respecting the "timeout" option.  If this causes
+  unanticipated timeouts, consider increasing the default by
+  setting R_DEFAULT_INTERNET_TIMEOUT.
+
+* as.Date() now also works with an initial "", thanks to
+  Michael Chirico's PR#17909.
+
+* isS3stdGeneric(f) now detects an S3 generic also when it it is
+  trace()d, thanks to Gabe Becker's PR#17917.
+
+* R_allocLD() has been fixed to return memory aligned for long
+  double type PR#16534.
+
+* fisher.test() no longer segfaults when called again after its
+  internal stack has been exceeded PR#17904.
+
+* Accessing a long vector represented by a compact integer sequence
+  no longer segfaults (reported and debugged by Hugh Parsonage).
+
+* duplicated() now works also for strings with multiple encodings
+  inside a single vector PR#17809.
+
+* phyper(11, 15, 0, 12, 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2020-06-29 21:17:53

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.3060 (New)


Package is "R-base"

Mon Jun 29 21:17:53 2020 rev:75 rq:817664 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2020-06-07 
21:37:58.249384004 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new.3060/R-base.changes  2020-06-29 
21:18:25.873796231 +0200
@@ -1,0 +2,27 @@
+Mon Jun 22 09:18:01 UTC 2020 - Detlef Steuer 
+
+- CHANGES IN R 4.0.2:
+
+  UTILITIES:
+
+* R CMD check skips vignette re-building (with a warning) if the
+  VignetteBuilder package(s) are not available.
+
+  BUG FIXES:
+
+* Paths with non-ASCII characters caused problems for package
+  loading on Windows PR#17833.
+
+* Using tcltk widgets no longer crashes R on Windows.
+
+* source(*, echo=TRUE) no longer fails in some cases with empty
+  lines; reported by Bill Dunlap in PR#17769.
+
+* on.exit() now correctly matches named arguments, thanks to
+  PR#17815 (including patch) by Brodie Gaslam.
+
+* regexpr(*, perl=TRUE) no longer returns incorrect positions into
+  text containing characters outside of the Unicode Basic
+  Multilingual Plane on Windows.
+
+---

Old:

  R-4.0.1.tar.bz2

New:

  R-4.0.2.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.mQispu/_old  2020-06-29 21:18:26.541798298 +0200
+++ /var/tmp/diff_new_pack.mQispu/_new  2020-06-29 21:18:26.545798310 +0200
@@ -25,7 +25,7 @@
 %define release 1
 
 Name:   R-base
-Version:4.0.1
+Version:4.0.2
 Release:%release
 %define Rversion %{version}
 Source0:R-%{version}.tar.bz2

++ R-4.0.1.tar.bz2 -> R-4.0.2.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-4.0.1.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new.3060/R-4.0.2.tar.bz2 differ: char 11, 
line 1

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2020-06-07 21:37:20

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.3606 (New)


Package is "R-base"

Sun Jun  7 21:37:20 2020 rev:74 rq:812058 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2020-04-25 
20:35:31.698913370 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new.3606/R-base.changes  2020-06-07 
21:37:58.249384004 +0200
@@ -1,0 +2,52 @@
+Sat Jun  6 10:33:50 UTC 2020 - Detlef Steuer 
+
+- CHANGES IN R 4.0.1:
+
+  NEW FEATURES:
+
+* paste() and paste0() gain a new optional argument recycle0.  When
+  set to true, zero-length arguments are recycled leading to
+  character(0) after the sep-concatenation, i.e., to the empty
+  string "" if collapse is a string and to the zero-length value
+  character(0) when collapse = NULL.
+
+  A package whose code uses this should depend on R (>= 4.0.1).
+
+* The summary() method now maps the counts correctly to
+  the warning messages.
+
+  BUG FIXES:
+
+* aov(frml, ...) now also works where the formula deparses to more
+  than 500 characters, thanks to a report and patch proposal by Jan
+  Hauffa.
+
+* Fix a dozen places (code, examples) as Sys.setlocale() returns
+  the new rather than the previous setting.
+
+* Fix for adding two complex grid units via sum().  Thanks to Gu
+  Zuguang for the report and Thomas Lin Pedersen for the patch.
+
+* Fix parallel::mclapply(..., mc.preschedule=FALSE) to handle raw
+  vector results correctly. PR#17779
+
+* Computing the base value, i.e., 2, "everywhere", now uses
+  FLT_RADIX, as the original machar code looped indefinitely on the
+  ppc64 architecture for the longdouble case.
+
+* In R 4.0.0, sort.list(x) when is.object(x) was true, e.g., for x
+  <- I(letters), was accidentally using method = "radix".
+  Consequently, e.g., merge() was much slower than
+  previously; reported in PR#17794.
+
+* plot(y ~ x, ylab = quote(y[i])) now works, as e.g., for xlab;
+  related to PR#10525.
+
+* parallel::detect.cores(all.tests = TRUE) tries a matching OS name
+  before the other tests (which were intended only for unknown
+  OSes).
+
+* Parse data for raw strings is now recorded correctly. Reported by
+  Gabor Csardi. 
+
+---

Old:

  R-4.0.0.tar.bz2

New:

  R-4.0.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.vq8d6q/_old  2020-06-07 21:37:59.085386654 +0200
+++ /var/tmp/diff_new_pack.vq8d6q/_new  2020-06-07 21:37:59.08938 +0200
@@ -25,7 +25,7 @@
 %define release 1
 
 Name:   R-base
-Version:4.0.0
+Version:4.0.1
 Release:%release
 %define Rversion %{version}
 Source0:R-%{version}.tar.bz2
@@ -1078,7 +1078,7 @@
 
 %package -n R-boot
 Summary:Package provides recommended R-boot
-Version:1.3.24
+Version:1.3.25
 Release:%release
 Requires:   R-base
 
@@ -1102,6 +1102,7 @@
 %lang(de) %{_libdir}/R/library/boot/po/de/
 %lang(en) %{_libdir}/R/library/boot/po/en*/
 %lang(fr) %{_libdir}/R/library/boot/po/fr/
+%lang(fr) %{_libdir}/R/library/boot/po/it/
 %lang(ko) %{_libdir}/R/library/boot/po/ko/
 %lang(pl) %{_libdir}/R/library/boot/po/pl/
 %lang(ru) %{_libdir}/R/library/boot/po/ru/
@@ -1109,7 +1110,7 @@
 
 %package -n R-class
 Summary:Package provides recommended R-class
-Version:7.3.16
+Version:7.3.17
 Release:%release
 Requires:   R-base
 
@@ -1194,7 +1195,7 @@
 
 %package -n R-foreign
 Summary:Package provides recommended R-foreign
-Version:0.8.78
+Version:0.8.80
 Release:%release
 Requires:   R-base
 
@@ -1218,12 +1219,13 @@
 %lang(de) %{_libdir}/R/library/foreign/po/de/
 %lang(en) %{_libdir}/R/library/foreign/po/en*/
 %lang(fr) %{_libdir}/R/library/foreign/po/fr/
+%lang(fr) %{_libdir}/R/library/foreign/po/it/
 %lang(pl) %{_libdir}/R/library/foreign/po/pl/
 %{_libdir}/R/library/foreign/R/
 
 %package -n R-KernSmooth
 Summary:Package provides recommended R-KernSmooth
-Version:2.23.16
+Version:2.23.17
 Release:%release
 Requires:   R-base
 
@@ -1245,6 +1247,7 @@
 %lang(de) %{_libdir}/R/library/KernSmooth/po/de/
 %lang(en) %{_libdir}/R/library/KernSmooth/po/en*/
 %lang(fr) %{_libdir}/R/library/KernSmooth/po/fr/
+%lang(fr) %{_libdir}/R/library/KernSmooth/po/it/
 %lang(pl) %{_libdir}/R/library/KernSmooth/po/pl/
 %lang(ko) %{_libdir}/R/library/KernSmooth/po/ko/
 %{_libdir}/R/library/KernSmooth/R/
@@ 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2020-04-25 20:30:24

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.2738 (New)


Package is "R-base"

Sat Apr 25 20:30:24 2020 rev:73 rq:797070 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2020-03-01 
21:28:31.768619302 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new.2738/R-base.changes  2020-04-25 
20:35:31.698913370 +0200
@@ -1,0 +2,676 @@
+Fri Apr 24 08:08:31 UTC 2020 - Detlef Steuer 
+
+- CHANGES IN 4.0.0:
+
+  SIGNIFICANT USER-VISIBLE CHANGES:
+
+* Packages need to be (re-)installed under this version (4.0.0) of
+  R.
+
+* matrix objects now also inherit from class "array", so e.g.,
+  class(diag(1)) is c("matrix", "array").  This invalidates code
+  incorrectly assuming that class(matrix_obj)) has length one.
+
+  S3 methods for class "array" are now dispatched for matrix
+  objects.
+
+* There is a new syntax for specifying _raw_ character constants
+  similar to the one used in C++: r"(...)" with ... any character
+  sequence not containing the sequence )".  This makes it easier to
+  write strings that contain backslashes or both single and double
+  quotes.  For more details see ?Quotes.
+
+* R now uses a stringsAsFactors = FALSE default, and hence by
+  default no longer converts strings to factors in calls to
+  data.frame() and read.table().
+
+  A large number of packages relied on the previous behaviour and
+  so have needed/will need updating.
+
+* The plot() S3 generic function is now in package base rather than
+  package graphics, as it is reasonable to have methods that do not
+  use the graphics package.  The generic is currently re-exported
+  from the graphics namespace to allow packages importing it from
+  there to continue working, but this may change in future.
+
+  Packages which define S4 generics for plot() should be
+  re-installed and package code using such generics from other
+  packages needs to ensure that they are imported rather than rely
+  on their being looked for on the search path (as in a namespace,
+  the base namespace has precedence over the search path).
+
+  REFERENCE COUNTING:
+
+* Reference counting is now used instead of the NAMED mechanism for
+  determining when objects can be safely mutated in base C code.
+  This reduces the need for copying in some cases and should allow
+  further optimizations in the future.  It should help make the
+  internal code easier to maintain.
+
+  This change is expected to have almost no impact on packages
+  using supported coding practices in their C/C++ code.
+
+  MIGRATION TO PCRE2:
+
+* This version of R is built against the PCRE2 library for
+  Perl-like regular expressions, if available.  (On non-Windows
+  platforms PCRE1 can optionally be used if PCRE2 is not available
+  at build time.)  The version of PCRE in use can be obtained _via_
+  extSoftVersion(): PCRE1 (formerly known as 'PCRE') has versions
+  <= 8, PCRE2 versions >= 10.
+
+* Making PCRE2 available when building R from source is strongly
+  recommended (preferably version 10.30 or later) as PCRE1 is no
+  longer developed: version 8.44 is 'likely to be the final
+  release'.
+
+* PCRE2 reports errors for some regular expressions that were
+  accepted by PCRE1.  A hyphen now has to be escaped in a character
+  class to be interpreted as a literal (unless first or last in the
+  class definition).  \R, \B and \X are no longer allowed in
+  character classes (PCRE1 treated these as literals).
+
+* Option PCRE_study is no longer used with PCRE2, and is reported
+  as FALSE when that is in use.
+
+  NEW FEATURES:
+
+* assertError() and assertWarning() (in package tools) can now
+  check for _specific_ error or warning classes _via_ the new
+  optional second argument classes (which is not back compatible
+  with previous use of an unnamed second argument).
+
+* DF2formula(), the utility for the data frame method of formula(),
+  now works without parsing and explicit evaluation, starting from
+  Suharto Anggono's suggestion in PR#17555.
+
+* approxfun() and approx() gain a new argument na.rm defaulting to
+  true.  If set to false, missing y values now propagate into the
+  interpolated values.
+
+* Long vectors are now supported as the seq argument of a for()
+  loop.
+
+* str(x) gets a new deparse.lines option with a default to speed it
+  up when x is a large call object.
+
+* The internal traceback object produced when an error is signalled
+  

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2020-03-01 21:28:12

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.26092 (New)


Package is "R-base"

Sun Mar  1 21:28:12 2020 rev:72 rq:780561 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2020-01-21 
21:01:40.132885412 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new.26092/R-base.changes 2020-03-01 
21:28:31.768619302 +0100
@@ -1,0 +2,39 @@
+Sat Feb 29 18:08:15 UTC 2020 - Detlef Steuer 
+
+- CHANGES IN R 3.6.3:
+
+  NEW FEATURES:
+
+* The included LAPACK has been updated to version 3.9.0 (for the
+  included routines, just bug fixes).
+
+  BUG FIXES:
+
+* Fixed a C level integer overflow in rhyper(); reported by
+  Benjamin Tyner in PR#17694.
+
+* Uses of url(gzcon(.)) needing to extend buffer size have failed
+  (with HTTP/2 servers), reported by G'abor Cs'ardi.
+
+* predict(loess(..), se=TRUE) now errors out (instead of
+  seg.faulting etc) for large sample sizes, thanks to a report and
+  patch by Benjamin Tyner in PR#17121.
+
+* tools:assertCondition(., "error") and hence assertError() no
+  longer return errors twice (invisibly).
+
+* update(form, new) in the case of a long new formula sometimes
+  wrongly eliminated the intercept from form, or (more rarely)
+  added a garbage term (or seg.faulted !); the fix happened by
+  simplifying the C-level logic of terms.formula().  Reported by
+  Mathias Amb"uhl in PR#16326.
+
+* The error message from stopifnot(.., )
+  again contains the full "stopifnot(...)" call: Its attempted
+  suppression did not work consistently.
+
+* On Windows, download.file(., , "wininet", headers=character())
+  would fail; reported with patch proposal by Kevin Ushey in
+  PR#17710.
+
+---

Old:

  R-3.6.2.tar.bz2

New:

  R-3.6.3.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.PtsYFL/_old  2020-03-01 21:28:32.584620960 +0100
+++ /var/tmp/diff_new_pack.PtsYFL/_new  2020-03-01 21:28:32.584620960 +0100
@@ -25,7 +25,7 @@
 %define release 1
 
 Name:   R-base
-Version:3.6.2
+Version:3.6.3
 Release:%release
 %define Rversion %{version}
 Source0:R-%{version}.tar.bz2
@@ -1078,7 +1078,7 @@
 
 %package -n R-boot
 Summary:Package provides recommended R-boot
-Version:1.3.23
+Version:1.3.24
 Release:%release
 Requires:   R-base
 
@@ -1193,7 +1193,7 @@
 
 %package -n R-foreign
 Summary:Package provides recommended R-foreign
-Version:0.8.72
+Version:0.8.75
 Release:%release
 Requires:   R-base
 
@@ -1400,7 +1400,7 @@
 
 %package -n R-nlme
 Summary:Package provides recommended R-nlme
-Version:3.1.142
+Version:3.1.144
 Release:%release
 Requires:   R-base
 

++ R-3.6.2.tar.bz2 -> R-3.6.3.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-3.6.2.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new.26092/R-3.6.3.tar.bz2 differ: char 11, 
line 1

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2020-01-21 21:01:14

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.26092 (New)


Package is "R-base"

Tue Jan 21 21:01:14 2020 rev:71 rq:765989 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2019-12-12 
23:20:13.342202395 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new.26092/R-base.changes 2020-01-21 
21:01:40.132885412 +0100
@@ -1,0 +2,8 @@
+Mon Jan 20 18:30:04 UTC 2020 - Dan Čermák 
+
+- Don't mark %{_libdir}/R/doc as %doc:
+  This causes issues for rstudio, which requires the directory %{_libdir}/R/doc
+  to exist, but the directory is not present if libzypp is configured to omit
+  documentation.
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.H0DPIx/_old  2020-01-21 21:01:41.948886258 +0100
+++ /var/tmp/diff_new_pack.H0DPIx/_new  2020-01-21 21:01:41.968886268 +0100
@@ -1,7 +1,7 @@
 #
 # spec file for package R-base
 #
-# Copyright (c) 2019 SUSE LLC
+# Copyright (c) 2020 SUSE LLC
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -108,7 +108,7 @@
 
 %prep
 %setup -n R-%{version}
-#%patch0 -p1
+#%%patch0 -p1
 
 %build
 #export R_BROWSER="xdg-open"
@@ -310,7 +310,7 @@
 %{_bindir}/*
 %{_libdir}/R/bin/
 %{_libdir}/R/etc/
-#%{_libdir}/R/lib/
+#%%{_libdir}/R/lib/
 %{_libdir}/R/modules/
 %dir %{_libdir}/R/share
 %dir %{_libdir}/R/library
@@ -457,7 +457,9 @@
 %if 0%{?suse_version} > 1320
 %{_infodir}/*.gz
 %endif
-%doc %{_libdir}/R/doc/
+# this directory must *not* be marked as %%doc, as rstudio _requires_ the
+# directory to be present even if rpm is invoked with --excludedocs
+%{_libdir}/R/doc/
 
 # R-core-packages
 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2019-12-12 23:20:06

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.4691 (New)


Package is "R-base"

Thu Dec 12 23:20:06 2019 rev:70 rq:756062 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2019-08-30 
14:43:25.777408474 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new.4691/R-base.changes  2019-12-12 
23:20:13.342202395 +0100
@@ -1,0 +2,153 @@
+Thu Dec 12 11:37:25 UTC 2019 - Detlef Steuer 
+
+-  CHANGES IN R 3.6.2:
+
+  NEW FEATURES:
+
+* runmed(x, *) gains a new option na.action determining _how_ to
+  handle NaN or NA in x.
+
+* dotchart() gains new options ann, xaxt, frame.plot and log.
+
+  INSTALLATION on a UNIX-ALIKE:
+
+* Detection of the C stack direction has been moved from run-time
+  to configure: this is safer with LTO builds and allows the
+  detection to be overridden - see file config.site.
+
+* Source-code changes enable installation on platforms using gcc
+  -fno-common (the expected default for gcc 10.x).
+
+  C-LEVEL FACILITIES:
+
+* installTrChar (which is nowadays is wrapped by installChar) is
+  defined in Rinternals.h.  (Neither are part of the API.)
+
+  PACKAGE INSTALLATION:
+
+* Header Rconfig.h contains the value of FC_LEN_T deduced at
+  installation which is used by the prototypes in headers
+  R_ext/BLAS.h and R_ext/Lapack.h but to avoid extensive breakage
+  this is only exposed when USE_FC_LEN_T is defined.
+
+  If a package's C/C++ calls to BLAS/LAPACK allow for the 'hidden'
+  arguments used by most Fortran compilers to pass the lengths of
+  Fortran character arguments, define USE_FC_LEN_T and include
+  Rconfig.h (possibly _via_ R.h) before including R_ext/BLAS.h or
+  R_ext/Lapack.h.
+
+* A package with Fortran source code and perhaps C (but not C++)
+  sources can request for its shared object/DLL to be linked by the
+  Fortran compiler by including a line USE_FC_TO_LINK= in
+  src/Makevars[.win] and using $(SHLIB_OPENMP_FFLAGS) as part of
+  PKG_LIBS.
+
+  The known reason for doing so is a package which uses Fortran
+  (only) OpenMP on a platform where the Fortran OpenMP runtime is
+  incompatible with the C one (e.g. gfortran 9.x with clang).
+
+  UTILITIES:
+
+* R CMD check has a new option to mitigate checks leaving
+  files/directories in /tmp.  See the 'R Internals' manual - this
+  is part of --as-cran.
+
+  Windows:
+
+* The default standard for C++ in package installation is C++11 (as
+  it has been on other platforms where available since R 3.6.0: the
+  default toolchain on Windows was defaulting to C++98).
+
+  DEPRECATED AND DEFUNCT:
+
+* Support for specifying C++98 in package installation is
+  deprecated.
+
+* Support in R CMD config for F77, FCPIFCPLAGS, CPP, CXXCPP and
+  CXX98 and similar is deprecated.  (CPP is found from the system
+  make and may well not be set.)
+
+  Use $CC -E and $CXX -E instead of CPP and CXXCPP.
+
+  BUG FIXES:
+
+* runmed(x, *) when x contains missing values now works
+  consistently for both algorithm="Stuetzle" and "Turlach", and no
+  longer segfaults for "Turlach", as reported by Hilmar Berger.
+
+* apply(diag(3), 2:3, mean) now gives a helpful error message.
+
+* dgamma(x, shape, log=TRUE) now longer overflows to Inf for shape
+  < 1 and very small x, fixing PR#17577, reported by Jonathan
+  Rougier.
+
+* Buffer overflow in building error messages fixed. Reported by
+  Benjamin Tremblay.
+
+* options(str = .) is correctly initialized at package utils load
+  time, now.  A consequence is that str() in scripts now is more
+  consistent to interactive use, e.g., when displaying function(**)
+  argument lists.
+
+* as.numeric() now gives correct error message.
+
+* Printing ls.str() no longer wrongly shows "" in rare
+  cases.
+
+* Auto-printing S4 objects no longer duplicates the object, for
+  faster speed and reduced memory consumption. Reported by Aaron
+  Lun.
+
+* pchisq(, , ncp=100) no longer takes practically forever
+  in some cases.  Hence ditto for corresponding qchisq() calls.
+
+* x %% L for finite x no longer returns NaN when L is infinite, nor
+  suffers from cancellation for large finite L, thanks to Long Qu's
+  PR#17611.
+
+  Analogously, x %/% L and L %/% x suffer less from cancellation
+  and return values corresponding to limits for large L.
+
+
+* grepl(NA, *) now returns logical as documented.
+
+* options(warn=1e11) is an error now, instead of later leading to C
+  stack overflow because of 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2019-08-30 14:43:02

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.7948 (New)


Package is "R-base"

Fri Aug 30 14:43:02 2019 rev:69 rq:727204 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2019-08-29 
17:28:23.715259704 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new.7948/R-base.changes  2019-08-30 
14:43:25.777408474 +0200
@@ -1,0 +2,5 @@
+Fri Aug 30 10:24:32 UTC 2019 - John Vandenberg 
+
+- Use %license
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.arl3Aq/_old  2019-08-30 14:43:26.533408396 +0200
+++ /var/tmp/diff_new_pack.arl3Aq/_new  2019-08-30 14:43:26.537408396 +0200
@@ -323,7 +323,7 @@
 
 %dir %{_libdir}/R/share/dictionaries/
 %{_libdir}/R/share/dictionaries/en_stats.rds
-%{_libdir}/R/share/licenses/
+%license %{_libdir}/R/share/licenses/
 %{_libdir}/R/share/make/
 %{_libdir}/R/share/R/
 %dir %{_libdir}/R/share/Rd/
@@ -859,7 +859,7 @@
 %defattr(-, root, root)
 
 %dir %{_libdir}/R/library/stats/
-%{_libdir}/R/library/stats/COPYRIGHTS.modreg
+%license %{_libdir}/R/library/stats/COPYRIGHTS.modreg
 %{_libdir}/R/library/stats/demo/
 %{_libdir}/R/library/stats/DESCRIPTION
 %{_libdir}/R/library/stats/help/
@@ -1228,7 +1228,7 @@
 %defattr(-, root, root)
 
 %dir %{_libdir}/R/library/foreign/
-%{_libdir}/R/library/foreign/COPYRIGHTS
+%license %{_libdir}/R/library/foreign/COPYRIGHTS
 %{_libdir}/R/library/foreign/DESCRIPTION
 %{_libdir}/R/library/foreign/files/
 %{_libdir}/R/library/foreign/help/
@@ -1353,7 +1353,7 @@
 %defattr(-, root, root)
 
 %dir %{_libdir}/R/library/Matrix/
-%{_libdir}/R/library/Matrix/Copyrights
+%license %{_libdir}/R/library/Matrix/Copyrights
 %{_libdir}/R/library/Matrix/data/
 %{_libdir}/R/library/Matrix/doc/
 %{_libdir}/R/library/Matrix/DESCRIPTION
@@ -1363,7 +1363,7 @@
 %{_libdir}/R/library/Matrix/html/
 %{_libdir}/R/library/Matrix/INDEX
 %{_libdir}/R/library/Matrix/libs/
-%{_libdir}/R/library/Matrix/LICENCE
+%license %{_libdir}/R/library/Matrix/LICENCE
 %{_libdir}/R/library/Matrix/Meta/
 %{_libdir}/R/library/Matrix/NAMESPACE
 %{_libdir}/R/library/Matrix/NEWS.Rd
@@ -1575,7 +1575,7 @@
 %dir %{_libdir}/R/library/survival/
 %{_libdir}/R/library/survival/data/
 %{_libdir}/R/library/survival/CITATION
-%{_libdir}/R/library/survival/COPYRIGHTS
+%license %{_libdir}/R/library/survival/COPYRIGHTS
 %{_libdir}/R/library/survival/doc/
 %{_libdir}/R/library/survival/DESCRIPTION
 %{_libdir}/R/library/survival/help/

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2019-08-29 17:28:21

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.7948 (New)


Package is "R-base"

Thu Aug 29 17:28:21 2019 rev:68 rq:726998 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2019-07-05 
13:49:16.025504101 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new.7948/R-base.changes  2019-08-29 
17:28:23.715259704 +0200
@@ -1,0 +2,5 @@
+Sun Aug 11 06:08:45 UTC 2019 - John Vandenberg 
+
+- Fix Summary of R-core and R-core-devel
+ 
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.zZbkaK/_old  2019-08-29 17:28:25.579259414 +0200
+++ /var/tmp/diff_new_pack.zZbkaK/_new  2019-08-29 17:28:25.579259414 +0200
@@ -179,7 +179,7 @@
 
 # R-core
 %package -n R-core
-Summary:Libraries and includefiles for developing with R-base
+Summary:The core components of R
 Group:  Development/Libraries/Other
 Version:%{Rversion}
 Release:%release
@@ -337,7 +337,7 @@
 
 # R-core-devel
 %package -n R-core-devel
-Summary:Libraries and includefiles for developing with R-base
+Summary:Libraries and include files for developing with R-base
 Group:  Development/Libraries/Other
 Provides:   R-devel = %{version}
 Provides:   R-devel-macros = %{version}

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2019-07-05 13:49:14

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.4615 (New)


Package is "R-base"

Fri Jul  5 13:49:14 2019 rev:67 rq:713566 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2019-04-26 
22:55:00.633293468 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new.4615/R-base.changes  2019-07-05 
13:49:16.025504101 +0200
@@ -1,0 +2,81 @@
+Fri Jul  5 07:41:49 UTC 2019 - Detlef Steuer 
+
+- CHANGES IN R 3.6.1:
+
+  INSTALLATION on a UNIX-ALIKE:
+
+* The default detection of the shell variable libNN is overridden
+  for derivatives of Debian Linux, some of which have started to
+  have a /usr/lib64 directory.  (E.g. Ubuntu 19.04.)  As before, it
+  can be specified in config.site.
+
+  UTILITIES:
+
+* R CMD config knows the values of AR and RANLIB, often set for LTO
+  builds.
+
+  DEPRECATED AND DEFUNCT:
+
+* The use of a character vector with .Fortran() is formally
+  deprecated and gives a non-portability warning.  (It has long
+  been strongly discouraged in 'Writing R Extensions'.)
+
+  BUG FIXES:
+
+* On Windows, GUI package installation via menuInstallPkgs() works
+  again, thanks to Len Weil's and Duncan Murdoch's PR#17556.
+
+* R CMD check on data() fixing PR#17558 thanks to Duncan Murdoch.
+
+* quasi(*, variance = list(..)) now works more efficiently, and
+  should work in all cases fixing PR#17560.  Further, quasi(var =
+  mu(1-mu)) and quasi(var = "mu ^ 3") now work, and quasi(variance
+  = "log(mu)") now gives a correct error message.
+
+* Creation of lazy loading database during package installation is
+  again robust to Rprofile changing the current working directory
+  (PR#17559).
+
+* boxplot(y ~ f, horizontal=TRUE) now produces correct x- and
+  y-labels.
+
+* rbind.data.frame() allows to keep  levels from factor columns
+  (PR#17562) via new option factor.exclude.
+
+  Additionally, it works in one more case with matrix-columns which
+  had been reported on 2017-01-16 by Krzysztof Banas.
+
+* Correct messaging in C++ pragma checks in tools code for R CMD
+  check, fixing PR#17566 thanks to Xavier Robin.
+
+* print()ing and auto-printing no longer differs for functions with
+  a user defined print.function, thanks to Bill Dunlap's report.
+
+* On Windows, writeClipboard(.., format = ) now does correctly
+  pass format to the underlying C code, thanks to a bug report
+  (with patch) by Jenny Bryan.
+
+* as.data.frame() treats 1D arrays the same as vectors, PR#17570.
+
+* Improvements in smoothEnds(x, *) working with NAs (towards
+  runmed() working in that case, in the next version of R).
+* vcov(glm(), dispersion = *) works correctly again, fixing
+  PR#17571 thanks to Pavel Krivitsky.
+
+* R CMD INSTALL of binary packages on Windows now works also with
+  per-directory locking.
+
+* R CMD INSTALL and install.packages() on Windows are now more
+  robust against a locked file in an earlier installation of the
+  package to be installed.  The default value of option
+  install.lock on Windows has been changed to TRUE.
+
+* On Unix alikes (when readline is active), only expand tilde (~)
+  file names starting with a tilde, instead of almost all tildes.
+
+* In R documentation (*.Rd) files, \item [..] is no longer treated
+  specially when rendered in LaTeX and hence pdf, but rather shows
+  the brackets in all cases.
+
+
+---

Old:

  R-3.6.0.tar.bz2

New:

  R-3.6.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.ksSgM2/_old  2019-07-05 13:49:16.977505569 +0200
+++ /var/tmp/diff_new_pack.ksSgM2/_new  2019-07-05 13:49:16.977505569 +0200
@@ -25,7 +25,7 @@
 %define release 1
 
 Name:   R-base
-Version:3.6.0
+Version:3.6.1
 Release:%release
 %define Rversion %{version}
 Source0:R-%{version}.tar.bz2
@@ -1162,7 +1162,7 @@
 %package -n R-cluster
 Summary:Package provides recommended R-cluster
 Group:  Development/Libraries/Other
-Version:2.0.8
+Version:2.1.0
 Release:%release
 Requires:   R-base
 
@@ -1431,7 +1431,7 @@
 %package -n R-nlme
 Summary:Package provides recommended R-nlme
 Group:  Development/Libraries/Other
-Version:3.1.139
+Version:3.1.140
 Release:%release
 Requires:   R-base
 

++ R-3.6.0.tar.bz2 -> R-3.6.1.tar.bz2 ++

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2019-04-26 22:54:57

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.5536 (New)


Package is "R-base"

Fri Apr 26 22:54:57 2019 rev:66 rq:698133 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2019-03-11 
13:51:52.165248130 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new.5536/R-base.changes  2019-04-26 
22:55:00.633293468 +0200
@@ -1,0 +2,759 @@
+Fri Apr 26 09:17:02 UTC 2019 - Detlef Steuer 
+
+-  CHANGES IN R 3.6.0:
+
+  SIGNIFICANT USER-VISIBLE CHANGES:
+
+* Serialization format version 3 becomes the default for
+  serialization and saving of the workspace (save(), serialize(),
+  saveRDS(), compiler::cmpfile()).  Serialized data in format 3
+  cannot be read by versions of R prior to version 3.5.0.
+  Serialization format version 2 is still supported and can be
+  selected by version = 2 in the save/serialization functions.  The
+  default can be changed back for the whole R session by setting
+  environment variables R_DEFAULT_SAVE_VERSION and
+  R_DEFAULT_SERIALIZE_VERSION to 2.  For maximal
+  back-compatibility, files vignette.rds and partial.rdb generated
+  by R CMD build are in serialization format version 2, and resave
+  by default produces files in serialization format version 2
+  (unless the original is already in format version 3).
+
+* The default method for generating from a discrete uniform
+  distribution (used in sample(), for instance) has been changed.
+  This addresses the fact, pointed out by Ottoboni and Stark, that
+  the previous method made sample() noticeably non-uniform on large
+  populations.  See PR#17494 for a discussion.  The previous method
+  can be requested using RNGkind() or RNGversion() if necessary for
+  reproduction of old results.  Thanks to Duncan Murdoch for
+  contributing the patch and Gabe Becker for further assistance.
+
+  The output of RNGkind() has been changed to also return the
+  'kind' used by sample().
+
+  NEW FEATURES:
+
+* Sys.setFileTime() has been vectorized so arguments path and time
+  of length greater than one are now supported.
+
+* axis() gets new option gap.axis = NA for specifying a
+  multiplication factor for the minimal "gap" (distance) between
+  axis labels drawn.  Its default is 1 for labels _parallel_ to the
+  axis, and 0.25 for perpendicular ones.
+
+  Perpendicular labels no longer overlap, fixing bug PR#17384.
+
+* The default method of plot() gains new arguments xgap.axis = NA
+  and ygap.axis = NA to be passed to the x- and y- axis(..,
+  gap.axis=*) calls.
+
+* removeSource() now works not only for functions but also for some
+  language objects.
+
+* as.call(), rep.int(), rep_len() and nchar() dispatch internally.
+
+* is(object, class2) looks for class2 in the calling namespace
+  after looking in the namespace of class(object).
+* extendrange(.., f) with a length-2 f now extends separately to
+  the left and the right.
+
+* lengths() dispatches internally to S4 methods.
+
+* download.file() on Windows now uses URLdecode() to determine the
+  file extension, and uses binary transfer (mode = "wb") also for
+  file extension .rds.
+
+  The help page for download.file() now contains the same
+  information on all platforms.
+
+* Setting C locale for collation _via_ environment variables LC_ALL
+  and LC_COLLATE and _via_ a call to Sys.setlocale() now takes
+  precedence over environment variable R_ICU_LOCALE.
+
+* There is a new function, nullfile(), to give the file name of the
+  null system device (e.g., /dev/null) on the current platform.
+
+* There are two new options, keep.parse.data and
+  keep.parse.data.pkgs, which control whether parse data are
+  included into sources when keep.source or keep.source.pkgs is
+  TRUE.  By default, keep.parse.data.pkgs is now FALSE, which
+  changes previous behavior and significantly reduces space and
+  time overhead when sources are kept when installing packages.
+
+* In rapply(x, ..), x can also be "list-like" and of length >=
+  2^{31}.
+
+* trimws() gets new optional whitespace argument, allowing more
+  extensive definitions of "space", such as including Unicode
+  spaces (as wished in PR#17431).
+
+* weighted.mean() no longer coerces the weights to a double/numeric
+  vector, since sum() now handles integer overflow. This makes
+  weighted.mean() more polymorphic and endomorphic, but be aware
+  that the results are no longer guaranteed to be a vector of type
+  double.
+

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2019-03-11 13:51:46

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.28833 (New)


Package is "R-base"

Mon Mar 11 13:51:46 2019 rev:65 rq:683741 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2019-02-01 
11:46:54.728462106 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new.28833/R-base.changes 2019-03-11 
13:51:52.165248130 +0100
@@ -1,0 +2,26 @@
+Mon Mar 11 09:00:15 UTC 2019 - Detlef Steuer 
+
+-  CHANGES IN R 3.5.3:
+
+  INSTALLATION on a UNIX-ALIKE:
+
+* Detection of flags for C++98/11/14/17 has been improved: in
+  particular if CXX??STD is set, it is tried first with no
+  additional flags.
+
+  PACKAGE INSTALLATION:
+
+* New macro F_VISIBILITY as an alternative to F77_VISIBILITY.  This
+  will become the preferred form in R 3.6.0.
+
+  BUG FIXES:
+
+* writeLines(readLines(fnam), fnam) now works as expected, thanks
+  to Peter Meissner's PR#17528.
+
+* setClassUnion() no longer warns, but uses message() for now, when
+  encountering "non local" subclasses of class members.
+
+* stopifnot(exprs = T) no longer fails.
+
+---

Old:

  R-3.5.2.tar.bz2

New:

  R-3.5.3.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.i2kjYz/_old  2019-03-11 13:51:53.017247573 +0100
+++ /var/tmp/diff_new_pack.i2kjYz/_new  2019-03-11 13:51:53.021247570 +0100
@@ -22,11 +22,10 @@
 %define macrosdir %{_rpmconfigdir}/macros.d/
 %endif
 
-
 %define release 1
 
 Name:   R-base
-Version:3.5.2
+Version:3.5.3
 Release:%release
 %define Rversion %{version}
 Source0:R-%{version}.tar.bz2
@@ -53,19 +52,17 @@
 BuildRequires:  libjpeg-devel
 BuildRequires:  libpng-devel
 BuildRequires:  libtiff-devel
+BuildRequires:  pango-devel
 BuildRequires:  pcre-devel
 BuildRequires:  perl
 BuildRequires:  readline-devel
 BuildRequires:  shadow
-BuildRequires:  pkgconfig(x11)
-BuildRequires:  pkgconfig(xmu)
-BuildRequires:  pkgconfig(xscrnsaver)
-BuildRequires:  pkgconfig(xt)
-BuildRequires:  pkgconfig(zlib)
+BuildRequires:  tcl-devel
 BuildRequires:  texlive-bibtex
 BuildRequires:  texlive-cm-super
 BuildRequires:  texlive-dvips
 BuildRequires:  texlive-helvetic
+BuildRequires:  texlive-latex
 BuildRequires:  texlive-makeindex
 BuildRequires:  texlive-metafont
 BuildRequires:  texlive-psnfss
@@ -75,12 +72,14 @@
 BuildRequires:  xdg-utils
 BuildRequires:  xz-devel
 BuildRequires:  zip
-BuildRequires:  pango-devel
-BuildRequires:  tcl-devel
-BuildRequires:  texlive-latex
+BuildRequires:  pkgconfig(x11)
+BuildRequires:  pkgconfig(xmu)
+BuildRequires:  pkgconfig(xscrnsaver)
+BuildRequires:  pkgconfig(xt)
+BuildRequires:  pkgconfig(zlib)
 %if 0%{?suse_version} > 1320
-BuildRequires:  tex(inconsolata.sty)
 BuildRequires:  texinfo >= 5.1
+BuildRequires:  tex(inconsolata.sty)
 %endif # > 1320
 BuildRequires:  tk-devel
 Requires:   R-base-devel = %{version}
@@ -1131,7 +1130,7 @@
 %package -n R-class
 Summary:Package provides recommended R-class
 Group:  Development/Libraries/Other
-Version:7.3.14
+Version:7.3.15
 Release:%release
 Requires:   R-base
 
@@ -1196,7 +1195,7 @@
 %package -n R-codetools
 Summary:Package provides recommended R-codetools
 Group:  Development/Libraries/Other
-Version:0.2.15
+Version:0.2.16
 Release:%release
 Requires:   R-base
 
@@ -1382,7 +1381,7 @@
 %package -n R-Matrix-devel
 Summary:Package provides header files for recommended R-Matrix
 Group:  Development/Libraries/Other
-Version:1.2.14
+Version:1.2.15
 Release:%release
 Requires:   R-Matrix
 Requires:   R-base
@@ -1401,7 +1400,7 @@
 %package -n R-mgcv
 Summary:Package provides recommended R-mgcv
 Group:  Development/Libraries/Other
-Version:1.8.26
+Version:1.8.27
 Release:%release
 Requires:   R-base
 

++ R-3.5.2.tar.bz2 -> R-3.5.3.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-3.5.2.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new.28833/R-3.5.3.tar.bz2 differ: char 11, 
line 1

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2019-02-01 11:46:52

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.28833 (New)


Package is "R-base"

Fri Feb  1 11:46:52 2019 rev:64 rq:670208 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2018-12-21 
08:22:31.621507751 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new.28833/R-base.changes 2019-02-01 
11:46:54.728462106 +0100
@@ -1,0 +2,8 @@
+Tue Jan 15 20:46:55 UTC 2019 - Todd R 
+
+- Add architecture-independent package directory.
+  Taken from the Fedora version of R.
+- Add RPM macros to ease installation of R packages.
+- Fix building on older versions of openSUSE.
+
+---

New:

  macros.R



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.2CqayO/_old  2019-02-01 11:46:55.708461100 +0100
+++ /var/tmp/diff_new_pack.2CqayO/_new  2019-02-01 11:46:55.712461095 +0100
@@ -1,7 +1,7 @@
 #
 # spec file for package R-base
 #
-# Copyright (c) 2018 SUSE LINUX GmbH, Nuernberg, Germany.
+# Copyright (c) 2019 SUSE LINUX GmbH, Nuernberg, Germany.
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -16,13 +16,21 @@
 #
 
 
+%if 0%{?sle_version} < 15
+%define macrosdir %{_sysconfdir}/rpm/
+%else
+%define macrosdir %{_rpmconfigdir}/macros.d/
+%endif
+
+
 %define release 1
 
 Name:   R-base
 Version:3.5.2
 Release:%release
 %define Rversion %{version}
-Source: R-%{version}.tar.bz2
+Source0:R-%{version}.tar.bz2
+Source10:   macros.R
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
 # PATCH-FIX-UPSTREAM Fix tre when wchar_t is unsigned int
 #Patch0: tre.patch
@@ -54,13 +62,6 @@
 BuildRequires:  pkgconfig(xscrnsaver)
 BuildRequires:  pkgconfig(xt)
 BuildRequires:  pkgconfig(zlib)
-%if %suse_version < 1230
-# nowadays means == 1220
-BuildRequires:  texlive-bin
-BuildRequires:  texlive-bin-latex
-BuildRequires:  texlive-fonts-extra
-%else
-# else for < 1230, therefore >=1230
 BuildRequires:  texlive-bibtex
 BuildRequires:  texlive-cm-super
 BuildRequires:  texlive-dvips
@@ -74,18 +75,13 @@
 BuildRequires:  xdg-utils
 BuildRequires:  xz-devel
 BuildRequires:  zip
-
-# No tex(inconsolata.sty) provided in SLE-12, same for 42.1
- %if %suse_version != 1315
-BuildRequires:  tex(inconsolata.sty)
- %endif # !=1315
-%endif # > 1230
 BuildRequires:  pango-devel
 BuildRequires:  tcl-devel
 BuildRequires:  texlive-latex
-%if 0%{?suse_version} != 1315
+%if 0%{?suse_version} > 1320
+BuildRequires:  tex(inconsolata.sty)
 BuildRequires:  texinfo >= 5.1
-%endif # !=1315
+%endif # > 1320
 BuildRequires:  tk-devel
 Requires:   R-base-devel = %{version}
 Requires:   R-core = %{version}
@@ -113,7 +109,6 @@
 
 
 %prep 
-
 %setup -n R-%{version}
 #%patch0 -p1
 
@@ -125,7 +120,7 @@
 make %{?_smp_mflags}
 #make
 make pdf
-%if 0%{?suse_version} != 1315
+%if 0%{?suse_version} > 1320
 make info
 # Convert to UTF-8
 for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ 
doc/manual/R-admin.info doc/manual/R-exts.info-1; do
@@ -140,7 +135,7 @@
 
 # Installation of Info-files
 %{__install} -m 755 -d %{_infodir}
-%if 0%{?suse_version} != 1315
+%if 0%{?suse_version} > 1320
 make DESTDIR=%{buildroot} INFODIR=%{buildroot}%{_infodir} install-info
 %{__rm} -f %{buildroot}%{_infodir}/dir
 %{__rm} -f %{buildroot}%{_infodir}/dir.old
@@ -150,9 +145,7 @@
 
 chmod -x %{buildroot}%{_libdir}/R/library/mgcv/CITATION
 
-#%if %suse_version > 1020
 %fdupes -s $RPM_BUILD_ROOT  
-#%endif
 
 # Install ld.so.conf.d file to ensure other applications access the shared lib
 mkdir -p %{buildroot}/etc/ld.so.conf.d
@@ -160,6 +153,14 @@
 %{_libdir}/R/lib
 EOF
 
+# Install RPM macros
+mkdir -p %{buildroot}%{macrosdir}
+install -m 644 -t %{buildroot}%{macrosdir} %{SOURCE10}
+sed -i 's|@vers@|%{Rversion}|' %{buildroot}%{macrosdir}/macros.R
+
+# Add noarch R library directory
+mkdir -p %{buildroot}%{_datadir}/R/library
+
 %files -n R-base
 
 %package -n R-base-devel
@@ -201,6 +202,8 @@
 %{_libdir}/R/library/base/Meta/
 %{_libdir}/R/library/base/R/
 
+# noarch
+
 # translations
 %doc %{_libdir}/R/library/translations/DESCRIPTION
 %dir %{_libdir}/R/library/translations/
@@ -307,6 +310,7 @@
 
 # R-core main part
 %dir %{_libdir}/R
+%dir %{_datadir}/R
 %{_bindir}/*
 %{_libdir}/R/bin/
 %{_libdir}/R/etc/
@@ -314,6 +318,7 @@
 %{_libdir}/R/modules/
 %dir %{_libdir}/R/share
 %dir %{_libdir}/R/library
+%dir %{_datadir}/R/library/
 %{_libdir}/R/share/encodings/
 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2018-12-21 08:22:24

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new.28833 (New)


Package is "R-base"

Fri Dec 21 08:22:24 2018 rev:63 rq:660243 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2018-07-02 
23:33:58.373210475 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new.28833/R-base.changes 2018-12-21 
08:22:31.621507751 +0100
@@ -1,0 +2,116 @@
+Wed Dec 19 10:29:07 UTC 2018 - Detlef Steuer 
+
+-  CHANGES IN R 3.5.2:
+
+  PACKAGE INSTALLATION:
+
+* New macro CXX_VISIBILITY analogous to C_VISIBILITY (which several
+  packages have been misusing for C++ code) for the default C++
+  compiler (but not necessarily one used for non-default C++
+  dialects like C++14).
+
+  TESTING:
+
+* The random number generator tests in tests/p-r-random-tests.R no
+  longer fail occasionally as they now randomly sample from
+  "certified" random seeds.
+
+  BUG FIXES:
+
+* The "glm" method of drop1() miscalculated the score test
+  (test="Rao") when the model contained an offset.
+
+* Linear multiple empty models such as lm(y ~ 0) now have a
+  correctly dimensioned empty coefficient matrix; reported by Brett
+  Presnell.
+
+* vcov() and hence confint() now work (via a consistency
+  change in summary.lm()).
+
+* confint() now works correctly; reported on R-devel
+  by Steven Pav.
+
+* quade.test() now also works correctly when its arguments are not
+  yet sorted along groups, fixing PR#15842.
+
+* Installation on a Unix-alike tries harder to link to the pthread
+  library where required (rather than relying on OpenMP to provide
+  it: configuring with --disable-openmp was failing on some Linux
+  systems).
+
+* The data.frame method for print(x) is fast now also for large
+  data frames x and got an optional argument max, thanks to
+  suggestions by Juan Telleria.
+
+* hist() no longer integer overflows in very rare cases, fixing
+  PR#17450.
+
+* untar() ignored a character compressed argument: however many
+  external tar programs ignore the flags which should have been set
+  and automagically choose the compression type, and if appropriate
+  gzip or bzip2 compression would have been chosen from the magic
+  header of the tarball.
+
+* zapsmall(x) now works for more "number-like" objects.
+
+* The tools-internal function called from R CMD INSTALL now gets a
+  warnOption = 1 argument and only sets options(warn = warnOption)
+  when that increases the warning level (PR#17453).
+
+* Analogously, the tools-internal function called from R CMD check
+  gets a warnOption = 1 argument and uses the larger of that and
+  getOption("warn"), also allowing to be run with increased warning
+  level.
+
+* Parse data now have deterministic parent nodes (PR#16041).
+
+* Calling match() with length one x and POSIXlt table gave a
+  segfault (PR#17459).
+
+* Fork clusters could hang due to a race condition in cluster
+  initialization (makeCluster()).
+
+* nextn(n) now also works for larger n and no longer loops
+  infinitely for e.g, n <- 214e7.
+
+* cooks.distance() and rstandard() now work correctly for multiple
+  linear models ("mlm").
+
+* polym() and corresponding lm() prediction now also work for a
+  boundary "vector" case fixing PR#17474, reported by Alexandre
+  Courtiol.
+
+* With a very large number of variables terms() could segfault
+  (PR#17480).
+
+* cut(rep(0, 7)) now works, thanks to Joey Reid and Benjamin Tyner
+  (PR#16802).
+
+* download.file(*, method = "curl", cacheOK = FALSE) should work
+  now on Windows, thanks to Kevin Ushey's patch in PR#17323.
+
+* duplicated() now works, too, thanks to
+  Andreas Kersting's PR#17485; ditto for anyDuplicated().
+
+* legend(*, cex = 1:2) now works less badly.
+
+* The print() method for POSIXct and POSIXlt now correctly obeys
+  getOption("max.print"), fixing a long-standing typo, and it also
+  gets a corresponding optional max argument.
+
+* Unserialization of raw vectors serialized in ASCII representation
+  now works correctly.
+
+* [TRUE, ] <- list(c1, c2) now works correctly,
+  thanks to Suharto Anggono's PR#15362 and Emil Bode's patch in
+  PR#17504.
+
+* seq.int(*, by=by, length=n) no longer wrongly "drops fractional
+  parts" when by is integer, thanks to Suharto Anggono's report
+  PR#17506.
+
+* Buffering is disabled for file() connections to non-regular files
+  (like sockets), as well as fifo() and pipe() connections.  Fixes
+  

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2018-07-02 23:33:34

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Mon Jul  2 23:33:34 2018 rev:62 rq:620182 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2018-04-24 
15:35:06.573923611 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2018-07-02 
23:33:58.373210475 +0200
@@ -1,0 +2,72 @@
+Mon Jul  2 08:24:31 UTC 2018 - detlef.ste...@gmx.de
+
+-  CHANGES IN R 3.5.1 :
+
+  BUG FIXES:
+
+* file("stdin") is no longer considered seekable.
+
+* dput() and dump() are no longer truncating when
+  options(deparse.max.lines = *) is set.
+
+* Calls with an S3 class are no longer evaluated when printed,
+  fixing part of PR#17398, thanks to a patch from Lionel Henry.
+
+* Allow file argument of Rscript to include space even when it is
+  first on the command line.
+
+* callNextMethod() uses the generic from the environment of the
+  calling method. Reported by Herv'e Pag`es with well documented
+  examples.
+
+* Compressed file connections are marked as blocking.
+
+* optim(*, lower = c(-Inf, -Inf)) no longer warns (and switches the
+  method), thanks to a suggestion by John Nash.
+
+* predict(fm, newdata) is now correct also for models where the
+  formula has terms such as splines::ns(..) or stats::poly(..),
+  fixing PR#17414, based on a patch from Duncan Murdoch.
+
+* simulate.lm(glm(*, gaussian(link = ))) has been
+  corrected, fixing PR#17415 thanks to Alex Courtiol.
+
+* unlist(x) no longer fails in some cases of nested empty lists.
+  Reported by Steven Nydick.
+
+* qr.coef(qr()) now works.  Reported by Kun
+  Ren.
+
+* The radix sort is robust to vectors with >1 billion elements (but
+  long vectors are still unsupported). Thanks to Matt Dowle for the
+  fix.
+
+* Terminal connections (e.g., stdin) are no longer buffered. Fixes
+  PR#17432.
+
+* deparse(x), dput(x) and dump() now respect c()'s argument names
+  recursive and use.names, e.g., for x <- setNames(0, "recursive"),
+  thanks to Suharto Anggono's PR#17427.
+
+* Unbuffered connections now work with encoding conversion.
+  Reported by Stephen Berman.
+
+* .Renviron on Windows with Rgui is again by default searched for
+  in user documents directory when invoked _via_ the launcher icon.
+  Reported by Jeroen Ooms.
+
+* printCoefmat() now also works with explicit right=TRUE.
+
+* print.noquote() now also works with explicit quote=FALSE.
+
+* The default method for pairs(.., horInd=*, verInd=*) now gets the
+  correct order, thanks to reports by Chris Andrews and Gerrit
+  Eichner.  Additionally, when horInd or verInd contain only a
+  subset of variables, all the axes are labeled correctly now.
+
+* agrep("..|..", .., fixed=FALSE) now matches when it should,
+  thanks to a reminder by Andreas Kolter.
+
+* str(ch) now works for more invalid multibyte strings.
+
+---

Old:

  R-3.5.0.tar.bz2

New:

  R-3.5.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.brBfV9/_old  2018-07-02 23:34:00.221208188 +0200
+++ /var/tmp/diff_new_pack.brBfV9/_new  2018-07-02 23:34:00.225208183 +0200
@@ -19,7 +19,7 @@
 %define release 1
 
 Name:   R-base
-Version:3.5.0
+Version:3.5.1
 Release:%release
 %define Rversion %{version}
 Source: R-%{version}.tar.bz2
@@ -1303,7 +1303,7 @@
 %package -n R-MASS
 Summary:Package provides recommended R-MASS
 Group:  Development/Libraries/Other
-Version:7.3.49
+Version:7.3.50
 Release:%release
 Requires:   R-base
 
@@ -1394,7 +1394,7 @@
 %package -n R-mgcv
 Summary:Package provides recommended R-mgcv
 Group:  Development/Libraries/Other
-Version:1.8.23
+Version:1.8.24
 Release:%release
 Requires:   R-base
 
@@ -1556,7 +1556,7 @@
 %package -n R-survival
 Summary:Package provides recommended R-survival
 Group:  Development/Libraries/Other
-Version:2.41.3
+Version:2.42.3
 Release:%release
 Requires:   R-base
 

++ R-3.5.0.tar.bz2 -> R-3.5.1.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-3.5.0.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-3.5.1.tar.bz2 differ: char 11, line 1

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2018-04-24 15:35:02

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Tue Apr 24 15:35:02 2018 rev:61 rq:600354 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2018-03-22 
12:11:34.455786826 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2018-04-24 
15:35:06.573923611 +0200
@@ -1,0 +2,612 @@
+Mon Apr 23 08:32:02 UTC 2018 - detlef.ste...@gmx.de
+
+- CHANGES IN R 3.5.0:
+
+  SIGNIFICANT USER-VISIBLE CHANGES:
+
+* All packages are by default byte-compiled on installation.  This
+  makes the installed packages larger (usually marginally so) and
+  may affect the format of messages and tracebacks (which often
+  exclude .Call and similar).
+
+  NEW FEATURES:
+
+* factor() now uses order() to sort its levels, rather than
+  sort.list().  This allows factor() to support custom vector-like
+  objects if methods for the appropriate generics are defined.  It
+  has the side effect of making factor() succeed on empty or
+  length-one non-atomic vector(-like) types (e.g., "list"), where
+  it failed before.
+
+* diag() gets an optional names argument: this may require updates
+  to packages defining S4 methods for it.
+
+* chooseCRANmirror() and chooseBioCmirror() no longer have a
+  useHTTPS argument, not needed now all R builds support https://
+  downloads.
+
+* New summary() method for warnings() with a (somewhat
+  experimental) print() method.
+
+* (methods package.) .self is now automatically registered as a
+  global variable when registering a reference class method.
+
+* tempdir(check = TRUE) recreates the tempdir() directory if it is
+  no longer valid (e.g. because some other process has cleaned up
+  the /tmp directory).
+
+* New askYesNo() function and "askYesNo" option to ask the user
+  binary response questions in a customizable but consistent way.
+  (Suggestion of PR#17242.)
+
+* New low level utilities ...elt(n) and ...length() for working
+  with ... parts inside a function.
+
+* isTRUE() is more tolerant and now true in
+  
+ x <- rlnorm(99)
+ isTRUE(median(x) == quantile(x)["50%"])
+
+  New function isFALSE() defined analogously to isTRUE().
+
+* The default symbol table size has been increased from 4119 to
+  49157; this may improve the performance of symbol resolution when
+  many packages are loaded.  (Suggested by Jim Hester.)
+
+* line() gets a new option iter = 1.
+
+* Reading from connections in text mode is buffered, significantly
+  improving the performance of readLines(), as well as scan() and
+  read.table(), at least when specifying colClasses.
+
+* order() is smarter about picking a default sort method when its
+  arguments are objects.
+
+* available.packages() has two new arguments which control if the
+  values from the per-session repository cache are used (default
+  true, as before) and if so how old cached values can be to be
+  used (default one hour).
+
+  These arguments can be passed from install.packages(),
+  update.packages() and functions calling that: to enable this
+  available.packages(), packageStatus() and download.file() gain a
+  ... argument.
+
+* packageStatus()'s upgrade() method no longer ignores its ...
+  argument but passes it to install.packages().
+
+* installed.packages() gains a ... argument to allow arguments
+  (including noCache) to be passed from new.packages(),
+  old.packages(), update.packages() and packageStatus().
+
+* factor(x, levels, labels) now allows duplicated labels (not
+  duplicated levels!).  Hence you can map different values of x to
+  the same level directly.
+
+* Attempting to use names<-() on an S4 derivative of a basic type
+  no longer emits a warning.
+
+* The list method of within() gains an option keepAttrs = FALSE for
+  some speed-up.
+
+* system() and system2() now allow the specification of a maximum
+  elapsed time ('timeout').
+
+* debug() supports debugging of methods on any object of S4 class
+  "genericFunction", including group generics.
+
+* Attempting to increase the length of a variable containing NULL
+  using length()<- still has no effect on the target variable, but
+  now triggers a warning.
+
+* type.convert() becomes a generic function, with additional
+  methods that operate recursively over list and data.frame
+  objects. Courtesy of Arni Magnusson (PR#17269).
+
+* lower.tri(x) and upper.tri(x) only needing dim(x) now work 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2018-03-22 12:06:47

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Thu Mar 22 12:06:47 2018 rev:60 rq:589689 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2018-03-16 
10:44:58.868947224 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2018-03-22 
12:11:34.455786826 +0100
@@ -1,0 +2,6 @@
+Tue Mar 20 16:21:31 UTC 2018 - detlef.ste...@gmx.de
+
+- Setting correctly R_UNZIPCMD
+  Corrects this bug: http://bugzilla.suse.com/show_bug.cgi?id=1083075
+  
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.kbm6lq/_old  2018-03-22 12:11:35.579746541 +0100
+++ /var/tmp/diff_new_pack.kbm6lq/_new  2018-03-22 12:11:35.583746399 +0100
@@ -70,8 +70,10 @@
 BuildRequires:  texlive-psnfss
 BuildRequires:  texlive-tex
 BuildRequires:  texlive-times
+BuildRequires:  unzip
 BuildRequires:  xdg-utils
 BuildRequires:  xz-devel
+BuildRequires:  zip
 
 # No tex(inconsolata.sty) provided in SLE-12, same for 42.1
  %if %suse_version != 1315
@@ -99,11 +101,9 @@
 #Requires:   liblzma5
 #Requires:   libreadline6
 Requires:   make
-Requires:   unzip
 Requires:   xdg-utils
 Requires:   xorg-x11-fonts-100dpi
 Requires:   xorg-x11-fonts-75dpi
-Requires:   zip
 
 Provides:   R = %{version}
 
@@ -118,8 +118,8 @@
 #%patch0 -p1
 
 %build 
-export R_BROWSER="xdg-open"
-export R_PDFVIEWER="xdg-open"
+#export R_BROWSER="xdg-open"
+#export R_PDFVIEWER="xdg-open"
 %configure --enable-R-shlib LIBnn=%{_lib}
 
 make %{?_smp_mflags}

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2018-03-16 10:43:34

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Fri Mar 16 10:43:34 2018 rev:59 rq:587453 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2018-03-14 
19:39:59.879155834 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2018-03-16 
10:44:58.868947224 +0100
@@ -1,0 +2,62 @@
+Thu Mar 15 09:21:05 UTC 2018 - detlef.ste...@gmx.de
+
+- upstrem updated to 3.4.4
+
+  CHANGES IN R 3.4.4:
+
+  NEW FEATURES:
+
+* Sys.timezone() tries more heuristics on Unix-alikes and so is
+  more likely to succeed (especially on Linux).  For the slowest
+  method, a warning is given recommending that TZ is set to avoid
+  the search.
+
+* The version of LAPACK included in the sources has been updated to
+  3.8.0 (for the routines used by R, a very minor bug-fix change).
+
+* parallel::detectCores(logical = FALSE) is ignored on Linux
+  systems, since the information is not available with virtualized
+  OSes.
+
+  INSTALLATION on a UNIX-ALIKE:
+
+* configure will use pkg-config to find the flags to link to jpeg
+  if available (as it should be for the recently-released jpeg-9c
+  and libjpeg-turbo).  (This amends the code added in R 3.3.0 as
+  the module name in jpeg-9c is not what that tested for.)
+
+  DEPRECATED AND DEFUNCT:
+
+* Sys.timezone(location = FALSE) (which was a stop-gap measure for
+  Windows long ago) is deprecated.  It no longer returns the value
+  of environment variable TZ (usually a location).
+
+* Legacy support of make macros such as CXX1X is formally
+  deprecated: use the CXX11 forms instead.
+
+  BUG FIXES:
+
+* power.prop.test() now warns when it cannot solve the problem,
+  typically because of impossible constraints. (PR#17345)
+
+* removeSource() no longer erroneously removes NULL in certain
+  cases, thanks to D'enes T'oth.
+
+* nls(`NO [mol/l]` ~ f(t)) and nls(y ~ a) now work.  (Partly from
+  PR#17367)
+
+* R CMD build checks for GNU cp rather than assuming Linux has it.
+  (PR#17370 says 'Alpine Linux' does not.)
+
+* Non-UTF-8 multibyte character handling fixed more permanently
+  (PR#16732).
+
+* sum(, ) is more consistent.  (PR#17372)
+
+* rf() and rbeta() now also work correctly when ncp is not scalar,
+  notably when (partly) NA.  (PR#17375)
+
+* R CMD INSTALL now correctly sets C++ compiler flags when all
+  source files are in sub-directories of src.
+
+---

Old:

  R-3.4.3.tar.bz2

New:

  R-3.4.4.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.H1J8LX/_old  2018-03-16 10:45:00.328894654 +0100
+++ /var/tmp/diff_new_pack.H1J8LX/_new  2018-03-16 10:45:00.332894510 +0100
@@ -19,7 +19,7 @@
 %define release 1
 
 Name:   R-base
-Version:3.4.3
+Version:3.4.4
 Release:%release
 %define Rversion %{version}
 Source: R-%{version}.tar.bz2
@@ -1301,7 +1301,7 @@
 %package -n R-MASS
 Summary:Package provides recommended R-MASS
 Group:  Development/Libraries/Other
-Version:7.3.47
+Version:7.3.49
 Release:%release
 Requires:   R-base
 
@@ -1392,7 +1392,7 @@
 %package -n R-mgcv
 Summary:Package provides recommended R-mgcv
 Group:  Development/Libraries/Other
-Version:1.8.22
+Version:1.8.23
 Release:%release
 Requires:   R-base
 
@@ -1488,7 +1488,7 @@
 %package -n R-rpart
 Summary:Package provides recommended R-rpart
 Group:  Development/Libraries/Other
-Version:4.1.11
+Version:4.1.13
 Release:%release
 Requires:   R-base
 

++ R-3.4.3.tar.bz2 -> R-3.4.4.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-3.4.3.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-3.4.4.tar.bz2 differ: char 11, line 1

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2018-03-14 19:39:34

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Wed Mar 14 19:39:34 2018 rev:58 rq:586283 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2017-12-01 
15:53:53.619485374 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2018-03-14 
19:39:59.879155834 +0100
@@ -1,0 +2,5 @@
+Mon Mar 12 20:29:28 UTC 2018 - crrodrig...@opensuse.org
+
+- Do not buildrequire xorg-x11-devel but individual x libs. 
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.JOFgmG/_old  2018-03-14 19:40:01.523097439 +0100
+++ /var/tmp/diff_new_pack.JOFgmG/_new  2018-03-14 19:40:01.535097013 +0100
@@ -1,7 +1,7 @@
 #
 # spec file for package R-base
 #
-# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany.
+# Copyright (c) 2018 SUSE LINUX GmbH, Nuernberg, Germany.
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -30,7 +30,7 @@
 Url:http://www.r-project.org/
 
 Summary:R - statistics package (S-Plus like)
-License:GPL-2.0 or GPL-3.0
+License:GPL-2.0-only OR GPL-3.0-only
 Group:  Productivity/Scientific/Math
 BuildRoot:  %{_tmppath}/%{name}-%{version}-build
 BuildRequires:  bzip2
@@ -39,14 +39,21 @@
 BuildRequires:  gcc
 BuildRequires:  gcc-c++
 BuildRequires:  gcc-fortran
+BuildRequires:  glib2-devel
 BuildRequires:  libbz2-devel
 BuildRequires:  libcurl-devel
 BuildRequires:  libjpeg-devel
 BuildRequires:  libpng-devel
 BuildRequires:  libtiff-devel
+BuildRequires:  pcre-devel
 BuildRequires:  perl
 BuildRequires:  readline-devel
 BuildRequires:  shadow
+BuildRequires:  pkgconfig(x11)
+BuildRequires:  pkgconfig(xmu)
+BuildRequires:  pkgconfig(xscrnsaver)
+BuildRequires:  pkgconfig(xt)
+BuildRequires:  pkgconfig(zlib)
 %if %suse_version < 1230
 # nowadays means == 1220
 BuildRequires:  texlive-bin
@@ -65,6 +72,7 @@
 BuildRequires:  texlive-times
 BuildRequires:  xdg-utils
 BuildRequires:  xz-devel
+
 # No tex(inconsolata.sty) provided in SLE-12, same for 42.1
  %if %suse_version != 1315
 BuildRequires:  tex(inconsolata.sty)
@@ -77,7 +85,6 @@
 BuildRequires:  texinfo >= 5.1
 %endif # !=1315
 BuildRequires:  tk-devel
-BuildRequires:  xorg-x11-devel
 Requires:   R-base-devel = %{version}
 Requires:   R-core = %{version}
 Requires:   R-core-devel = %{version}

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2017-12-01 15:53:40

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Fri Dec  1 15:53:40 2017 rev:57 rq:546684 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2017-10-09 
19:40:26.616093961 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2017-12-01 
15:53:53.619485374 +0100
@@ -1,0 +2,44 @@
+Thu Nov 30 10:17:27 UTC 2017 - detlef.ste...@gmx.de
+
+- upstream updated to 3.4.3
+
+  CHANGES IN R 3.4.3:
+
+  INSTALLATION on a UNIX-ALIKE:
+
+* A workaround has been added for the changes in location of
+  time-zone files in macOS 10.13 'High Sierra' and again in
+  10.13.1, so the default time zone is deduced correctly from the
+  system setting when R is configured with --with-internal-tzcode
+  (the default on macOS).
+
+* R CMD javareconf has been updated to recognize the use of a Java
+  9 SDK on macOS.
+
+  BUG FIXES:
+
+* raw(0) & raw(0) and raw(0) | raw(0) again return raw(0) (rather
+  than logical(0)).
+
+* intToUtf8() converts integers corresponding to surrogate code
+  points to NA rather than invalid UTF-8, as well as values larger
+  than the current Unicode maximum of 0x10.  (This aligns with
+  the current RFC3629.)
+
+* Fix calling of methods on S4 generics that dispatch on ... when
+  the call contains 
+
+* Following Unicode 'Corrigendum 9', the UTF-8 representations of
+  U+FFFE and U+ are now regarded as valid by utf8ToInt().
+
+* range(c(TRUE, NA), finite = TRUE) and similar no longer return
+  NA. (Reported by Lukas Stadler.)
+
+* The self starting function attr(SSlogis, "initial") now also
+  works when the y values have exact minimum zero and is slightly
+  changed in general, behaving symmetrically in the y range.
+
+* The printing of named raw vectors is now formatted nicely as for
+  other such atomic vectors, thanks to Lukas Stadler.
+
+---

Old:

  R-3.4.2.tar.bz2

New:

  R-3.4.3.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.KTfK1Y/_old  2017-12-01 15:53:54.907439026 +0100
+++ /var/tmp/diff_new_pack.KTfK1Y/_new  2017-12-01 15:53:54.911438882 +0100
@@ -19,7 +19,7 @@
 %define release 1
 
 Name:   R-base
-Version:3.4.2
+Version:3.4.3
 Release:%release
 %define Rversion %{version}
 Source: R-%{version}.tar.bz2
@@ -1327,7 +1327,7 @@
 %package -n R-Matrix
 Summary:Package provides recommended R-Matrix
 Group:  Development/Libraries/Other
-Version:1.2.11
+Version:1.2.12
 Release:%release
 Requires:   R-base
 
@@ -1366,7 +1366,7 @@
 %package -n R-Matrix-devel
 Summary:Package provides header files for recommended R-Matrix
 Group:  Development/Libraries/Other
-Version:1.2.11
+Version:1.2.12
 Release:%release
 Requires:   R-Matrix
 Requires:   R-base
@@ -1385,7 +1385,7 @@
 %package -n R-mgcv
 Summary:Package provides recommended R-mgcv
 Group:  Development/Libraries/Other
-Version:1.8.20
+Version:1.8.22
 Release:%release
 Requires:   R-base
 

++ R-3.4.2.tar.bz2 -> R-3.4.3.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-3.4.2.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-3.4.3.tar.bz2 differ: char 11, line 1

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2017-10-09 19:40:22

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Mon Oct  9 19:40:22 2017 rev:56 rq:529866 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2017-07-29 
09:02:18.125245279 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2017-10-09 
19:40:26.616093961 +0200
@@ -1,0 +2,128 @@
+Fri Sep 29 07:47:28 UTC 2017 - detlef.ste...@gmx.de
+
+- upstream update to 3.4.2
+
+CHANGES IN R 3.4.2:
+
+  NEW FEATURES:
+
+* Setting the LC_ALL category in Sys.setlocale() invalidates any
+  cached locale-specific day/month names and the AM/PM indicator
+  for strptime() (as setting LC_TIME has since R 3.1.0).
+
+* The version of LAPACK included in the sources has been updated to
+  3.7.1, a bug-fix release.
+
+* The default for tools::write_PACKAGES(rds_compress=) has been
+  changed to "xz" to match the compression used by CRAN.
+
+* c() and unlist() are now more efficient in constructing the
+  names(.) of their return value, thanks to a proposal by Suharto
+  Anggono.  (PR#17284)
+
+  UTILITIES:
+
+* R CMD check checks for and R CMD build corrects CRLF line endings
+  in shell scripts configure and cleanup (even on Windows).
+
+  INSTALLATION on a UNIX-ALIKE:
+
+* The order of selection of OpenMP flags has been changed: Oracle
+  Developer Studio 12.5 accepts -fopenmp and -xopenmp but only the
+  latter enables OpenMP so it is now tried first.
+
+  BUG FIXES:
+
+* within(List, rm(x1, x2)) works correctly again, including when
+  List[["x2"]] is NULL.
+
+* regexec(pattern, text, *) now applies as.character(.) to its
+  first two arguments, as documented.
+
+* write.table() and related functions, writeLines(), and perhaps
+  other functions writing text to connections did not signal errors
+  when the writes failed, e.g. due to a disk being full.  Errors
+  will now be signalled if detected during the write, warnings if
+  detected when the connection is closed.  (PR#17243)
+
+* rt() assumed the ncp parameter was a scalar.  (PR#17306)
+
+* menu(choices) with more than 10 choices which easily fit into one
+  getOption("width")-line no longer erroneously repeats choices.
+  (PR#17312)
+
+* length()<- on a pairlist succeeds.  (https://stat.ethz.ch/pipermail/r-devel/2017-July/074680.html>)
+
+* Language objects such as quote(("\n")) or R functions are
+  correctly printed again, where R 3.4.1 accidentally duplicated
+  the backslashes.
+
+* Construction of names() for very large objects in c() and
+  unlist() now works, thanks to Suharto Anggono's patch proposals
+  in PR#17292.
+
+* Resource leaks (and similar) reported by Steve Grubb fixed.
+  (PR#17314, PR#17316, PR#17317, PR#17318, PR#17319, PR#17320)
+
+* model.matrix(~1, mf) now gets the row names from mf also when
+  they differ from 1:nrow(mf), fixing PR#14992 thanks to the
+  suggestion by Sebastian Meyer.
+
+* sigma(fm) now takes the correct denominator degrees of freedom
+  for a fitted model with NA coefficients.  (PR#17313)
+
+* hist(x, "FD") no longer "dies" with a somewhat cryptic error
+  message when x has extreme outliers or IQR() zero: nclass.FD(x)
+  tries harder to find a robust bin width h in the latter case, and
+  hist.default(*, breaks) now checks and corrects a too large
+  breaks number.  (PR#17274)
+
+* callNextMethod() works for ... methods.
+
+* qr.coef(qd, y) now has correct names also when qd is a complex QR
+  or stems from qr(*, LAPACK=TRUE).
+
+* Setting options(device = *) to an invalid function no longer
+  segfaults when plotting is initiated.  (PR#15883)
+
+* encodeString() no longer segfaults.
+  (PR#15885)
+
+* It is again possible to use configure --enable-maintainer-mode
+  without having installed notangle (it was required in R
+  3.4.[01]).
+
+* S4 method dispatch on ... calls the method by name instead of
+  .Method (for consistency with default dispatch), and only
+  attempts to pass non-missing arguments from the generic.
+
+* readRDS(textConnection(.)) works again.  (PR#17325)
+
+* (1:n)[-n] no longer segfaults for n <- 2.2e9 (on a platform with
+  enough RAM).
+
+* x <- 1:2; tapply(x, list(x, x), function(x) "")[1,2] now
+  correctly returns NA.  (PR#17333)
+
+* Running of finalizers after explicit GC request moved from the R
+  interface do_gc to the C interface R_gc.  This helps with
+  reclaiming inaccessible connections.
+
+* help.search(topic) and ??topic 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2017-07-29 09:01:34

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Sat Jul 29 09:01:34 2017 rev:55 rq:512757 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2017-07-01 
14:06:31.283851327 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2017-07-29 
09:02:18.125245279 +0200
@@ -1,0 +2,7 @@
+Thu Jul 27 08:01:11 UTC 2017 - detlef.ste...@gmx.de
+
+-  Corrected "bug" "https://bugzilla.suse.com/show_bug.cgi?id=1049503
+   R now installs zip and unzip, what in turn eases the installation
+   of packages directly from github via devtools.
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.woOgE4/_old  2017-07-29 09:02:19.249086503 +0200
+++ /var/tmp/diff_new_pack.woOgE4/_new  2017-07-29 09:02:19.257085373 +0200
@@ -92,9 +92,11 @@
 #Requires:   liblzma5
 #Requires:   libreadline6
 Requires:   make
+Requires:   unzip
 Requires:   xdg-utils
 Requires:   xorg-x11-fonts-100dpi
 Requires:   xorg-x11-fonts-75dpi
+Requires:   zip
 
 Provides:   R = %{version}
 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2017-07-01 14:05:57

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Sat Jul  1 14:05:57 2017 rev:54 rq:507288 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2017-04-24 
09:50:22.442462250 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2017-07-01 
14:06:31.283851327 +0200
@@ -1,0 +2,53 @@
+Fri Jun 30 10:40:03 UTC 2017 - detlef.ste...@gmx.de
+
+- upstream update to 3.4.1
+
+CHANGES IN R 3.4.1:
+
+  INSTALLATION on a UNIX-ALIKE:
+
+* The deprecated support for PCRE versions older than 8.20 has been
+  removed.
+
+  BUG FIXES:
+
+* getParseData() gave incorrect column information when code
+  contained multi-byte characters.  (PR#17254)
+
+* Asking for help using expressions like ?stats::cor() did not
+  work.  (PR#17250)
+
+* readRDS(url()) now works.
+
+* R CMD Sweave again returns status = 0 on successful completion.
+
+* Vignettes listed in .Rbuildignore were not being ignored
+  properly.  (PR#17246)
+
+* file.mtime() no longer returns NA on Windows when the file or
+  directory is being used by another process.  This affected
+  installed.packages(), which is now protected against this.
+
+* R CMD INSTALL Windows .zip file obeys --lock and --pkglock flags.
+
+* (Windows only) The choose.files() function could return incorrect
+  results when called with multi = FALSE.  (PR#17270)
+
+* aggregate(, drop = FALSE) now also works in case of
+  near-equal numbers in by.  (PR#16918)
+
+* fourfoldplot() could encounter integer overflow when calculating
+  the odds ratio. (PR#17286)
+
+* parse() no longer gives spurious warnings when extracting srcrefs
+  from a file not encoded in the current locale.
+
+  This was seen from R CMD check with inst/doc/*.R files, and check
+  has some additional protection for such files.
+
+* print.noquote(x) now always returns its argument x (invisibly).
+
+* Non-UTF-8 multibyte character sets were not handled properly in
+  source references.  (PR#16732) 
+
+---

Old:

  R-3.4.0.tar.bz2

New:

  R-3.4.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.jzMjFb/_old  2017-07-01 14:06:32.595666730 +0200
+++ /var/tmp/diff_new_pack.jzMjFb/_new  2017-07-01 14:06:32.595666730 +0200
@@ -19,7 +19,7 @@
 %define release 1
 
 Name:   R-base
-Version:3.4.0
+Version:3.4.1
 Release:%release
 %define Rversion %{version}
 Source: R-%{version}.tar.bz2
@@ -1200,7 +1200,7 @@
 %package -n R-foreign
 Summary:Package provides recommended R-foreign
 Group:  Development/Libraries/Other
-Version:0.8.67
+Version:0.8.69
 Release:%release
 Requires:   R-base
 
@@ -1325,7 +1325,7 @@
 %package -n R-Matrix
 Summary:Package provides recommended R-Matrix
 Group:  Development/Libraries/Other
-Version:1.2.9
+Version:1.2.10
 Release:%release
 Requires:   R-base
 
@@ -1364,7 +1364,7 @@
 %package -n R-Matrix-devel
 Summary:Package provides header files for recommended R-Matrix
 Group:  Development/Libraries/Other
-Version:1.2.9
+Version:1.2.10
 Release:%release
 Requires:   R-Matrix
 Requires:   R-base
@@ -1512,7 +1512,7 @@
 %package -n R-spatial
 Summary:Package provides recommended R-spatial
 Group:  Development/Libraries/Other
-Version:7.3.12
+Version:7.3.11
 Release:%release
 Requires:   R-base
 

++ R-3.4.0.tar.bz2 -> R-3.4.1.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-3.4.0.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-3.4.1.tar.bz2 differ: char 11, line 1

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2017-04-24 09:50:18

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Mon Apr 24 09:50:18 2017 rev:53 rq:489881 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2017-04-20 
20:58:46.633552828 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2017-04-24 
09:50:22.442462250 +0200
@@ -1,0 +2,555 @@
+Fri Apr 21 17:11:31 UTC 2017 - detlef.ste...@gmx.de
+
+- upstream update to 3.4.0
+
+  CHANGES IN R 3.4.0:
+
+  SIGNIFICANT USER-VISIBLE CHANGES:
+
+   * (Unix-alike) The default methods for download.file() and url()
+ now choose "libcurl" except for file:// URLs.  There will be
+ small changes in the format and wording of messages, including in
+ rare cases if an issue is a warning or an error.  For example,
+ when HTTP re-direction occurs, some messages refer to the final
+ URL rather than the specified one.
+
+ Those who use proxies should check that their settings are
+ compatible (see ?download.file: the most commonly used forms work
+ for both "internal" and "libcurl").
+
+   * table() has been amended to be more internally consistent and
+ become back compatible to R <= 2.7.2 again.  Consequently,
+ table(1:2, exclude = NULL) no longer contains a zero count for
+ , but useNA = "always" continues to do so.
+
+   * summary.default() no longer rounds, but its print method does
+ resulting in less extraneous rounding, notably of numbers in the
+ ten thousands.
+
+   * factor(x, exclude = L) behaves more rationally when x or L are
+ character vectors.  Further, exclude =  now behaves as
+ documented for long.
+
+   * Arithmetic, logic (&, |) and comparison (aka 'relational', e.g.,
+ <, ==) operations with arrays now behave consistently, notably
+ for arrays of length zero.
+
+ Arithmetic between length-1 arrays and longer non-arrays had
+ silently dropped the array attributes and recycled.  This now
+ gives a warning and will signal an error in the future, as it has
+ always for logic and comparison operations in these cases (e.g.,
+ compare matrix(1,1) + 2:3 and matrix(1,1) < 2:3).
+
+   * The JIT ('Just In Time') byte-code compiler is now enabled by
+ default at its level 3. This means functions will be compiled on
+ first or second use and top-level loops will be compiled and then
+ run.  (Thanks to Tomas Kalibera for extensive work to make this
+ possible.)
+
+ For now, the compiler will not compile code containing explicit
+ calls to browser(): this is to support single stepping from the
+ browser() call.
+
+ JIT compilation can be disabled for the rest of the session using
+ compiler::enableJIT(0) or by setting environment variable
+ R_ENABLE_JIT to 0.
+
+   * xtabs() works more consistently with NAs, also in its result no
+ longer setting them to 0.  Further, a new logical option addNA
+ allows to count NAs where appropriate.  Additionally, for the
+ case sparse = TRUE, the result's dimnames are identical to the
+ default case's.
+
+   * Matrix products now consistently bypass BLAS when the inputs have
+ NaN/Inf values. Performance of the check of inputs has been
+ improved. Performance when BLAS is used is improved for
+ matrix/vector and vector/matrix multiplication (DGEMV is now used
+ instead of DGEMM).
+
+ One can now choose from alternative matrix product
+ implementations _via_ options(matprod = ).  The "internal"
+ implementation is not optimized for speed but consistent in
+ precision with other summations in R (using long double
+ accumulators where available).  "blas" calls BLAS directly for
+ best speed, but usually with undefined behavior for inputs with
+ NaN/Inf.
+
+   * factor() now uses order() to sort its levels, not sort.list().
+ This makes factor() support custom vector-like objects if methods
+ for the appropriate generics are defined. This change has the
+ side effect of making factor() succeed on empty or length-one
+ non-atomic vector(-like) types (e.g., list), where it failed
+ before.
+
+ NEW FEATURES:
+
+   * User errors such as integrate(f, 0:1, 2) are now caught.
+
+   * Add signature argument to debug(), debugonce(), undebug() and
+ isdebugged() for more conveniently debugging S3 and S4 methods.
+ (Based on a patch by Gabe Becker.)
+
+   * Add utils::debugcall() and utils::undebugcall() for debugging the
+ function that would be called by evaluating the given expression.
+ When the call is to an S4 generic or standard S3 generic,
+ debugcall() debugs the method that 

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2017-04-20 20:58:45

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Thu Apr 20 20:58:45 2017 rev:52 rq:489054 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2017-03-12 
20:02:39.277179355 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2017-04-20 
20:58:46.633552828 +0200
@@ -1,0 +2,19 @@
+Tue Apr 18 08:27:14 UTC 2017 - detlef.ste...@gmx.de
+
+- And again that ldconfig call. Newline was obviously wrong.
+  Hopefully correct now. 
+
+---
+Tue Apr  4 09:12:24 UTC 2017 - detlef.ste...@gmx.de
+
+- Jan Engelhardt  asked for reverting the change
+  to the ldconfig call. So be it.
+
+---
+Tue Mar 21 12:19:32 UTC 2017 - detlef.ste...@gmx.de
+
+- improvements for
+  a) calling /sbin/ldconfig, which no longer gives a warning
+  b) unregistering info-pages in %preun instead of %postun 
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.WUrHZ2/_old  2017-04-20 20:58:47.697402376 +0200
+++ /var/tmp/diff_new_pack.WUrHZ2/_new  2017-04-20 20:58:47.701401810 +0200
@@ -396,6 +396,7 @@
 %defattr(-, root, root)
 %dir %{_libdir}/R
 %{_libdir}/R/lib/
+
 #ld.so.conf
 %config /etc/ld.so.conf.d/R.conf
 
@@ -403,7 +404,6 @@
 
 %postun -n R-core-libs -p /sbin/ldconfig
 
-# R-core-doc
 %package -n R-core-doc
 Summary:Package provides all documentation of R base. PDFs, man pages, 
info pages
 Group:  Documentation/Other
@@ -424,7 +424,7 @@
 %install_info --info-dir=%{_infodir} %{_infodir}/R-ints.info.gz
 %endif
 
-%postun -n R-core-doc
+%preun -n R-core-doc
 %if 0%{?suse_version} != 1315
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-exts.info-1.gz
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-FAQ.info.gz

commit R-base for openSUSE:Factory

[root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2017-03-12 20:02:37

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Sun Mar 12 20:02:37 2017 rev:51 rq:477409 version:unknown

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2016-11-01 
09:59:06.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2017-03-12 
20:02:39.277179355 +0100
@@ -1,0 +2,109 @@
+Tue Mar  7 08:25:48 UTC 2017 - detlef.ste...@gmx.de
+
+- a change in OBS now requires a BuildRequire: shadow for
+  some openSUSE releases.
+
+---
+Mon Mar  6 11:36:54 UTC 2017 - detlef.ste...@gmx.de
+
+- upstream release 3.3.3
+
+- Most important changes
+  CHANGES IN R 3.3.3:
+
+  NEW FEATURES:
+
+* Changes when redirection of a http:// URL to a https:// URL is
+  encountered:
+
+* The internal methods of download.file() and url() now report
+  that they cannot follow this (rather than failing silently).
+
+* (Unix-alike) download.file(method = "auto") (the default)
+  re-tries with method = "libcurl".
+
+* (Unix-alike) url(method = "default") with an explicit open
+  argument re-tries with method = "libcurl".  This covers many
+  of the usages, e.g. readLines() with a URL argument.
+
+  INSTALLATION on a UNIX-ALIKE:
+
+* The configure check for the zlib version is now robust to
+  versions longer than 5 characters, including 1.2.11.
+
+  UTILITIES:
+
+* Environmental variable _R_CHECK_TESTS_NLINES_ controls how R CMD
+  check reports failing tests (see SS8 of the 'R Internals' manual).
+
+  DEPRECATED AND DEFUNCT:
+
+* (C-level Native routine registration.)  The undocumented styles
+  field of the components of R_CMethodDef and R_FortranMethodDef is
+  deprecated.
+
+  BUG FIXES:
+
+* vapply(x, *) now works with long vectors x.  (PR#17174)
+
+* isS3method("is.na.data.frame") and similar are correct now.
+  (PR#17171)
+
+* grepRaw(, , fixed = TRUE) now works, thanks to a
+  patch by Mikko Korpela.  (PR#17132)
+
+* Package installation into a library where the package exists
+  _via_ symbolic link now should work wherever Sys.readlink()
+  works, resolving PR#16725.
+
+* "Cincinnati" was missing an "n" in the precip dataset.
+
+* Fix buffer overflow vulnerability in pdf() when loading an
+  encoding file.  Reported by Talos (TALOS-2016-0227).
+
+* getDLLRegisteredRoutines() now produces its warning correctly
+  when multiple DLLs match, thanks to Matt Dowle's PR#17184.
+
+* Sys.timezone() now returns non-NA also on platforms such as
+  Ubuntu 14.04.5 LTS, thanks to Mikko Korpela's PR#17186.
+
+* format(x) for an illegal "POSIXlt" object x no longer segfaults.
+
+* methods(f) now also works for f "(" or "{".
+
+* (Windows only) dir.create() did not check the length of the path
+  to create, and so could overflow a buffer and crash R.
+  (PR#17206)
+
+* On some systems, very small hexadecimal numbers in hex notation
+  would underflow to zero.  (PR#17199)
+
+* pmin() and pmax() now work again for ordered factors and 0-length
+  S3 classed objects, thanks to Suharto Anggono's PR#17195 and
+  PR#17200.
+
+* bug.report() did not do any validity checking on a package's
+  BugReports field.  It now ignores an empty field, removes leading
+  whitespace and only attempts to open http:// and https:// URLs,
+  falling back to emailing the maintainer.
+
+* Bandwidth selectors bw.ucv() and bw.SJ() gave incorrect answers
+  or incorrectly reported an error (because of integer overflow)
+  for inputs longer than 46341.  Similarly for bw.bcv() at length
+  5793.
+
+  Another possible integer overflow is checked and may result in an
+  error report (rather than an incorrect result) for much longer
+  inputs (millions for a smooth distribution).
+
+* findMethod() failed if the active signature had expanded beyond
+  what a particular package used. (Example with packages XR and
+  XRJulia on CRAN.)
+
+* qbeta() underflowed too early in some very asymmetric cases.
+  (PR#17178)
+
+* R CMD Rd2pdf had problems with packages with non-ASCII titles in
+  .Rd files (usually the titles were omitted).
+
+---

Old:

  R-3.3.2.tar.bz2

New:

  R-3.3.3.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.wba0gL/_old  2017-03-12 20:02:40.624988639 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2016-11-01 09:59:04

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2016-07-12 
23:51:35.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2016-11-01 
09:59:06.0 +0100
@@ -1,0 +2,161 @@
+Mon Oct 31 11:50:08 UTC 2016 - detlef.ste...@gmx.de
+
+- upstream release 3.3.2
+
+- Most important changes
+  CHANGES IN R 3.3.2:
+
+  NEW FEATURES:
+
+* extSoftVersion() now reports the version (if any) of the readline
+  library in use.
+
+* The version of LAPACK included in the sources has been updated to
+  3.6.1, a bug-fix release including a speedup for the
+  non-symmetric case of eigen().
+
+* Use options(deparse.max.lines=) to limit the number of lines
+  recorded in .Traceback and other deparsing activities.
+
+* format() looks more regular, also for non-character atomic
+  matrices.
+
+* abbreviate() gains an option named = TRUE.
+
+* The online documentation for package methods is extensively
+  rewritten.  The goals are to simplify documentation for basic
+  use, to note old features not recommended and to correct
+  out-of-date information.
+
+* Calls to setMethod() no longer print a message when creating a
+  generic function in those cases where that is natural: S3
+  generics and primitives.
+
+  INSTALLATION and INCLUDED SOFTWARE:
+
+* Versions of the readline library >= 6.3 had been changed so that
+  terminal window resizes were not signalled to readline: code has
+  been added using a explicit signal handler to work around that
+  (when R is compiled against readline >= 6.3).  (PR#16604)
+
+* configure works better with Oracle Developer Studio 12.5.
+
+  UTILITIES:
+
+* R CMD check reports more dubious flags in files
+  src/Makevars[.in], including -w and -g.
+
+* R CMD check has been set up to filter important warnings from
+  recent versions of gfortran with -Wall -pedantic: this now
+  reports non-portable GNU extensions such as out-of-order
+  declarations.
+
+* R CMD config works better with paths containing spaces, even
+  those of home directories (as reported by Ken Beath).
+
+  DEPRECATED AND DEFUNCT:
+
+* Use of the C/C++ macro NO_C_HEADERS is deprecated (no C headers
+  are included by R headers from C++ as from R 3.3.0, so it should
+  no longer be needed).
+
+  BUG FIXES:
+
+* The check for non-portable flags in R CMD check could be stymied
+  by src/Makevars files which contained targets.
+
+* (Windows only) When using certain desktop themes in Windows 7 or
+  higher, Alt-Tab could cause Rterm to stop accepting input.
+  (PR#14406; patch submitted by Jan Gleixner.)
+
+* pretty(d, ..) behaves better for date-time d (PR#16923).
+
+* When an S4 class name matches multiple classes in the S4 cache,
+  perform a dynamic search in order to obey namespace imports.
+  This should eliminate annoying messages about multiple hits in
+  the class cache.  Also, pass along the package from the
+  ClassExtends object when looking up superclasses in the cache.
+
+* sample(NA_real_) now works.
+
+* Packages using non-ASCII encodings in their code did not install
+  data properly on systems using different encodings.
+
+* merge(df1, df2) now also works for data frames with column names
+  "na.last", "decreasing", or "method".  (PR#17119)
+
+* contour() caused a segfault if the labels argument had length
+  zero.  (Reported by Bill Dunlap.)
+
+* unique(warnings()) works more correctly, thanks to a new
+  duplicated.warnings() method.
+
+* findInterval(x, vec = numeric(), all.inside = TRUE) now returns
+  0s as documented.  (Reported by Bill Dunlap.)
+
+* (Windows only) R CMD SHLIB failed when a symbol in the resulting
+  library had the same name as a keyword in the .def file.
+  (PR#17130)
+
+* pmax() and pmin() now work with (more ?)  classed objects, such
+  as "Matrix" from the Matrix package, as documented for a long
+  time.
+
+* axis(side, x = D) and hence Axis() and plot() now work correctly
+  for "Date" and time objects D, even when "time goes backward",
+  e.g., with decreasing xlim.  (Reported by William May.)
+
+* str(I(matrix(..))) now looks as always intended.
+
+* plot.ts(), the plot() method for time series, now respects cex,
+  lwd and lty.  (Reported by Greg Werbin.)
+
+* parallel::mccollect() now returns a named list (as documented)
+  when called with wait = FALSE.  (Reported by 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2016-07-12 23:51:27

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2016-06-25 
02:22:30.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2016-07-12 
23:51:35.0 +0200
@@ -1,0 +2,5 @@
+Fri Jul  1 16:17:11 UTC 2016 - toddrme2...@gmail.com
+
+- Fix typo in Group tag.
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.BaRgX0/_old  2016-07-12 23:51:36.0 +0200
+++ /var/tmp/diff_new_pack.BaRgX0/_new  2016-07-12 23:51:36.0 +0200
@@ -154,7 +154,7 @@
 
 %package -n R-base-devel
 Summary:Metapackage, requires R-core-devel, R-core-libs, R-Matrix-devel
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Version:%{Rversion}
 Release:%release
 Requires:   R-Matrix-devel
@@ -452,7 +452,7 @@
 
 %package -n R-core-packages
 Summary:Metapackage, requires all core Packages
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Version:%{Rversion}
 Release:%release
 Requires:   R-compiler
@@ -478,7 +478,7 @@
 
 %package -n R-compiler
 Summary:Package providing R-core packages R-compiler
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 #Provides:   R-compiler = %{version}
 Requires:   R-base = %{version}
 
@@ -511,7 +511,7 @@
 
 %package -n R-datasets
 Summary:Package providing R-core datasets in R-datasets
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-datasets
@@ -532,7 +532,7 @@
 
 %package -n R-grDevices
 Summary:Package providing R-core graphics devices in R-grDevices
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-grDevices
@@ -586,7 +586,7 @@
 
 %package -n R-graphics
 Summary:Package providing R-core graphics in R-graphics
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-graphics
@@ -637,7 +637,7 @@
 
 %package -n R-grid
 Summary:Package providing R-grid graphics in R-grid
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-grid
@@ -683,7 +683,7 @@
 
 %package -n R-methods
 Summary:Package providing R-methods
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-methods
@@ -727,7 +727,7 @@
 
 %package -n R-parallel
 Summary:Package providing R-parallel
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-parallel
@@ -789,7 +789,7 @@
 
 %package -n R-splines
 Summary:Package providing R-splines
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-splines
@@ -833,7 +833,7 @@
 
 %package -n R-stats
 Summary:Package providing R-stats
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-stats
@@ -883,7 +883,7 @@
 # stats4
 %package -n R-stats4
 Summary:Package providing R-stats4
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-stats4
@@ -918,7 +918,7 @@
 
 %package -n R-tcltk
 Summary:Package providing R-tcltk
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-tcltk
@@ -964,7 +964,7 @@
 # tools
 %package -n R-tools
 Summary:Package providing R-tools
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-tools
@@ -1011,7 +1011,7 @@
 
 %package -n R-utils
 Summary:Package providing R-utils
-Group:  Developement/Libraries/Other
+Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
 
 %description -n R-utils
@@ -1055,7 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2016-06-25 02:22:09

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2016-05-23 
16:38:49.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2016-06-25 
02:22:30.0 +0200
@@ -1,0 +2,45 @@
+Tue Jun 21 09:26:17 UTC 2016 - detlef.ste...@gmx.de
+
+- upstream release 3.3.1
+
+- Most important changes
+  CHANGES IN R 3.3.1:
+
+  BUG FIXES:
+
+* R CMD INSTALL and hence install.packages() gave an internal error
+  installing a package called description from a tarball on a
+  case-insensitive file system.
+
+* match(x, t) (and hence x %in% t) failed when x was of length one,
+  and either character and x and t only differed in their Encoding
+  or when x and t where complex with NAs or NaNs.  (PR#16885.)
+
+* unloadNamespace(ns) also works again when ns is a 'namespace', as
+  from getNamespace().
+
+* rgamma(1,Inf) or rgamma(1, 0,0) no longer give NaN but the
+  correct limit.
+
+* length(baseenv()) is correct now.
+
+* pretty(d, ..) for date-time d rarely failed when "halfmonth" time
+  steps were tried (PR#16923) and on 'inaccurate' platforms such as
+  32-bit windows or a configuration with --disable-long-double; see
+  comment #15 of PR#16761.
+
+* In text.default(x, y, labels), the rarely(?) used default for
+  labels is now correct also for the case of a 2-column matrix x
+  and missing y.
+* as.factor(c(a = 1L)) preserves names() again as in R < 3.1.0.
+
+* strtrim(""[0], 0[0]) now works.
+
+* Use of Ctrl-C to terminate a reverse incremental search started
+  by Ctrl-R in the readline-based Unix terminal interface is now
+  supported for readline >= 6.3 (Ctrl-G always worked).  (PR#16603)
+
+* diff() now keeps the "units" attribute, as subtraction
+  already did, PR#16940.
+
+---

Old:

  R-3.3.0.tar.bz2

New:

  R-3.3.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.c4GInL/_old  2016-06-25 02:22:31.0 +0200
+++ /var/tmp/diff_new_pack.c4GInL/_new  2016-06-25 02:22:31.0 +0200
@@ -19,7 +19,7 @@
 %define release 1
 
 Name:   R-base
-Version:3.3.0
+Version:3.3.1
 Release:%release
 %define Rversion %{version}
 Source: R-%{version}.tar.bz2
@@ -1438,7 +1438,7 @@
 %package -n R-nlme
 Summary:Package provides recommended R-nlme
 Group:  Developement/Libraries/Other
-Version:3.1.127
+Version:3.1.128
 Release:%release
 Requires:   R-base
 
@@ -1456,6 +1456,7 @@
 %{_libdir}/R/library/nlme/html/
 %{_libdir}/R/library/nlme/INDEX
 %{_libdir}/R/library/nlme/libs/
+%{_libdir}/R/library/nlme/LICENCE
 %{_libdir}/R/library/nlme/Meta/
 %{_libdir}/R/library/nlme/mlbook/
 %{_libdir}/R/library/nlme/NAMESPACE
@@ -1578,7 +1579,7 @@
 %package -n R-survival
 Summary:Package provides recommended R-survival
 Group:  Developement/Libraries/Other
-Version:2.39.2
+Version:2.39.4
 Release:%release
 Requires:   R-base
 

++ R-3.3.0.tar.bz2 -> R-3.3.1.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-3.3.0.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-3.3.1.tar.bz2 differ: char 11, line 1

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2016-05-23 16:38:47

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2016-04-15 
19:12:21.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2016-05-23 
16:38:49.0 +0200
@@ -1,0 +2,343 @@
+Wed May 18 07:58:59 UTC 2016 - detlef.ste...@gmx.de
+
+- further cleanup of spec file.
+  Removed unneeded explicit Requires for
+  libcairo2/libfreetype6/liblzma5/libreadline6
+  Removed removal of backup file that was meanwhile removed upstream.
+  
+---
+Wed May 11 14:36:53 UTC 2016 - detlef.ste...@gmx.de
+
+- clean up of spec file after comments from  Jan Engelhardt in 
+  https://build.opensuse.org/request/show/393426
+
+  Some unneeded explicit BuildRequires removed. 
+
+---
+Tue May  3 13:31:13 UTC 2016 - detlef.ste...@gmx.de
+
+- tre.patch was removed.  
+
+---
+Tue May  3 11:30:09 UTC 2016 - detlef.ste...@gmx.de
+
+- and libbz2-devel needed, too.
+  
+---
+Tue May  3 11:00:15 UTC 2016 - detlef.ste...@gmx.de
+
+- added BuildRequires: bzip2
+  for i586.
+
+---
+Tue May  3 10:24:09 UTC 2016 - detlef.ste...@gmx.de
+
+- upstream release 3.3.0
+
+  CHANGES IN R 3.3.0:
+
+  SIGNIFICANT USER-VISIBLE CHANGES:
+
+* nchar(x, *)'s argument keepNA governing how the result for NAs in
+  x is determined, gets a new default keepNA = NA which returns NA
+  where x is NA, except for type = "width" which still returns 2,
+  the formatting / printing width of NA.
+
+* All builds have support for https: URLs in the default methods
+  for download.file(), url() and code making use of them.
+
+  Unfortunately that cannot guarantee that any particular https:
+  URL can be accessed.  For example, server and client have to
+  successfully negotiate a cryptographic protocol (TLS/SSL, ...)
+  and the server's identity has to be verifiable _via_ the
+  available certificates.  Different access methods may allow
+  different protocols or use private certificate bundles: we
+  encountered a https: CRAN mirror which could be accessed by one
+  browser but not by another nor by download.file() on the same
+  Linux machine.
+
+  NEW FEATURES:
+
+* The print method for methods() gains a byclass argument.
+
+* New functions validEnc() and validUTF8() to give access to the
+  validity checks for inputs used by grep() and friends.
+
+* Experimental new functionality for S3 method checking, notably
+  isS3method().
+
+  Also, the names of the R 'language elements' are exported as
+  character vector tools::langElts.
+
+* str(x) now displays "Time-Series" also for matrix (multivariate)
+  time-series, i.e. when is.ts(x) is true.
+
+* (Windows only) The GUI menu item to install local packages now
+  accepts *.tar.gz files as well as *.zip files (but defaults to
+  the latter).
+
+* New programmeR's utility function chkDots().
+
+* D() now signals an error when given invalid input, rather than
+  silently returning NA.  (Request of John Nash.)
+
+* formula objects are slightly more "first class": e.g., formula()
+  or new("formula", y ~ x) are now valid.  Similarly, for "table",
+  "ordered" and "summary.table".  Packages defining S4 classes with
+  the above S3/S4 classes as slots should be reinstalled.
+
+* New function strrep() for repeating the elements of a character
+  vector.
+
+* rapply() preserves attributes on the list when how = "replace".
+
+* New S3 generic function sigma() with methods for extracting the
+  estimated standard deviation aka "residual standard deviation"
+  from a fitted model.
+
+* news() now displays R and package news files within the HTML help
+  system if it is available.  If no news file is found, a visible
+  NULL is returned to the console.
+
+* as.raster(x) now also accepts raw arrays x assuming values in
+  0:255.
+
+* Subscripting of matrix/array objects of type "expression" is now
+  supported.
+
+* type.convert("i") now returns a factor instead of a complex value
+  with zero real part and missing imaginary part.
+
+* Graphics devices cairo_pdf() and cairo_ps() now allow non-default
+  values of the cairographics 'fallback resolution' to be set.
+
+  This now 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2016-04-15 19:12:20

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2016-03-29 
09:56:24.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2016-04-15 
19:12:21.0 +0200
@@ -1,0 +2,14 @@
+Fri Apr 15 08:40:10 UTC 2016 - detlef.ste...@gmx.de
+
+- CHANGES IN R 3.2.5:
+
+  BUG FIXES:
+
+• format.POSIXlt() behaved incorrectly in R 3.2.4.  E.g. the output
+  of format(as.POSIXlt(paste0(1940:2000,"-01-01"), tz = "CET"),
+  usetz = TRUE) ended in two "CEST" time formats.
+
+• A typo in the Makefile for src/extra/xz prevented builds of
+  liblzma.a. (Notice that this will become unbundled in 3.3.0.) 
+
+---

Old:

  R-3.2.4.1.tar.bz2

New:

  R-3.2.5.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.W6ThcE/_old  2016-04-15 19:12:23.0 +0200
+++ /var/tmp/diff_new_pack.W6ThcE/_new  2016-04-15 19:12:23.0 +0200
@@ -19,7 +19,7 @@
 %define release 1
 
 Name:   R-base
-Version:3.2.4.1
+Version:3.2.5
 Release:%release
 %define Rversion %{version}
 Source: R-%{version}.tar.bz2

++ R-3.2.4.1.tar.bz2 -> R-3.2.5.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-3.2.4.1.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-3.2.5.tar.bz2 differ: char 11, line 1

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2016-03-29 09:56:20

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2015-12-16 
17:42:44.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2016-03-29 
09:56:24.0 +0200
@@ -1,0 +2,134 @@
+Thu Mar 17 09:32:01 UTC 2016 - detlef.ste...@gmx.de
+
+- upstrem releases minorst bug fix release
+  NEWS: The 3.2.4 release had two annoyances which we would rather 
+  not have in an "ultra-stable" release, designed to hang around 
+  for the duration of the 3.3 series. One was a relatively minor 
+  Makefile issue affecting system using R's bundled lzma library. 
+  The other, rather more serious, affected printing and formatting 
+  of POSIXlt objects, which would unpredictably get the Daylight 
+  Savings Time wrong. 
+
+---
+Fri Mar 11 15:53:46 UTC 2016 - detlef.ste...@gmx.de
+
+- Some version numbers of recommended packages corrected 
+
+---
+Fri Mar 11 15:38:35 UTC 2016 - detlef.ste...@gmx.de
+
+- Release numbers for sub-packages improved
+
+---
+Fri Mar 11 09:58:13 UTC 2016 - detlef.ste...@gmx.de
+
+- added MakefileTypo.patch to enable building for 12.2
+  was a one charcter show stopper 
+
+---
+Thu Mar 10 12:52:04 UTC 2016 - detlef.ste...@gmx.de
+
+- upstream release 3.2.4, only minor improvements
+CHANGES IN R 3.2.4:
+
+  NEW FEATURES:
+
+• install.packages() and related functions now give a more
+  informative warning when an attempt is made to install a base
+  package.
+
+• summary(x) now prints with less rounding when x contains infinite
+  values. (Request of PR#16620.)
+
+• provideDimnames() gets an optional unique argument.
+
+• shQuote() gains type = "cmd2" for quoting in cmd.exe in Windows.
+  (Response to PR#16636.)
+
+• The data.frame method of rbind() gains an optional argument
+  stringsAsFactors (instead of only depending on
+  getOption("stringsAsFactors")).
+
+• smooth(x, *) now also works for long vectors.
+
+• tools::texi2dvi() has a workaround for problems with the texi2dvi
+  script supplied by texinfo 6.1.
+
+  It extracts more error messages from the LaTeX logs when in
+  emulation mode.
+
+  UTILITIES:
+
+• R CMD check will leave a log file build_vignettes.log from the
+  re-building of vignettes in the .Rcheck directory if there is a
+  problem, and always if environment variable
+  _R_CHECK_ALWAYS_LOG_VIGNETTE_OUTPUT_ is set to a true value.
+
+  DEPRECATED AND DEFUNCT:
+
+• Use of SUPPORT_OPENMP from header Rconfig.h is deprecated in
+  favour of the standard OpenMP define _OPENMP.
+
+  (This has been the recommendation in the manual for a while now.)
+
+• The make macro AWK which is long unused by R itself but recorded
+  in file etc/Makeconf is deprecated and will be removed in R
+  3.3.0.
+
+• The C header file S.h is no longer documented: its use should be
+  replaced by R.h.
+
+---
+Mon Mar  7 12:54:57 UTC 2016 - detlef.ste...@gmx.de
+
+- The big split up. What was a monolithic R-base*rpm now is 
+  divided over 30 something packages, with the following layout.
+
+  R-base-3.2.3: dummy packages, contains all of R
+  Use R-base, if you don´t have a good understandig what it means 
+  to install only parts of it!
+  
+  R-base-devel-3.2.3: dummy, contains R-core-devel
+  R-core-3.2.3: R core, no packages at all
+  R-core-devel-3.2.3: devel files
+  R-core-libs-3.2.3: contains Rlib
+  R-core-doc-3.2.3: all the documentation of R-core
+
+  R-core-packages-3.2.3: dummy package to load all core packages, that are
+R-compiler-3.2.3,
+R-datasets-3.2.3,
+R-grDevices-3.2.3,
+R-graphics-3.2.3,
+R-grid-3.2.3,
+R-methods-3.2.3,
+R-parallel-3.2.3,
+R-splines-3.2.3,
+R-stats-3.2.3,
+R-stats4-3.2.3,
+R-tcltk-3.2.3,
+R-tools-3.2.3,
+R-utils-3.2.3.
+
+  Each of these packages may be installed alone.
+  
+  R-recommended-packages-3.2.3: dummy package to load all recommeded 
+packages, that are
+R-boot-1.3.17,
+R-class-7.3.14,
+R-cluster-2.0.3,
+R-codetools-0.2.14,
+R-foreign-0.8.66,
+R-KernSmooth-2.23.15,
+R-lattice-0.20.33,
+R-MASS-7.3.45,
+ 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2015-12-16 17:42:38

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is "R-base"

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2015-08-27 
08:56:03.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2015-12-16 
17:42:44.0 +0100
@@ -1,0 +2,239 @@
+Fri Dec 11 08:46:52 UTC 2015 - detlef.ste...@gmx.de
+
+- Upstream release R-3.2.3
+
+  CHANGES IN R 3.2.3:
+
+  NEW FEATURES:
+
+* Some recently-added Windows time zone names have been added to
+  the conversion table used to convert these to Olson names.
+  (Including those relating to changes for Russia in Oct 2014, as
+  in PR#16503.)
+
+* (Windows) Compatibility information has been added to the
+  manifests for Rgui.exe, Rterm.exe and Rscript.exe.  This should
+  allow win.version() and Sys.info() to report the actual Windows
+  version up to Windows 10.
+
+* Windows "wininet" FTP first tries EPSV / PASV mode rather than
+  only using active mode (reported by Dan Tenenbaum).
+
+* which.min(x) and which.max(x) may be much faster for logical and
+  integer x and now also work for long vectors.
+
+* The 'emulation' part of tools::texi2dvi() has been somewhat
+  enhanced, including supporting quiet = TRUE.  It can be selected
+  by texi2dvi = "emulation".
+
+  (Windows) MiKTeX removed its texi2dvi.exe command in Sept 2015:
+  tools::texi2dvi() tries texify.exe if it is not found.
+
+* (Windows only) Shortcuts for printing and saving have been added
+  to menus in Rgui.exe.  (Request of PR#16572.)
+
+* loess(..., iterTrace=TRUE) now provides diagnostics for
+  robustness iterations, and the print() method for
+  summary() shows slightly more.
+
+* The included version of PCRE has been updated to 8.38, a bug-fix
+  release.
+
+* View() now displays nested data frames in a more friendly way.
+  (Request with patch in PR#15915.)
+
+  INSTALLATION and INCLUDED SOFTWARE:
+
+* The included configuration code for libintl has been updated to
+  that from gettext version 0.19.5.1 - this should only affect how
+  an external library is detected (and the only known instance is
+  under OpenBSD).  (Wish of PR#16464.)
+
+* configure has a new argument --disable-java to disable the checks
+  for Java.
+
+* The configure default for MAIN_LDFLAGS has been changed for the
+  FreeBSD, NetBSD and Hurd OSes to one more likely to work with
+  compilers other than gcc (FreeBSD 10 defaults to clang).
+
+* configure now supports the OpenMP flags -fopenmp=libomp (clang)
+  and -qopenmp (Intel C).
+
+* Various macros can be set to override the default behaviour of
+  configure when detecting OpenMP: see file config.site.
+
+* Source installation on Windows has been modified to allow for
+  MiKTeX installations without texi2dvi.exe.  See file
+  MkRules.dist.
+
+  BUG FIXES:
+
+* regexpr(pat, x, perl = TRUE) with Python-style named capture did
+  not work correctly when x contained NA strings.  (PR#16484)
+
+* The description of dataset ToothGrowth has been
+  improved/corrected.  (PR#15953)
+
+* model.tables(type = "means") and hence TukeyHSD() now support
+  "aov" fits without an intercept term.  (PR#16437)
+
+* close() now reports the status of a pipe() connection opened with
+  an explicit open argument.  (PR#16481)
+
+* Coercing a list without names to a data frame is faster if the
+  elements are very long. (PR#16467)
+
+* (Unix-only) Under some rare circumstances piping the output from
+  Rscript or R -f could result in attempting to close the input
+  file twice, possibly crashing the process.  (PR#16500)
+
+* (Windows) Sys.info() was out of step with win.version() and did
+  not report Windows 8.
+
+* topenv(baseenv()) returns baseenv() again as in R 3.1.0 and
+  earlier.  This also fixes compilerJIT(3) when used in .Rprofile.
+
+* detach()ing the methods package keeps .isMethodsDispatchOn()
+  true, as long as the methods namespace is not unloaded.
+
+* Removed some spurious warnings from configure about the
+  preprocessor not finding header files.  (PR#15989)
+
+* rchisq(*, df=0, ncp=0) now returns 0 instead of NaN, and
+  dchisq(*, df=0, ncp=*) also no longer returns NaN in limit cases
+  (where the limit is unique).  (PR#16521)
+
+* pchisq(*, df=0, ncp > 0, log.p=TRUE) no longer underflows (for
+  ncp > ~60).
+
+* nchar(x, "w") returned -1 for characters it did not know about
+  (e.g. zero-width spaces): it now assumes 1.  It 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2015-08-27 08:55:58

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2015-08-19 
09:29:48.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2015-08-27 
08:56:03.0 +0200
@@ -1,0 +2,5 @@
+Wed Aug 19 08:47:27 UTC 2015 - badshah...@gmail.com
+
+- Disable building man files for openSUSE:42.
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.0a9j0z/_old  2015-08-27 08:56:04.0 +0200
+++ /var/tmp/diff_new_pack.0a9j0z/_new  2015-08-27 08:56:04.0 +0200
@@ -75,7 +75,9 @@
 %endif
 BuildRequires:  pango-devel
 BuildRequires:  tcl-devel
+%if 0%{?suse_version} != 1315
 BuildRequires:  texinfo = 5.1
+%endif
 BuildRequires:  tk-devel
 BuildRequires:  xorg-x11-devel
 Requires:   R-base-devel = %{version}
@@ -149,12 +151,14 @@
 
 make %{?_smp_mflags}
 make pdf
+%if 0%{?suse_version} != 1315
 make info
 # Convert to UTF-8
 for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ 
doc/manual/R-admin.info doc/manual/R-exts.info-1; do
   iconv -f iso-8859-1 -t utf-8 -o $i{.utf8,}
   mv $i{.utf8,}
 done
+%endif
 
 %install 
 make DESTDIR=%{buildroot} install
@@ -162,9 +166,11 @@
 
 # Installation of Info-files
 %{__install} -m 755 -d %{_infodir}
+%if 0%{?suse_version} != 1315
 make DESTDIR=%{buildroot} INFODIR=%{buildroot}%{_infodir} install-info
 %{__rm} -f %{buildroot}%{_infodir}/dir
 %{__rm} -f %{buildroot}%{_infodir}/dir.old
+%endif
 
 chmod +x %{buildroot}%{_libdir}/R/share/sh/echo.sh
 
@@ -185,6 +191,7 @@
 
 %post
 /sbin/ldconfig
+%if 0%{?suse_version} != 1315
 %install_info --info-dir=%{_infodir} %{_infodir}/R-exts.info-1.gz
 %install_info --info-dir=%{_infodir} %{_infodir}/R-FAQ.info.gz
 %install_info --info-dir=%{_infodir} %{_infodir}/R-lang.info.gz
@@ -194,9 +201,11 @@
 %install_info --info-dir=%{_infodir} %{_infodir}/R-data.info.gz
 %install_info --info-dir=%{_infodir} %{_infodir}/R-exts.info.gz
 %install_info --info-dir=%{_infodir} %{_infodir}/R-ints.info.gz
+%endif
 
 %postun
 /sbin/ldconfig
+%if 0%{?suse_version} != 1315
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-exts.info-1.gz
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-FAQ.info.gz
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-lang.info.gz
@@ -206,6 +215,7 @@
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-data.info.gz
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-exts.info.gz
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-ints.info.gz
+%endif
 
 %files -n R-base
 %defattr(-, root, root)
@@ -996,7 +1006,9 @@
 %{_mandir}/man1/Rscript.1*
 %doc %{_libdir}/R/COPYING
 %doc %{_libdir}/R/SVN-REVISION
+%if 0%{?suse_version} != 1315
 %{_infodir}/*.gz
+%endif
 %doc %{_libdir}/R/doc/
 %dir %{_libdir}/R
 %{_bindir}/*

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2015-08-19 09:29:42

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2015-06-23 
11:57:09.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2015-08-19 
09:29:48.0 +0200
@@ -1,0 +2,145 @@
+Mon Aug 17 14:41:24 UTC 2015 - detlef.ste...@gmx.de
+
+- Upstream release 3.2.2
+- Most important
+CHANGES IN R 3.2.2:
+
+  SIGNIFICANT USER-VISIBLE CHANGES:
+
+* It is now easier to use secure downloads from https:// URLs on
+  builds which support them: no longer do non-default options need
+  to be selected to do so.  In particular, packages can be
+  installed from repositories which offer https:// URLs, and those
+  listed by setRepositories() now do so (for some of their
+  mirrors).
+
+  Support for https:// URLs is available on Windows, and on other
+  platforms if support for libcurl was compiled in and if that
+  supports the https protocol (system installations can be expected
+  to do).  So https:// support can be expected except on rather old
+  OSes (an example being OS X 'Snow Leopard', where a non-system
+  version of libcurl can be used).
+
+  (Windows only) The default method for accessing URLs _via_
+  download.file() and url() has been changed to be wininet using
+  Windows API calls.  This changes the way proxies need to be set
+  and security settings made: there have been some reports of sites
+  being inaccessible under the new default method (but the previous
+  methods remain available).
+
+  NEW FEATURES:
+
+* cmdscale() gets new option list. for increased flexibility when a
+  list should be returned.
+
+* configure now supports texinfo version 6.0, which (unlike the
+  change from 4.x to 5.0) is a minor update.  (Wish of PR#16456.)
+
+* (Non-Windows only) download.file() with default method = auto
+  now chooses libcurl if that is available and a https:// or
+  ftps:// URL is used.
+
+* (Windows only) setInternet2(TRUE) is now the default.  The
+  command-line option --internet2 and environment variable
+  R_WIN_INTERNET2 are now ignored.
+
+  Thus by default the internal method for download.file() and
+  url() uses the wininet method: to revert to the previous
+  default use setInternet2(FALSE).
+
+  This means that https:// can be read by default by
+  download.file() (they have been readable by file() and url()
+  since R 3.2.0).
+
+  There are implications for how proxies need to be set (see
+  ?download.file): also, cacheOK = FALSE is not supported.
+
+* chooseCRANmirror() and chooseBioCmirror() now offer HTTPS mirrors
+  in preference to HTTP mirrors.  This changes the interpretation
+  of their ind arguments: see their help pages.
+
+* capture.output() gets optional arguments type and split to pass
+  to sink(), and hence can be used to capture messages.
+
+  C-LEVEL FACILITIES:
+
+* Header Rconfig.h now defines HAVE_ALLOCA_H if the platform has
+  the alloca.h header (it is needed to define alloca on Solaris and
+  AIX, at least: see 'Writing R Extensions' for how to use it).
+
+  INSTALLATION and INCLUDED SOFTWARE:
+
+* The libtool script generated by configure has been modified to
+  support FreeBSD = 10 (PR#16410).
+
+  BUG FIXES:
+
+* The HTML help page links to demo code failed due to a change in R
+  3.2.0.  (PR#16432)
+
+* If the na.action argument was used in model.frame(), the original
+  data could be modified. (PR#16436)
+
+* getGraphicsEvent() could cause a crash if a graphics window was
+  closed while it was in use. (PR#16438)
+
+* matrix(x, nr, nc, byrow = TRUE) failed if x was an object of type
+  expression.
+
+* strptime() could overflow the allocated storage on the C stack
+  when the timezone had a non-standard format much longer than the
+  standard formats. (Part of PR#16328.)
+
+* options(OutDec = s) now signals a warning (which will become an
+  error in the future) when s is not a string with exactly one
+  character, as that has been a documented requirement.
+
+* prettyNum() gains a new option input.d.mark which together with
+  other changes, e.g., the default for decimal.mark, fixes some
+  format()ting variants with non-default getOption(OutDec) such
+  as in PR#16411.
+
+* download.packages() failed for type equal to either both or
+  binary.  (Reported by Dan Tenenbaum.)
+
+* The dendrogram method of labels() is much more efficient for
+  large dendrograms, 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2015-06-23 11:57:07

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2015-04-21 
10:52:17.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2015-06-23 
11:57:09.0 +0200
@@ -1,0 +2,120 @@
+Thu Jun 18 11:59:24 UTC 2015 - detlef.ste...@gmx.de
+
+- Upstream release 3.2.1
+- Improvement of build: include libcurl and texlive-dvips/
+  texlive-hevetic
+- Most important
+
+  CHANGES IN R 3.2.1:
+
+  NEW FEATURES:
+
+* utf8ToInt() now checks that its input is valid UTF-8 and returns
+  NA if it is not.
+
+* install.packages() now allows type = both with repos = NULL if
+  it can infer the type of file.
+
+* nchar(x, *) and nzchar(x) gain a new argument keepNA which
+  governs how the result for NAs in x is determined.  For the R
+  3.2.x series, the default remains FALSE which is fully back
+  compatible.  From R 3.3.0, the default will change to keepNA = NA
+  and you are advised to consider this for code portability.
+
+* news() more flexibly extracts dates from package NEWS.Rd files.
+
+* lengths(x) now also works (trivially) for atomic x and hence can
+  be used more generally as an efficient replacement of sapply(x,
+  length) and similar.
+
+* The included version of PCRE has been updated to 8.37, a bug-fix
+  release.
+
+* diag() no longer duplicates a matrix when extracting its
+  diagonal.
+
+* as.character.srcref() gains an argument to allow characters
+  corresponding to a range of source references to be extracted.
+
+  BUG FIXES:
+
+* acf() and ccf() now guarantee values strictly in [-1,1] (instead
+  of sometimes very slightly outside). PR#15832.
+
+* as.integer() now gives NA (with a warning) as it
+  does for the corresponding numeric or negative number coercions.
+  Further, as.integer(M + 0.1) now gives M (instead of NA) when M
+  is the maximal representable integer.
+
+* On some platforms nchar(x, c) and nchar(x, w) would return
+  values (possibly NA) for inputs which were declared to be UTF-8
+  but were not, or for invalid strings without a marked encoding in
+  a multi-byte locale, rather than give an error.  Additional
+  checks have been added to mitigate this.
+
+* apply(a, M, function(u) c(X = ., Y = .)) again has dimnames
+  containing X and Y (as in R  3.2.0).
+
+* (Windows only) In some cases, the --clean option to R CMD INSTALL
+  could fail.  (PR#16178)
+
+* (Windows only) choose.files() would occasionally include
+  characters from the result of an earlier call in the result of a
+  later one.  (PR#16270)
+
+* A change in RSiteSearch() in R 3.2.0 caused it to submit invalid
+  URLs.  (PR#16329)
+
+* Rscript and command line R silently ignored incomplete statements
+  at the end of a script; now they are reported as parse errors.
+  (PR#16350)
+
+* Parse data for very long strings was not stored.  (PR#16354)
+
+* plotNode(), the workhorse of the plot method for dendrograms is
+  no longer recursive, thanks to Suharto Anggono, and hence also
+  works for deeply nested dendrograms.  (PR#15215)
+
+* The parser could overflow internally when given numbers in
+  scientific format with extremely large exponents.  (PR#16358)
+
+* If the CRAN mirror was not set, install.packages(type = both)
+  and related functions could repeatedly query the user for it.
+  (Part of PR#16362)
+
+* The low-level functions .rowSums() etc. did not check the length
+  of their argument, so could segfault. (PR#16367)
+
+* The quietly argument of library() is now correctly propagated
+  from .getRequiredPackages2().
+
+* Under some circumstances using the internal PCRE when building R
+  fron source would cause external libs such as -llzma to be
+  omitted from the main link.
+
+* The .Primitive default methods of the logic operators, i.e., !, 
+  and |, now give correct error messages when appropriate, e.g.,
+  for ``(TRUE) or `!`().  (PR#16385)
+
+* cummax(x) now correctly propagates NAs also when x is of type
+  integer and begins with an NA.
+
+* summaryRprof() could fail when the profile contained only two
+  records.  (PR#16395)
+
+* HTML vignettes opened using vignette() did not support links into
+  the rest of the HTML help system.  (Links worked properly when
+  the vignette was opened using browseVignettes() or from within
+  the help system.)
+
+* arima(*, xreg = .) (for d = 1) 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2015-04-21 10:52:15

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2015-03-11 
09:58:07.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2015-04-21 
10:52:17.0 +0200
@@ -1,0 +2,540 @@
+Thu Apr 16 14:52:43 UTC 2015 - detlef.ste...@gmx.de
+
+- Upstream release 3.2.0
+- Most important
+  CHANGES IN 3.2.0:
+  NEW FEATURES:
+
+* anyNA() gains a recursive argument.
+
+* When x is missing and names is not false (including the default
+  value), Sys.getenv(x, names) returns an object of class Dlist
+  and hence prints tidily.
+
+* (Windows.)  shell() no longer consults the environment variable
+  SHELL: too many systems have been encountered where it was set
+  incorrectly (usually to a path where software was compiled, not
+  where it was installed).  R_SHELL, the preferred way to select a
+  non-default shell, can be used instead.
+
+* Some unusual arguments to embedFonts() can now be specified as
+  character vectors, and the defaults have been changed
+  accordingly.
+
+* Functions in the Summary group duplicate less.  (PR#15798)
+
+* (Unix-alikes.) system(cmd, input = ) now uses
+  'shell-execution-environment' redirection, which will be more
+  natural if cmd is not a single command (but requires a
+  POSIX-compliant shell). (Wish of PR#15508)
+
+* read.fwf() and read.DIF() gain a fileEncoding argument, for
+  convenience.
+
+* Graphics devices can add attributes to their description in
+  .Device and .Devices.  Several of those included with R use a
+  filepath attribute.
+
+* pmatch() uses hashing in more cases and so is faster at the
+  expense of using more memory. (PR#15697)
+
+* pairs() gains new arguments to select sets of variables to be
+  plotted against each other.
+
+* file.info(, extra_cols = FALSE) allows a minimal set of columns
+  to be computed on Unix-alikes: on some systems without
+  properly-configured caching this can be significantly faster with
+  large file lists.
+
+* New function dir.exists() in package base to test efficiently
+  whether one or more paths exist and are directories.
+
+* dput() and friends gain new controls hexNumeric and digits17
+  which output double and complex quantities as, respectively,
+  binary fractions (exactly, see sprintf(%a)) and as decimals
+  with up to 17 significant digits.
+
+* save(), saveRDS() and serialize() now support ascii = NA which
+  writes ASCII files using sprintf(%a) for double/complex
+  quantities.  This is read-compatible with ascii = TRUE but avoids
+  binary-decimal-binary conversions with potential loss of
+  precision.  Unfortunately the Windows C runtime's lack of C99
+  compliance means that the format cannot be read correctly there
+  in R before 3.1.2.
+
+* The default for formatC(decimal.mark =) has been changed to be
+  getOption(OutDec); this makes it more consistent with format()
+  and suitable for use in print methods, e.g. those for classes
+  density, ecdf, stepfun and summary.lm.
+
+  getOption(OutDec) is now consulted by the print method for
+  class kmeans, by cut(), dendrogram(), plot.ts() and quantile()
+  when constructing labels and for the report from legend(trace =
+  TRUE).
+
+  (In part, wish of PR#15819.)
+
+* printNum() and hence format() and formatC() give a warning if
+  big.mark and decimal.mark are set to the same value (period and
+  comma are not uncommonly used for each, and this is a check that
+  conventions have not got mixed).
+
+* merge() can create a result which uses long vectors on 64-bit
+  platforms.
+
+* dget() gains a new argument keep.source which defaults to FALSE
+  for speed (dput() and dget() are most often used for data objects
+  where this can make dget() many times faster).
+
+* Packages may now use a file of common macro definitions in their
+  help files, and may import definitions from other packages.
+
+* A number of macros have been added in the new share/Rd directory
+  for use in package overview help pages, and promptPackage() now
+  makes use of them.
+
+* tools::parse_Rd() gains a new permissive argument which converts
+  unrecognized macros into text.  This is used by
+  utils:::format.bibentry to allow LaTeX markup to be ignored.
+
+* options(OutDec =) can now specify a multi-byte character, e.g.,
+  options(OutDec = \u00b7) in a UTF-8 locale.
+
+* 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2015-03-11 09:58:05

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2014-12-17 
19:14:48.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2015-03-11 
09:58:07.0 +0100
@@ -1,0 +2,190 @@
+Mon Mar  9 10:26:51 UTC 2015 - detlef.ste...@gmx.de
+
+- Upstream release 3.1.3
+- Most important
+  CHANGES IN R 3.1.3:
+
+  NEW FEATURES:
+
+* The internal method of download.file() can now handle files
+  larger than 2GB on 32-bit builds which support such files (tested
+  on 32-bit R running on 64-bit Windows).
+
+* kruskal.test() warns on more types of suspicious input.
+
+* The as.dendrogram() method for hclust objects gains a check
+  argument protecting against memory explosion for invalid inputs.
+
+* capabilities() has a new item long.double which indicates if the
+  build uses a long double type which is longer than double.
+
+* nlm() no longer modifies the callback argument in place (a new
+  vector is allocated for each invocation, which mimics the
+  implicit duplication that occurred in R  3.1.0); note that this
+  is a change from the previously documented behavior. (PR#15958)
+
+* icuSetCollate() now accepts locale = ASCII which uses the basic
+  C function strcmp and so collates strings byte-by-byte in
+  numerical order.
+
+* sessionInfo() tries to report the OS version in use (not just
+  that compiled under, and including details of Linux
+  distributions).
+
+* model.frame() (used by lm() and many other modelling functions)
+  now warns when it drops contrasts from factors.  (Wish of
+  PR#16119)
+
+* install.packages() and friends now accept the value type =
+  binary as a synonym for the native binary type on the platform
+  (if it has one).
+
+* Single source or binary files can be supplied for
+  install.packages(type = both) and the appropriate type and
+  repos = NULL will be inferred.
+
+* New function pcre_config() to report on some of the configuration
+  options of the version of PCRE in use.  In particular, this
+  reports if regular expressions using \p{xx} are supported.
+
+* (Windows.) download.file(cacheOK = FALSE) is now supported when
+  internet2.dll is used.
+
+* browseURL() has been updated to work with Firefox 36.0 which has
+  dropped support for the -remote interface.
+
+  INSTALLATION and INCLUDED SOFTWARE:
+
+* The included version of PCRE has been updated to 8.36.
+
+* configure accepts MAKEINFO=texi2any as another way to ensure
+  texinfo 5.x is used when both 5.x and 4.x are installed.
+
+  UTILITIES:
+
+* R CMD check now checks the packages used in \donttest sections of
+  the examples are specified in the DESCRIPTION file.  (These are
+  needed to run the examples interactively.)
+
+* R CMD check checks for the undeclared use of GNU extensions in
+  Makefiles, and for Makefiles with a missing final linefeed.
+
+  R CMD build will correct line endings in all Makefiles, not just
+  those in the src directory.
+
+* R CMD check notes uses of library() and require() in package
+  code: see the section 'Suggested packages' of 'Writing R
+  Extensions' for good practice.
+
+  DEPRECATED AND DEFUNCT:
+
+* The configure option --with-valgrind-instrumentation=3 is
+  deprecated and will be removed in R 3.2.0.
+
+  BUG FIXES:
+
+* (Windows.) Rscript.exe was missing a manifest specifying the
+  modern style for common controls (e.g., the download progress
+  bar).
+
+* If a package had extra documentation files but no vignette, the
+  HTML help system produced an empty index page.
+
+* The parser now gives an error if a null character is included in
+  a string using Unicode escapes. (PR#16046)
+
+* qr.Q() failed on complex arguments due to pre-3.0(!) typo.
+  (PR#16054)
+
+* abs() failed with named arguments when the argument was complex.
+  (PR#16047)
+
+* noquote objects may now be used as columns in dataframes.
+  (PR#15997)
+
+* Some values with extremely long names were printed incorrectly.
+  (PR#15999)
+
+* Extremely large exponents on zero expressed in scientific
+  notation (e.g. 0.0e5) could give NaN.  (PR#15976)
+
+* download.file() reported downloaded sizes as 0KB if less than
+  1MB, only for R 3.1.2 and only on big-endian platforms.
+
+* prompt() did not escape percent signs in the automatically
+  generated usage section of help files.
+
+* drop.terms() 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2014-12-17 19:15:41

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2014-11-02 
16:46:54.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2014-12-17 
19:14:48.0 +0100
@@ -1,0 +2,6 @@
+Fri Dec 12 13:16:25 UTC 2014 - sbahl...@suse.com
+
+- Remove tex(inconsolata.sty) BuildRequires for SLE_12 builds (like
+  older SLE releases).
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.P8QS4x/_old  2014-12-17 19:14:50.0 +0100
+++ /var/tmp/diff_new_pack.P8QS4x/_new  2014-12-17 19:14:50.0 +0100
@@ -64,9 +64,12 @@
 BuildRequires:  texlive-tex
 BuildRequires:  texlive-times
 BuildRequires:  xdg-utils
+# No tex(inconsolata.sty) provided in SLE-12
+%if %suse_version != 1315
 BuildRequires:  tex(inconsolata.sty)
 %endif
 %endif
+%endif
 BuildRequires:  pango-devel
 BuildRequires:  tcl-devel
 BuildRequires:  texinfo

-- 
To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, e-mail: opensuse-commit+h...@opensuse.org

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2014-11-02 16:46:28

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2014-07-11 
06:46:58.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2014-11-02 
16:46:54.0 +0100
@@ -1,0 +2,208 @@
+Fri Oct 31 11:59:25 UTC 2014 - detlef.ste...@gmx.de
+
+- Upstream release 3.1.2
+- Most important
+  CHANGES IN R 3.1.2:
+
+  NEW FEATURES:
+
+* embedFonts() now defaults to format = ps2write for .ps and .eps
+  files.  This is available in Ghostscript 9.x (since 2010) whereas
+  the previous default, format = pswrite, was removed in
+  Ghostscript 9.10.
+
+* For consistency with [dpqr]norm(), [dp]lnorm(sdlog = 0) model a
+  point mass at exp(mulog) rather than return NaN (for an error).
+
+* capabilities() now reports if ICU is compiled in for use for
+  collation (it is only actually used if a suitable locale is set
+  for collation, and never for a C locale).
+
+* (OS X only.) Package tcltk checks when loaded if it is linked
+  against the CRAN X11-based Tcl/Tk and if so that the Tcl/Tk
+  component and the X11 libraries are installed.  This allows more
+  informative error messages to be given advising the installation
+  of the missing component or of XQuartz.
+
+  The X11() device and X11-based versions of the data editor and
+  viewer (invoked by edit() and View() for data frames and matrices
+  from command-line R) check that the X11 libraries are installed
+  and if not advises installing XQuartz.
+
+* icuSetCollate() allows locale = default, and locale = none to
+  use OS services rather than ICU for collation.
+
+  Environment variable R_ICU_LOCALE can be used to set the default
+  ICU locale, in case the one derived from the OS locale is
+  inappropriate (this is currently necessary on Windows).
+
+* New function icuGetCollate() to report on the ICU collation
+  locale in use (if any).
+
+* utils::URLencode() was updated to use unreserved and reserved
+  characters from RFC 3986, URL:
+  http://tools.ietf.org/html/rfc3986, instead of RFC 1738.
+
+* unique(warnings()) and c(warnings()) are now supported.
+
+* The Bioconductor 'version' used by setRepositories() now defaults
+  to 3.0. (It can be set at runtime _via_ environment variable
+  R_BIOC_VERSION.)
+
+  INSTALLATION and INCLUDED SOFTWARE:
+
+* The configure script reports on the more important
+  capabilities/options which will not be compiled in.
+
+  More types of external BLAS are recognized by name in that
+  report.
+
+* When building R as a shared library, the -L${R_HOME}/lib${R_ARCH}
+  flag is placed earlier in the link commands used during
+  installation and when packages are installed: this helps ensure
+  that the current build has priority if an R shared library has
+  already been installed by e.g. install-libR in a library
+  mentioned in LDFLAGS (and not in 'your system's library
+  directory' as documented). (Wish of PR#15790.)
+
+* LaTeX package upquote is no longer required for R's use of
+  inconsolata.
+
+* (Windows only) If both 32 and 64 bit versions of R are installed,
+  the bin/R.exe and bin/Rscript.exe executables now run 64 bit R.
+  (To run 32 bit R, overwrite these files with copies of
+  bin/i386/Rfe.exe.)
+
+  UTILITIES:
+
+* Running R CMD check with _R_CHECK_DEPENDS_ONLY_ true now makes
+  the VignetteBuilder packages available even if they are listed in
+  Suggests, since they are needed to recognise and process
+  non-Sweave vignettes.
+
+* R CMD check now reports empty importFrom declarations in a
+  NAMESPACE file, as these are common errors (writing
+  importFrom(Pkg) where import(Pkg) was intended).
+
+* R CMD check now by default checks code usage directly on the
+  package namespace without loading and attaching the package and
+  its suggests and enhances.  For good practice with packages in
+  the Suggests field, see SS1.1.3.1 of 'Writing R Extensions'.  For
+  use of lazy-data objects in the package's own code, see ?data.
+
+  BUG FIXES:
+
+* dmultinom() did not handle non-finite probabilities correctly.
+
+* prettyNum(x, zero.print=*) now also works when x contains NAs.
+
+* A longstanding bug exhibited by nlminb() on Windows was traced to
+  a compiler bug in gcc 4.6.3; a workaround has been put in place.
+  (PR#15244 and PR#15914).
+
+* Rendering of \command in HTML versions of help pages has been
+  improved: 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2014-07-11 06:46:11

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2014-07-02 
15:04:42.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2014-07-11 
06:46:58.0 +0200
@@ -1,0 +2,246 @@
+Thu Jul 10 12:35:42 UTC 2014 - detlef.ste...@gmx.de
+
+- Added Provides: R-parallel
+- Upstream release 3.1.1
+- Most impotant
+   CHANGES IN R 3.1.1:
+
+CHANGES IN R 3.1.1:
+
+  NEW FEATURES:
+
+* When attach() reports conflicts, it does so compatibly with
+  library() by using message().
+
+* R CMD Sweave no longer cleans any files by default, compatibly
+  with versions of R prior to 3.1.0.  There are new options
+  --clean, --clean=default and --clean=keepOuts.
+
+* tools::buildVignette() and tools::buildVignettes() with clean =
+  FALSE no longer remove any created files.  buildvignette() gains
+  a keep argument for more cleaning customization.
+
+* The Bioconductor 'version' used by setRepositories() can now be
+  set by environment variable R_BIOC_VERSION at runtime, not just
+  when R is installed.  (It has been stated that Bioconductor will
+  switch from 'version' 2.14 to 'version' 3.0 during the lifetime
+  of the R 3.1 series.)
+
+* Error messages from bugs in embedded Sexpr code in Sweave
+  documents now report the source location.
+
+* type.convert(), read.table() and similar read.*() functions get a
+  new numerals argument, specifying how numeric input is converted
+  when its conversion to double precision loses accuracy.  The
+  default value, allow.loss allows accuracy loss, as in R
+  versions before 3.1.0.
+
+* For some compilers, integer addition could overflow without a
+  warning.  R's internal code for both integer addition and
+  subtraction is more robust now.  (PR#15774)
+
+* The function determining the default number of knots for
+  smooth.spline() is now exported, as .nknots.smspl().
+
+* dbeta(, a,b), pbeta(), qbeta() and rbeta() are now defined also
+  for a = 0, b = 0, or infinite a and b (where they typically
+  returned NaN before).
+
+* Many package authors report that the RStudio graphics device does
+  not work correctly with their package's use of dev.new().  The
+  new option dev.new(noRStudioGD = TRUE) replaces the RStudio
+  override by the default device as selected by R itself, still
+  respecting environment variables R_INTERACTIVE_DEVICE and
+  R_DEFAULT_DEVICE.
+
+* readRDS() now returns visibly.
+
+* Modifying internal logical scalar constants now results in an
+  error instead of a warning.
+
+* install.packages(repos = NULL) now accepts http:// or ftp:// URLs
+  of package archives as well as file paths, and will download as
+  required.  In most cases repos = NULL can be deduced from the
+  extension of the URL.
+
+* The warning when using partial matching with the $ operator on
+  data frames is now only given when
+  options(warnPartialMatchDollar) is TRUE.
+
+* Package help requests like package?foo now try the package foo
+  whether loaded or not.
+
+* General help requests now default to trying all loaded packages,
+  not just those on the search path.
+
+* Added a new function promptImport(), to generate a help page for
+  a function that was imported from another package (and presumably
+  re-exported, or help would not be needed).
+
+  INSTALLATION and INCLUDED SOFTWARE:
+
+* configure option --with-internal-tzcode can now be used with
+  variable rsharedir.
+
+* The included version of PCRE has been updated to 8.35.
+
+* There is a new target make uninstall-libR to remove an installed
+  shared/static libR.
+
+  make install-libR now works if a sub-architecture is used,
+  although the user will need to specify libdir differently for
+  different sub-architectures.
+
+* There is more extensive advice on which LaTeX packages are
+  required to install R or to make package manuals (as done by R
+  CMD check) in the 'Writing R Extensions' manual.
+
+* Compilers/linkers were handling the visibility controls in
+  src/extra/xz inconsistently (and apparently in some cases
+  incorrectly), so it has been simplified.  (PR#15327)
+
+* (Windows) There is updated support for the use of ICU for
+  collation: see the 'R Installation and Administration Manual'.
+
+  BUG FIXES:
+
+* dbinom(x, n), pbinom(), dpois(), etc, are slightly less
+  restrictive in checking if n is 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2014-07-02 15:04:40

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2014-05-13 
20:48:09.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2014-07-02 
15:04:42.0 +0200
@@ -1,0 +2,5 @@
+Fri Jun 20 18:26:23 UTC 2014 - da...@darins.net
+
+- added parallel provides
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.xIti4s/_old  2014-07-02 15:04:43.0 +0200
+++ /var/tmp/diff_new_pack.xIti4s/_new  2014-07-02 15:04:43.0 +0200
@@ -104,6 +104,7 @@
 Provides:   R-mgcv = 1.7.29
 Provides:   R-nlme = 3.1.117
 Provides:   R-nnet = 7.3.8
+Provides:   R-parallel = 3.0.2
 Provides:   R-rpart = 4.1.8
 Provides:   R-spatial = 7.3.8
 Provides:   R-splines = %{version}

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To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
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commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2014-05-13 20:47:49

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2014-04-11 
13:42:19.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2014-05-13 
20:48:09.0 +0200
@@ -1,0 +2,19 @@
+Fri May  9 18:18:25 UTC 2014 - detlef.ste...@gmx.de
+
+- Removed / commented out symlink to %{_bindir}/r
+  new package 'littler' should be used instead for packages
+  that need /usr/bin/r 
+
+---
+Thu May  1 15:29:30 UTC 2014 - da...@darins.net
+
+-  Add make dependency for Rcmd
+
+---
+Tue Apr 29 15:31:15 UTC 2014 - da...@darins.net
+
+- Created symlink to %{_bindir}/r
+  Many CRAN packages ship with scripts which call %{_bindir}/r,
+  which creates a dependency on it, this fixes that.
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.jIbhN4/_old  2014-05-13 20:48:10.0 +0200
+++ /var/tmp/diff_new_pack.jIbhN4/_new  2014-05-13 20:48:10.0 +0200
@@ -77,6 +77,7 @@
 Requires:   fontconfig
 Requires:   freetype2
 Requires:   glibc-locale
+Requires:   make
 Requires:   readline
 Requires:   xdg-utils
 Requires:   xorg-x11-fonts-100dpi
@@ -162,6 +163,13 @@
 
 chmod -x %{buildroot}%{_libdir}/R/library/mgcv/CITATION
 
+# littler should be used instead
+# link R - r
+#%{__install} -m 755 -d %{buildroot}%{_bindir}
+#pushd %{buildroot}%{_bindir}
+#ln -s R r
+#popd
+
 %if %suse_version  1020
 %fdupes -s $RPM_BUILD_ROOT  
 %endif
@@ -976,7 +984,7 @@
 %{_infodir}/*.gz
 %doc %{_libdir}/R/doc/
 %dir %{_libdir}/R
-/usr/bin/*
+%{_bindir}/*
 %{_libdir}/R/bin/
 %{_libdir}/R/etc/
 %{_libdir}/R/lib/

-- 
To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, e-mail: opensuse-commit+h...@opensuse.org

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2014-04-11 13:42:16

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2014-03-09 
20:21:42.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2014-04-11 
13:42:19.0 +0200
@@ -1,0 +2,306 @@
+Thu Apr 10 10:58:30 UTC 2014 - detlef.ste...@gmx.de
+
+- Upstream release 3.1.0
+- Most impotant
+   CHANGES IN R 3.1.0:
+
+  NEW FEATURES:
+
+* type.convert() (and hence by default read.table()) returns a
+  character vector or factor when representing a numeric input as a
+  double would lose accuracy.  Similarly for complex inputs.
+
+  If a file contains numeric data with unrepresentable numbers of
+  decimal places that are intended to be read as numeric, specify
+  colClasses in read.table() to be numeric.
+
+* tools::Rdiff(useDiff = FALSE) is closer to the POSIX definition
+  of diff -b (as distinct from the description in the man pages of
+  most systems).
+
+* New function anyNA(), a version of any(is.na(.)) which is fast
+  for atomic vectors, based on a proposal by Tim Hesterberg. (Wish
+  of PR#15239.)
+
+* arrayInd(*, useNames = TRUE) and, analogously, which(*, arr.ind =
+  TRUE) now make use of names(.dimnames) when available.
+
+* is.unsorted() now also works for raw vectors.
+
+* The table method for as.data.frame() (also useful as
+  as.data.frame.table()) now passes sep and base arguments to
+  provideDimnames().
+
+* uniroot() gets new optional arguments, notably extendInt,
+  allowing to auto-extend the search interval when needed.  The
+  return value has an extra component, init.it.
+
+* switch(f, ...) now warns when f is a factor, as this typically
+  happens accidentally where the useR meant to pass a character
+  string, but f is treated as integer (as always documented).
+
+* The parser has been modified to use less memory.
+
+* The way the unary operators (+ - !) handle attributes is now more
+  consistent.  If there is no coercion, all attributes (including
+  class) are copied from the input to the result: otherwise only
+  names, dims and dimnames are.
+
+* colorRamp() and colorRampPalette() now allow non-opaque colours
+  and a ramp in opacity via the new argument alpha = TRUE.
+  (Suggested by Alberto Krone-Martins, but optionally as there are
+  existing uses which expect only RGB values.)
+
+* grid.show.layout() and grid.show.viewport() get an optional vp.ex
+  argument.
+
+* There is a new function find_gs_cmd() in the tools package to
+  locate a GhostScript executable.  (This is an enhanced version of
+  a previously internal function there.)
+
+* object.size() gains a format() method.
+
+* There is a new family, ArialMT, for the pdf() and postscript()
+  devices.  This will only be rendered correctly on viewers which
+  have access to Monotype TrueType fonts (which are sometimes
+  requested by journals).
+
+* The text and PDF news files, including NEWS and NEWS.2, have been
+  moved to the doc directory.
+
+* combn(x, simplify = TRUE) now gives a factor result for factor
+  input x (previously user error).  (Related to PR#15442.)
+
+* Added utils::fileSnapshot() and utils::changedFiles() functions
+  to allow snapshots and comparison of directories of files.
+
+* make.names(names, unique=TRUE) now tries to preserve existing
+  names. (Suggestion of PR#15452.)
+
+* New functions cospi(x), sinpi(x), and tanpi(x), for more accurate
+  computation of cos(pi*x), etc, both in R and the C API.  Using
+  these gains accuracy in some cases, e.g., inside lgamma() or
+  besselI().  (Suggested by Morten Welinder in PR#15529.)
+   * print.table(x, zero.print = .) now also has an effect when x is
+  not integer-valued.
+
+* There is more support to explore the system's idea of time-zone
+  names.  Sys.timezone() tries to give the current system setting
+  by name (and succeeds at least on Linux, OS X, Solaris and
+  Windows), and OlsonNames() lists the names in the system's Olson
+  database. Sys.timezone(location = FALSE) gives the previous
+  behaviour.
+
+* Platforms with a 64-bit time_t type are allowed to handle
+  conversions between the POSIXct and POSIXlt classes for
+  date-times outside the 32-bit range (before 1902 or after 2037):
+  the existing workarounds are used on other platforms.  (Note that
+  time-zone information for post-2037 is speculative at best, and
+  the OS services are 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2014-03-09 20:21:40

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2013-10-04 
08:18:04.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2014-03-09 
20:21:42.0 +0100
@@ -1,0 +2,73 @@
+Thu Mar  6 10:08:59 UTC 2014 - detlef.ste...@gmx.de
+
+- Upstream release 3.0.3
+- Most important
+  CHANGES IN R 3.0.3:
+
+  NEW FEATURES:
+
+* On Windows there is support for making .texi manuals using
+  texinfo 5.0 or later: the setting is in file
+  src/gnuwin32/MkRules.dist.
+
+  A packaging of the Perl script and modules for texinfo 5.2 has
+  been made available at URL:
+  http://www.stats.ox.ac.uk/pub/Rtools/.
+
+* write.table() now handles matrices of 2^31 or more elements, for
+  those with large amounts of patience and disc space.
+
+* There is a new function, La_version(), to report the version of
+  LAPACK in use.
+
+* The HTML version of 'An Introduction to R' now has links to PNG
+  versions of the figures.
+
+* There is some support to produce manuals in ebook formats. (See
+  doc/manual/Makefile.  Suggested by Mauro Cavalcanti.)
+
+* On a Unix-alike Sys.timezone() returns NA if the environment
+  variable TZ is unset, to distinguish it from an empty string
+  which on some OSes means the UTC time zone.
+
+* The backtick may now be escaped in strings, to allow names
+  containing them to be constructed, e.g. `\``.  (PR#15621)
+
+* read.table(), readLines() and scan() now warn when an embedded
+  nul is found in the input.  (Related to PR#15625 which was
+  puzzled by the behaviour in this unsupported case.)
+
+* (Windows only.)  file.symlink() works around the undocumented
+  restriction of the Windows system call to backslashes.  (Wish of
+  PR#15631.)
+
+* KalmanForecast(fast = FALSE) is now the default, and the help
+  contains an example of how fast = TRUE can be used in this
+  version.  (The usage will change in 3.1.0.)
+
+* strptime() now checks the locale only when locale-specific
+  formats are used and caches the locale in use: this can halve the
+  time taken on OSes with slow system functions (e.g. OS X).
+
+* strptime() and the format() methods for classes POSIXct,
+  POSIXlt and Date recognize strings with marked encodings:
+  this allows, for example, UTF-8 French month names to be read on
+  (French) Windows.
+
+* iconv(to = utf8) is now accepted on all platforms (some
+  implementations did already, but GNU libiconv did not: however
+  converted strings were not marked as being in UTF-8).  The
+  official name, UTF-8 is still preferred.
+
+* available.packages() is better protected against corrupt metadata
+  files.  (A recurring problem with Debian package shogun-r:
+  PR#14713.)
+
+* Finalizers are marked to be run at garbage collection, but run
+  only at a somewhat safer later time (when interrupts are
+  checked).  This circumvents some problems with finalizers running
+  arbitrary code during garbage collection (the known instances
+  being running options() and (C-level) path.expand()
+  re-entrantly).
+
+---

Old:

  R-3.0.2.tar.bz2

New:

  R-3.0.3.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.eTwCLb/_old  2014-03-09 20:21:43.0 +0100
+++ /var/tmp/diff_new_pack.eTwCLb/_new  2014-03-09 20:21:43.0 +0100
@@ -1,7 +1,7 @@
 #
 # spec file for package R-base
 #
-# Copyright (c) 2013 SUSE LINUX Products GmbH, Nuernberg, Germany.
+# Copyright (c) 2014 SUSE LINUX Products GmbH, Nuernberg, Germany.
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -18,7 +18,7 @@
 
 Name:   R-base
 %define release 1 
-Version:3.0.2
+Version:3.0.3
 Release:%release
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
@@ -84,30 +84,30 @@
 Provides:   R = %{version}
 Provides:   R-KernSmooth = 2.23.10
 Provides:   R-MASS = 7.3.29
-Provides:   R-Matrix = 1.0.14
+Provides:   R-Matrix = 1.1.2
 Provides:   R-base = %{version}
-Obsoletes:  R-Matrix  1.0.14
+Obsoletes:  R-Matrix  1.1.2
 Provides:   R-boot = 1.3.9
 Provides:   R-class = 7.3.9
 Provides:   

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2013-10-04 08:18:01

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2013-09-13 
14:43:20.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2013-10-04 
08:18:04.0 +0200
@@ -1,0 +2,120 @@
+Fri Sep 27 13:20:39 UTC 2013 - detlef.ste...@gmx.de
+
+- Removed outdated source file  
+
+---
+Wed Sep 25 14:01:26 UTC 2013 - detlef.ste...@gmx.de
+
+- Upstream release 3.0.2
+- Most important
+  CHANGES IN R 3.0.2:
+
+  NEW FEATURES:
+
+* The NEWS files have been re-organized.
+
+  This file contains news for R = 3.0.0: news for the 0.x.y, 1.x.y
+  and 2.x.y releases is in files NEWS.0, NEWS.1 and NEWS.2.  The
+  latter files are now installed when R is installed.  An HTML
+  version of news from 2.10.0 to 2.15.3 is available as
+  doc/html/NEWS.2.html.
+
+* sum() for integer arguments now uses an integer accumulator of at
+  least 64 bits and so will be more accurate in the very rare case
+  that a cumulative sum exceeds 2^53 (necessarily summing more than
+  4 million elements).
+
+* The example() and tools::Rd2ex() functions now have parameters to
+  allow them to ignore \dontrun markup in examples.  (Suggested by
+  Peter Solymos.)
+
+* str(x) is considerably faster for very large lists, or factors
+  with 100,000 levels, the latter as in PR#15337.
+
+* col2rgb() now converts factors to character strings not integer
+  codes (suggested by Bryan Hanson).
+
+* tail(warnings()) now works, via the new `[` method.
+
+* There is now support for the LaTeX style file zi4.sty which has
+  in some distributions replaced inconsolata.sty.
+
+* unlist(x) now typically returns all non-list xs unchanged, not
+  just the vector ones.  Consequently, format(lst) now also works
+  when the list lst has non-vector elements.
+
+* The tools::getVignetteInfo() function has been added to give
+  information about installed vignettes.
+
+* New assertCondition(), etc. utilities in tools, useful for
+  testing.
+
+* Profiling now records non-inlined calls from byte-compiled code
+  to BUILTIN functions.
+
+* Various functions in stats and elsewhere that use non-standard
+  evaluation are now more careful to follow the namespace scoping
+ rules.  E.g. stats::lm() can now find stats::model.frame() even
+  if stats is not on the search path or if some package defines a
+  function of that name.
+
+* If an invalid/corrupt .Random.seed object is encountered in the
+  workspace it is ignored with a warning rather than giving an
+  error.  (This allows R itself to rely on a working RNG, e.g. to
+  choose a random port.)
+
+* seq() and seq.int() give more explicit error messages if called
+  with invalid (e.g. NaN) inputs.
+
+* When parse() finds a syntax error, it now makes partial parse
+  information available up to the location of the error.  (Request
+  of Reijo Sund.)
+
+* Methods invoked by NextMethod() had a different dynamic parent to
+  the generic. This was causing trouble where S3 methods invoked
+  via lazy evaluation could lose track of their generic.
+  (PR#15267)
+
+* Code for the negative binomial distribution now treats the case
+  size == 0 as a one-point distribution at zero.
+
+* abbreviate() handles without warning non-ASCII input strings
+  which require no abbreviation.
+
+* read.dcf() no longer has a limit of 8191 bytes per line. (Wish of
+  PR#15250.)
+
+* formatC(x) no longer copies the class of x to the result, to
+  avoid misuse creating invalid objects as in PR#15303.  A warning
+  is given if a class is discarded.
+
+* Dataset npk has been copied from MASS to allow more tests to be
+  run without recommended packages being installed.
+
+* The initialization of the regression coefficients for
+  non-degenerate differenced models in arima() has been changed and
+  in some examples avoids a local maximum.  (PR#15396)
+
+* termplot() now has an argument transform.x to control the display
+  of individual terms in the plot.  (PR#15329)
+
+* format() now supports digits = 0, to display nsmall decimal
+  places.
+
+* There is a new read-only par() parameter called page, which
+  returns a logical value indicating whether the next plot.new()
+  call will start a new page.
+
+* Processing Sweave and Rd documents to PDF now renders backticks
+  and single quotes 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2013-09-13 14:43:19

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2013-05-17 
08:34:04.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2013-09-13 
14:43:20.0 +0200
@@ -1,0 +2,5 @@
+Mon Aug 26 14:19:31 UTC 2013 - sch...@suse.de
+
+- tre.patch: Fix tre library for aarch64 where wchar_t is unsigned int
+
+---

New:

  tre.patch



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.z6Oc8x/_old  2013-09-13 14:43:21.0 +0200
+++ /var/tmp/diff_new_pack.z6Oc8x/_new  2013-09-13 14:43:21.0 +0200
@@ -22,6 +22,8 @@
 Release:%release
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
+# PATCH-FIX-UPSTREAM Fix tre when wchar_t is unsigned int
+Patch:  tre.patch
 
 Url:http://www.r-project.org/
 
@@ -129,6 +131,7 @@
 %prep 
 
 %setup -n R-%{version}
+%patch -p1
 
 %build 
 export R_BROWSER=xdg-open

++ tre.patch ++
Index: R-3.0.1/src/extra/tre/tre-internal.h
===
--- R-3.0.1.orig/src/extra/tre/tre-internal.h
+++ R-3.0.1/src/extra/tre/tre-internal.h
@@ -17,6 +17,7 @@
 #include wctype.h
 #endif /* !HAVE_WCTYPE_H */
 
+#include limits.h
 #include ctype.h
 #include tre.h
 
@@ -48,7 +49,11 @@
 
 /* Wide characters. */
 typedef wint_t tre_cint_t;
+#if WCHAR_MAX = INT_MAX
 #define TRE_CHAR_MAX WCHAR_MAX
+#else /* WCHAR_MAX  INT_MAX */
+#define TRE_CHAR_MAX INT_MAX
+#endif
 
 #ifdef TRE_MULTIBYTE
 #define TRE_MB_CUR_MAX MB_CUR_MAX
-- 
To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, e-mail: opensuse-commit+h...@opensuse.org

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2013-05-17 08:34:02

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2013-04-17 
23:17:47.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2013-05-17 
08:34:04.0 +0200
@@ -1,0 +2,55 @@
+Thu May 16 13:17:09 UTC 2013 - detlef.ste...@gmx.de
+
+- Improved spec file: R-base-devel requires R-base 
+
+---
+Thu May 16 11:21:09 UTC 2013 - detlef.ste...@gmx.de
+
+- Upstream release 3.0.1
+- Most important 
+  CHANGES IN R 3.0.1:
+
+  NEW FEATURES:
+
+o chooseCRANmirror() and chooseBioCmirror() gain an ind argument
+  (like setRepositories()).
+
+o mcparallel has a new argument mc.interactive which can modify the
+  interactive flag in the child process. The new default is FALSE
+  which makes child processes non-interactive by default (this
+  prevents lock-ups due to children waiting for interactive input).
+
+o scan() now warns when end-of-file occurs within a quoted string.
+
+o count.fields() is now consistent with scan() in its handling of
+  newlines in quoted strings.  Instead of triggering an error, this
+  results in the current line receiving NA as the field count, with
+  the next line getting the total count of the two lines.
+
+o The default method of image() will plot axes of the class of xlim
+  and ylim (and hence of x and y if there is a suitable range()
+  method).  Based on a suggestion of Michael Sumner.
+
+o load() now has a verbose argument for debugging support, to print
+  the names of objects just before loading them.
+
+o When loading a serialized object encounters a reference to a
+  namespace which cannot be loaded, this is replaced by a reference
+  to the global environment, with a warning.
+
+o pairs() gains a line.main option for title placement.
+
+o The remaining instances in which serialization to a raw vector
+  was limited to 2GB have been unlimited on a 64-bit platform, and
+  in most cases serialization to a vector of more than 1GB will be
+  substantially faster. 
+
+- Improved spec file. Lots of commented out lines finally removed
+ 
+---
+Wed Apr 10 07:26:36 UTC 2013 - detlef.ste...@gmx.de
+
+- R-base.spec improved: now uses R-%{version}.tar.bz2 explicitly.
+  Mistake when version bumping to 3.0.0 corrected 
+
+---

Old:

  R-3.0.0.tar.bz2

New:

  R-3.0.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.0m26mC/_old  2013-05-17 08:34:06.0 +0200
+++ /var/tmp/diff_new_pack.0m26mC/_new  2013-05-17 08:34:06.0 +0200
@@ -18,7 +18,7 @@
 
 Name:   R-base
 %define release 1 
-Version:3.0.0
+Version:3.0.1
 Release:%release
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
@@ -119,7 +119,7 @@
 Group:  Development/Libraries/Other
 Provides:   R-Matrix-devel = 1.0.12
 Provides:   R-devel = %{version}
-Requires:   R-devel
+Requires:   R-base
 Obsoletes:  R-Matrix-devel  1.0.12
 
 %description -n R-base-devel
@@ -146,9 +146,6 @@
 
 %install 
 make DESTDIR=%{buildroot} install
-
-#%find_lang R
-
 make DESTDIR=%{buildroot} install-pdf
 
 # Installation of Info-files
@@ -209,20 +206,6 @@
 %{_libdir}/R/library/base/html/
 %{_libdir}/R/library/base/INDEX
 %{_libdir}/R/library/base/Meta/
-#%dir %{_libdir}/R/library/base/po/
-#%lang(da) %{_libdir}/R/library/base/po/da/
-#%lang(de) %{_libdir}/R/library/base/po/de/
-#%lang(en) %{_libdir}/R/library/base/po/en*/
-#%lang(fr) %{_libdir}/R/library/base/po/fr/
-#%lang(it) %{_libdir}/R/library/base/po/it/
-#%lang(ja) %{_libdir}/R/library/base/po/ja/
-#%lang(ko) %{_libdir}/R/library/base/po/ko/
-#%lang(nn) %{_libdir}/R/library/base/po/nn/
-#%lang(pl) %{_libdir}/R/library/base/po/pl/
-#%lang(pt) %{_libdir}/R/library/base/po/pt*/
-#%lang(ru) %{_libdir}/R/library/base/po/ru/
-#%lang(tr) %{_libdir}/R/library/base/po/tr/
-#%lang(zh) %{_libdir}/R/library/base/po/zh*/
 %{_libdir}/R/library/base/R/
 # boot
 %dir %{_libdir}/R/library/boot/
@@ -295,17 +278,6 @@
 %{_libdir}/R/library/compiler/Meta/
 %{_libdir}/R/library/compiler/NAMESPACE
 %{_libdir}/R/library/compiler/R/
-#%dir %{_libdir}/R/library/compiler/po
-#%lang(da) %{_libdir}/R/library/compiler/po/da/
-#%lang(de) 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2013-04-17 23:17:39

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2013-03-26 
15:59:06.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2013-04-17 
23:17:47.0 +0200
@@ -1,0 +2,37 @@
+Wed Apr  3 18:39:35 UTC 2013 - detlef.ste...@gmx.de
+
+- Upstream release 3.0.0
+- News for package: some new translation files
+- News upstream: /usr/lib/R/doc/NEWS.html
+- Most important
+  CHANGES IN R 3.0.0:
+
+  SIGNIFICANT USER-VISIBLE CHANGES:
+
+o Packages need to be (re-)installed under this version (3.0.0) of
+  R.
+
+o There is a subtle change in behaviour for numeric index values
+  2^31 and larger.  These never used to be legitimate and so were
+  treated as NA, sometimes with a warning.  They are now legal for
+  long vectors so there is no longer a warning, and x[2^31] - y
+  will now extend the vector on a 64-bit platform and give an error
+  on a 32-bit one.
+
+o It is now possible for 64-bit builds to allocate amounts of
+  memory limited only by the OS.  It may be wise to use OS
+  facilities (e.g. ulimit in a bash shell, limit in csh), to set
+  limits on overall memory consumption of an R process,
+  particularly in a multi-user environment.  A number of packages
+  need a limit of at least 4GB of virtual memory to load.
+
+  64-bit Windows builds of R are by default limited in memory usage
+  to the amount of RAM installed: this limit can be changed by
+  command-line option --max-mem-size or setting environment
+  variable R_MAX_MEM_SIZE.
+
+o Negative numbers for colours are consistently an error:
+  previously they were sometimes taken as transparent, sometimes
+  mapped into the current palette and sometimes an error.
+
+---

Old:

  R-2.15.3.tar.bz2

New:

  R-3.0.0.tar.bz2



Other differences:
--
++ R-base.spec ++
 1074 lines (skipped)
 between /work/SRC/openSUSE:Factory/R-base/R-base.spec
 and /work/SRC/openSUSE:Factory/.R-base.new/R-base.spec

++ R-2.15.3.tar.bz2 - R-3.0.0.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-2.15.3.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-3.0.0.tar.bz2 differ: char 11, line 1

-- 
To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, e-mail: opensuse-commit+h...@opensuse.org

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2013-03-26 15:59:05

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2013-03-11 
09:56:44.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2013-03-26 
15:59:06.0 +0100
@@ -1,0 +2,5 @@
+Mon Mar 18 14:38:57 UTC 2013 - sch...@suse.de
+
+- Override LIBnn from %{_lib}
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.upEg9C/_old  2013-03-26 15:59:08.0 +0100
+++ /var/tmp/diff_new_pack.upEg9C/_new  2013-03-26 15:59:08.0 +0100
@@ -130,7 +130,7 @@
 %build 
 export R_BROWSER=xdg-open
 export R_PDFVIEWER=xdg-open
-%configure --enable-R-shlib
+%configure --enable-R-shlib LIBnn=%{_lib}
 
 make %{?_smp_mflags}
 make pdf

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commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2013-03-11 09:56:42

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2012-11-02 
17:31:14.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2013-03-11 
09:56:44.0 +0100
@@ -1,0 +2,40 @@
+Fri Mar  1 12:15:30 UTC 2013 - detlef.ste...@gmx.de
+
+- There were a few new files in foreign and rpart.
+  Fixed now. Builds fine. 
+
+---
+Fri Mar  1 10:25:32 UTC 2013 - detlef.ste...@gmx.de
+
+- Upstream release 2.15.3
+- see, as usual, /usr/lib/R/doc/NEWS.html 
+- This is mostly a bugfix release and the final release for the
+  R-2.x.y series.
+- Most important additions:
+  NEW FEATURES:
+o lgamma(x) for very small x (in the denormalized range) is no
+  longer Inf with a warning.
+o image() now sorts an unsorted breaks vector, with a warning.
+o The internal methods for tar() and untar() do a slightly more
+  general job for 'ustar'-style handling of paths of more than 100
+  bytes.
+o Packages compiler and parallel have been added to the reference
+  index (refman.pdf).
+o untar(tar = internal) has some support for pax headers as
+  produced by e.g. gnutar --posix (which seems prevalent on
+  OpenSUSE 12.2) or bsdtar --format pax, including long path and
+  link names.
+o sQuote() and dQuote() now handle 0-length inputs.  (Suggestion of
+  Ben Bolker.)
+o summaryRprof() returns zero-row data frames rather than throw an
+  error if no events are recorded, for consistency.
+o The included version of PCRE has been updated to 8.32.
+o The tcltk namespace can now be re-loaded after unloading.
+  The Tcl/Tk event loop is inhibited in a forked child from package
+  parallel (as in e.g. mclapply()).
+o parallel::makeCluster() recognizes the value random for the
+  environment variable R_PARALLEL_PORT: this chooses a random value
+  for the port and reduces the chance of conflicts when multiple
+  users start a cluster at the same time.
+
+---

Old:

  R-2.15.2.tar.bz2

New:

  R-2.15.3.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.Vt5gN3/_old  2013-03-11 09:56:49.0 +0100
+++ /var/tmp/diff_new_pack.Vt5gN3/_new  2013-03-11 09:56:49.0 +0100
@@ -1,7 +1,7 @@
 #
 # spec file for package R-base
 #
-# Copyright (c) 2012 SUSE LINUX Products GmbH, Nuernberg, Germany.
+# Copyright (c) 2013 SUSE LINUX Products GmbH, Nuernberg, Germany.
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -18,7 +18,7 @@
 
 Name:   R-base
 %define release 1 
-Version:2.15.2
+Version:2.15.3
 Release:%release
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
@@ -79,30 +79,30 @@
 
 Provides:   R = %{version}
 Provides:   R-KernSmooth = 2.23.8
-Provides:   R-MASS = 7.3.22
-Provides:   R-Matrix = 1.0.9
-Obsoletes:  R-Matrix  1.0.9
+Provides:   R-MASS = 7.3.23
+Provides:   R-Matrix = 1.0.11
+Obsoletes:  R-Matrix  1.0.11
 Provides:   R-boot = 1.3.7
 Provides:   R-class = 7.3.5
 Provides:   R-cluster = 1.14.3
 Provides:   R-codetools = 0.2.8
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
-Provides:   R-foreign = 0.8.51
+Provides:   R-foreign = 0.8.52
 Provides:   R-grDevices = %{version}
 Provides:   R-graphics = %{version}
 Provides:   R-grid = %{version}
-Provides:   R-lattice = 0.20.10
+Provides:   R-lattice = 0.20.13
 Provides:   R-methods = %{version}
 Provides:   R-mgcv = 1.7.22
-Provides:   R-nlme = 3.1.105
+Provides:   R-nlme = 3.1.108
 Provides:   R-nnet = 7.3.5
-Provides:   R-rpart = 3.1.55
+Provides:   R-rpart = 4.1.0
 Provides:   R-spatial = 7.3.5
 Provides:   R-splines = %{version}
 Provides:   R-stats = %{version}
 Provides:   R-stats4 = %{version}
-Provides:   R-survival = 2.36.14
+Provides:   R-survival = 2.37.2
 Provides:   R-tcltk = %{version}
 Provides:   R-tools = %{version}
 Provides:   R-utils = %{version}
@@ -114,10 +114,10 @@
 %package -n R-base-devel
 Summary:Libraries and includefiles for developing with R-base
 Group:  

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2012-11-02 17:31:13

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2012-07-12 
10:51:59.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2012-11-02 
17:31:14.0 +0100
@@ -1,0 +2,7 @@
+Fri Oct 26 12:35:44 UTC 2012 - detlef.ste...@gmx.de
+
+- Upstream  release 2.15.2
+- see, as usual, /usr/lib/R/doc/NEWS.html 
+- most relevant change for rpm are some added translation files 
+
+---

Old:

  R-2.15.1.tar.bz2

New:

  R-2.15.2.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.pmafJi/_old  2012-11-02 17:31:17.0 +0100
+++ /var/tmp/diff_new_pack.pmafJi/_new  2012-11-02 17:31:17.0 +0100
@@ -18,7 +18,7 @@
 
 Name:   R-base
 %define release 1 
-Version:2.15.1
+Version:2.15.2
 Release:%release
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
@@ -71,33 +71,34 @@
 Requires:   cairo = 1.2
 Requires:   fontconfig
 Requires:   freetype2
+Requires:   glibc-locale
 Requires:   readline
 Requires:   xdg-utils
 Requires:   xorg-x11-fonts-100dpi
 Requires:   xorg-x11-fonts-75dpi
 
 Provides:   R = %{version}
-Provides:   R-KernSmooth = 2.23.7
-Provides:   R-MASS = 7.3.18
-Provides:   R-Matrix = 1.0.6
-Obsoletes:  R-Matrix  1.0.6
-Provides:   R-boot = 1.3.4
-Provides:   R-class = 7.3.3
-Provides:   R-cluster = 1.14.2
+Provides:   R-KernSmooth = 2.23.8
+Provides:   R-MASS = 7.3.22
+Provides:   R-Matrix = 1.0.9
+Obsoletes:  R-Matrix  1.0.9
+Provides:   R-boot = 1.3.7
+Provides:   R-class = 7.3.5
+Provides:   R-cluster = 1.14.3
 Provides:   R-codetools = 0.2.8
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
-Provides:   R-foreign = 0.8.50
+Provides:   R-foreign = 0.8.51
 Provides:   R-grDevices = %{version}
 Provides:   R-graphics = %{version}
 Provides:   R-grid = %{version}
-Provides:   R-lattice = 0.20.6
+Provides:   R-lattice = 0.20.10
 Provides:   R-methods = %{version}
-Provides:   R-mgcv = 1.7.18
-Provides:   R-nlme = 3.1.104
-Provides:   R-nnet = 7.3.1
-Provides:   R-rpart = 3.1.53
-Provides:   R-spatial = 7.3.3
+Provides:   R-mgcv = 1.7.22
+Provides:   R-nlme = 3.1.105
+Provides:   R-nnet = 7.3.5
+Provides:   R-rpart = 3.1.55
+Provides:   R-spatial = 7.3.5
 Provides:   R-splines = %{version}
 Provides:   R-stats = %{version}
 Provides:   R-stats4 = %{version}
@@ -113,10 +114,10 @@
 %package -n R-base-devel
 Summary:Libraries and includefiles for developing with R-base
 Group:  Development/Libraries/Other
-Provides:   R-Matrix-devel = 1.0.6
+Provides:   R-Matrix-devel = 1.0.9
 Provides:   R-devel = %{version}
 Requires:   R-base
-Obsoletes:  R-Matrix-devel  1.0.6
+Obsoletes:  R-Matrix-devel  1.0.9
 
 %description -n R-base-devel
 This package provides the necessary development headers and
@@ -213,6 +214,7 @@
 %lang(it) %{_libdir}/R/library/base/po/it/
 %lang(ja) %{_libdir}/R/library/base/po/ja/
 %lang(ko) %{_libdir}/R/library/base/po/ko/
+%lang(nn) %{_libdir}/R/library/base/po/nn/
 %lang(pl) %{_libdir}/R/library/base/po/pl/
 %lang(pt) %{_libdir}/R/library/base/po/pt*/
 %lang(ru) %{_libdir}/R/library/base/po/ru/
@@ -233,6 +235,7 @@
 %lang(de) %{_libdir}/R/library/boot/po/de/
 %lang(en) %{_libdir}/R/library/boot/po/en*/
 %lang(fr) %{_libdir}/R/library/boot/po/fr/
+%lang(pl) %{_libdir}/R/library/boot/po/pl/
 %lang(ru) %{_libdir}/R/library/boot/po/ru/
 %{_libdir}/R/library/boot/R/
 # class
@@ -251,6 +254,7 @@
 %lang(de) %{_libdir}/R/library/class/po/de/
 %lang(en) %{_libdir}/R/library/class/po/en*/
 %lang(fr) %{_libdir}/R/library/class/po/fr/
+%lang(pl) %{_libdir}/R/library/class/po/pl/
 %{_libdir}/R/library/class/R/
 # cluster
 %dir %{_libdir}/R/library/cluster/
@@ -267,6 +271,7 @@
 %dir %{_libdir}/R/library/cluster/po/
 %lang(de) %{_libdir}/R/library/cluster/po/de/
 %lang(en) %{_libdir}/R/library/cluster/po/en*/
+%lang(pl) %{_libdir}/R/library/cluster/po/pl/
 # codetools
 %dir %{_libdir}/R/library/codetools/
 %{_libdir}/R/library/codetools/DESCRIPTION
@@ -291,6 +296,7 @@
 %lang(en) %{_libdir}/R/library/compiler/po/en*/
 %lang(fr) %{_libdir}/R/library/compiler/po/fr/
 %lang(ja) %{_libdir}/R/library/compiler/po/ja/
+%lang(ko) 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2012-06-26 17:27:40

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2012-04-23 
09:16:48.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2012-06-26 
17:27:42.0 +0200
@@ -1,0 +2,23 @@
+Fri Jun 22 14:22:25 UTC 2012 - detlef.ste...@gmx.de
+
+- Fixed: R-base-2.15.1-48.1.x86_64.rpm: directories not owned by a package:
+ - /usr/lib64/R/share/locale/pl
+ - /usr/lib64/R/share/locale/pl/LC_MESSAGES
+   
+---
+Fri Jun 22 13:43:05 UTC 2012 - detlef.ste...@gmx.de
+
+- one more forgotten file in polish translation ... 
+
+---
+Fri Jun 22 12:38:18 UTC 2012 - detlef.ste...@gmx.de
+
+- spec file update to incorporate new polish translation 
+
+---
+Fri Jun 22 11:53:39 UTC 2012 - detlef.ste...@gmx.de
+
+- Upstream bugfix only release 2.15.1
+- see, as usual, /usr/lib/R/doc/NEWS.html 
+
+---

Old:

  R-2.15.0.tar.bz2

New:

  R-2.15.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.UF5Lr2/_old  2012-06-26 17:27:45.0 +0200
+++ /var/tmp/diff_new_pack.UF5Lr2/_new  2012-06-26 17:27:45.0 +0200
@@ -18,7 +18,7 @@
 
 Name:   R-base
 %define release 1 
-Version:2.15.0
+Version:2.15.1
 Release:%release
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
@@ -66,7 +66,7 @@
 
 Provides:   R = %{version}
 Provides:   R-KernSmooth = 2.23.7
-Provides:   R-MASS = 7.3.17
+Provides:   R-MASS = 7.3.18
 Provides:   R-Matrix = 1.0.6
 Obsoletes:  R-Matrix  1.0.6
 Provides:   R-boot = 1.3.4
@@ -75,21 +75,21 @@
 Provides:   R-codetools = 0.2.8
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
-Provides:   R-foreign = 0.8.49
+Provides:   R-foreign = 0.8.50
 Provides:   R-grDevices = %{version}
 Provides:   R-graphics = %{version}
 Provides:   R-grid = %{version}
 Provides:   R-lattice = 0.20.6
 Provides:   R-methods = %{version}
-Provides:   R-mgcv = 1.7.13
-Provides:   R-nlme = 3.1.103
+Provides:   R-mgcv = 1.7.18
+Provides:   R-nlme = 3.1.104
 Provides:   R-nnet = 7.3.1
-Provides:   R-rpart = 3.1.52
+Provides:   R-rpart = 3.1.53
 Provides:   R-spatial = 7.3.3
 Provides:   R-splines = %{version}
 Provides:   R-stats = %{version}
 Provides:   R-stats4 = %{version}
-Provides:   R-survival = 2.36.12
+Provides:   R-survival = 2.36.14
 Provides:   R-tcltk = %{version}
 Provides:   R-tools = %{version}
 Provides:   R-utils = %{version}
@@ -201,6 +201,7 @@
 %lang(it) %{_libdir}/R/library/base/po/it/
 %lang(ja) %{_libdir}/R/library/base/po/ja/
 %lang(ko) %{_libdir}/R/library/base/po/ko/
+%lang(pl) %{_libdir}/R/library/base/po/pl/
 %lang(pt) %{_libdir}/R/library/base/po/pt*/
 %lang(ru) %{_libdir}/R/library/base/po/ru/
 %lang(tr) %{_libdir}/R/library/base/po/tr/
@@ -278,6 +279,7 @@
 %lang(en) %{_libdir}/R/library/compiler/po/en*/
 %lang(fr) %{_libdir}/R/library/compiler/po/fr/
 %lang(ja) %{_libdir}/R/library/compiler/po/ja/
+%lang(pl) %{_libdir}/R/library/compiler/po/pl/
 %lang(pt) %{_libdir}/R/library/compiler/po/pt_BR/
 %lang(ru) %{_libdir}/R/library/compiler/po/ru/
 %lang(zh_CN) %{_libdir}/R/library/compiler/po/zh_CN/
@@ -323,6 +325,7 @@
 %lang(it) %{_libdir}/R/library/graphics/po/it/
 %lang(ja) %{_libdir}/R/library/graphics/po/ja/
 %lang(ko) %{_libdir}/R/library/graphics/po/ko/
+%lang(pl) %{_libdir}/R/library/graphics/po/pl/
 %lang(pt_BR) %{_libdir}/R/library/graphics/po/pt_BR/
 %lang(ru) %{_libdir}/R/library/graphics/po/ru/
 %lang(zh) %{_libdir}/R/library/graphics/po/zh*/
@@ -347,6 +350,7 @@
 %lang(it) %{_libdir}/R/library/grDevices/po/it/
 %lang(ja) %{_libdir}/R/library/grDevices/po/ja/
 %lang(ko) %{_libdir}/R/library/grDevices/po/ko/
+%lang(pl) %{_libdir}/R/library/grDevices/po/pl/
 %lang(pt_BR) %{_libdir}/R/library/grDevices/po/pt_BR/
 %lang(ru) %{_libdir}/R/library/grDevices/po/ru/
 %lang(zh) %{_libdir}/R/library/grDevices/po/zh*/
@@ -369,6 +373,7 @@
 %lang(it) %{_libdir}/R/library/grid/po/it/
 %lang(ja) %{_libdir}/R/library/grid/po/ja/
 %lang(ko) %{_libdir}/R/library/grid/po/ko/
+%lang(pl) %{_libdir}/R/library/grid/po/pl/
 %lang(pt) 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2012-04-23 09:16:39

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2012-04-12 
09:51:08.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2012-04-23 
09:16:48.0 +0200
@@ -1,0 +2,6 @@
+Tue Apr 10 21:51:18 UTC 2012 - gre...@opensuse.org
+
+- make R-base-devel require R-base as some packages think this
+  dependancy is already there (i.e. some KDE packages).
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.zv9um2/_old  2012-04-23 09:16:50.0 +0200
+++ /var/tmp/diff_new_pack.zv9um2/_new  2012-04-23 09:16:50.0 +0200
@@ -103,6 +103,7 @@
 Group:  Development/Libraries/Other
 Provides:   R-Matrix-devel = 1.0.6
 Provides:   R-devel = %{version}
+Requires:   R-base
 Obsoletes:  R-Matrix-devel  1.0.6
 
 %description -n R-base-devel

-- 
To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, e-mail: opensuse-commit+h...@opensuse.org

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2012-04-12 09:48:26

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2012-03-12 
08:54:22.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2012-04-12 
09:48:28.0 +0200
@@ -1,0 +2,6 @@
+Fri Mar 30 09:26:11 UTC 2012 - detlef.ste...@gmx.de
+
+- Upstream updated to 2.15.0
+- see, as usual, /usr/lib/R/doc/NEWS.html 
+
+---

Old:

  R-2.14.2.tar.bz2

New:

  R-2.15.0.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.mpRriS/_old  2012-04-12 09:48:30.0 +0200
+++ /var/tmp/diff_new_pack.mpRriS/_new  2012-04-12 09:48:30.0 +0200
@@ -16,40 +16,59 @@
 #
 
 
-
 Name:   R-base
 %define release 1 
-Version:2.14.2
+Version:2.15.0
 Release:%release
-#Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
 Source: R-%{version}.tar.bz2
+#Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
 
-License:GPL-2.0 or GPL-3.0
 Url:http://www.r-project.org/
-Group:  Productivity/Scientific/Math
 
 Summary:R - statistics package (S-Plus like)
+License:GPL-2.0 or GPL-3.0
+Group:  Productivity/Scientific/Math
 BuildRoot:  %{_tmppath}/%{name}-%{version}-build
-BuildRequires:  cairo-devel gcc gcc-c++
+BuildRequires:  cairo-devel
+BuildRequires:  gcc
+BuildRequires:  gcc-c++
 BuildRequires:  gcc-fortran
+BuildRequires:  libjpeg-devel
+BuildRequires:  libpng-devel
+BuildRequires:  libtiff-devel
 BuildRequires:  perl
-BuildRequires:  libjpeg-devel libpng-devel libtiff-devel readline-devel
+BuildRequires:  readline-devel
 %if %suse_version =1020
-BuildRequires:  te_latex tetex
+BuildRequires:  te_latex
+BuildRequires:  tetex
 %endif
 %if %suse_version  1020
-BuildRequires:  texlive-bin texlive-bin-latex texlive-latex
 BuildRequires:  fdupes
+BuildRequires:  texlive-bin
+BuildRequires:  texlive-bin-latex
+BuildRequires:  texlive-latex
 %endif
 %if %suse_version  1120 
 BuildRequires:  texlive-fonts-extra
 %endif
-BuildRequires:  pango-devel tcl-devel texinfo tk-devel xorg-x11-devel
-Requires:   readline, xorg-x11-fonts-100dpi
-Requires:   xorg-x11-fonts-75dpi, cairo = 1.2
-Requires:   fontconfig, freetype2, xdg-utils
+BuildRequires:  pango-devel
+BuildRequires:  tcl-devel
+BuildRequires:  texinfo
+BuildRequires:  tk-devel
+BuildRequires:  xorg-x11-devel
+Requires:   cairo = 1.2
+Requires:   fontconfig
+Requires:   freetype2
+Requires:   readline
+Requires:   xdg-utils
+Requires:   xorg-x11-fonts-100dpi
+Requires:   xorg-x11-fonts-75dpi
 
 Provides:   R = %{version}
+Provides:   R-KernSmooth = 2.23.7
+Provides:   R-MASS = 7.3.17
+Provides:   R-Matrix = 1.0.6
+Obsoletes:  R-Matrix  1.0.6
 Provides:   R-boot = 1.3.4
 Provides:   R-class = 7.3.3
 Provides:   R-cluster = 1.14.2
@@ -57,19 +76,15 @@
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
 Provides:   R-foreign = 0.8.49
-Provides:   R-graphics = %{version}
 Provides:   R-grDevices = %{version}
+Provides:   R-graphics = %{version}
 Provides:   R-grid = %{version}
-Provides:   R-KernSmooth = 2.23.7
-Provides:   R-lattice = 0.20.0
-Provides:   R-MASS = 7.3.17
-Provides:   R-Matrix = 1.0.4
-Obsoletes:  R-Matrix  1.0.4
+Provides:   R-lattice = 0.20.6
 Provides:   R-methods = %{version}
 Provides:   R-mgcv = 1.7.13
 Provides:   R-nlme = 3.1.103
 Provides:   R-nnet = 7.3.1
-Provides:   R-rpart = 3.1.51
+Provides:   R-rpart = 3.1.52
 Provides:   R-spatial = 7.3.3
 Provides:   R-splines = %{version}
 Provides:   R-stats = %{version}
@@ -84,16 +99,15 @@
 ATT Bell Laboratories by Rick Becker, John Chambers and Allan Wilks.
 
 %package -n R-base-devel
-Summary:Libraries and includefiles for using R as library
+Summary:Libraries and includefiles for developing with R-base
 Group:  Development/Libraries/Other
-Requires:   R = %{version}
+Provides:   R-Matrix-devel = 1.0.6
 Provides:   R-devel = %{version}
-Provides:   R-Matrix-devel = 1.0.2
-Obsoletes:  R-Matrix-devel  1.0.2
+Obsoletes:  R-Matrix-devel  1.0.6
 
 %description -n R-base-devel
 This package provides the necessary development headers and
-libraries to allow you to use R-core as library.
+libraries to allow you to devel with R-base.
 
 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2012-03-12 08:54:19

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2012-03-01 
17:27:06.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2012-03-12 
08:54:22.0 +0100
@@ -1,0 +2,6 @@
+Wed Feb 29 18:00:59 UTC 2012 - detlef.ste...@gmx.de
+
+- upstream minor version increase to 2.14.2 
+- see, as usual, /usr/lib/R/doc/NEWS.html for details.
+
+---

Old:

  R-2.14.1.tar.bz2

New:

  R-2.14.2.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.WLXMsu/_old  2012-03-12 08:54:24.0 +0100
+++ /var/tmp/diff_new_pack.WLXMsu/_new  2012-03-12 08:54:24.0 +0100
@@ -19,7 +19,7 @@
 
 Name:   R-base
 %define release 1 
-Version:2.14.1
+Version:2.14.2
 Release:%release
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
 Source: R-%{version}.tar.bz2
@@ -50,31 +50,31 @@
 Requires:   fontconfig, freetype2, xdg-utils
 
 Provides:   R = %{version}
-Provides:   R-boot = 1.3.3
+Provides:   R-boot = 1.3.4
 Provides:   R-class = 7.3.3
-Provides:   R-cluster = 1.14.1
+Provides:   R-cluster = 1.14.2
 Provides:   R-codetools = 0.2.8
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
-Provides:   R-foreign = 0.8.48
+Provides:   R-foreign = 0.8.49
 Provides:   R-graphics = %{version}
 Provides:   R-grDevices = %{version}
 Provides:   R-grid = %{version}
 Provides:   R-KernSmooth = 2.23.7
 Provides:   R-lattice = 0.20.0
-Provides:   R-MASS = 7.3.16
-Provides:   R-Matrix = 1.0.2
-Obsoletes:  R-Matrix  1.0.2
+Provides:   R-MASS = 7.3.17
+Provides:   R-Matrix = 1.0.4
+Obsoletes:  R-Matrix  1.0.4
 Provides:   R-methods = %{version}
-Provides:   R-mgcv = 1.7.12
-Provides:   R-nlme = 3.1.102
+Provides:   R-mgcv = 1.7.13
+Provides:   R-nlme = 3.1.103
 Provides:   R-nnet = 7.3.1
-Provides:   R-rpart = 3.1.50
+Provides:   R-rpart = 3.1.51
 Provides:   R-spatial = 7.3.3
 Provides:   R-splines = %{version}
 Provides:   R-stats = %{version}
 Provides:   R-stats4 = %{version}
-Provides:   R-survival = 2.36.10
+Provides:   R-survival = 2.36.12
 Provides:   R-tcltk = %{version}
 Provides:   R-tools = %{version}
 Provides:   R-utils = %{version}
@@ -631,6 +631,7 @@
 %dir %{_libdir}/R/library/survival/
 %{_libdir}/R/library/survival/data/
 %{_libdir}/R/library/survival/doc/
+%{_libdir}/R/library/survival/CITATION
 %{_libdir}/R/library/survival/DESCRIPTION
 %{_libdir}/R/library/survival/help/
 %{_libdir}/R/library/survival/html/

++ R-2.14.1.tar.bz2 - R-2.14.2.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-2.14.1.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-2.14.2.tar.bz2 differ: char 11, line 1

-- 
To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, e-mail: opensuse-commit+h...@opensuse.org

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2012-03-01 17:27:04

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2012-01-05 
13:49:49.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2012-03-01 
17:27:06.0 +0100
@@ -1,0 +2,28 @@
+Fri Feb 17 20:53:49 UTC 2012 - detlef.ste...@gmx.de
+
+- Minor cleanup for easier automativ building of R-patched.spec 
+
+---
+Wed Feb 15 19:41:43 UTC 2012 - detlef.ste...@gmx.de
+
+- changed licence string to GPL-2.0 or GPL-3.0 
+
+---
+Mon Feb 13 22:39:51 UTC 2012 - detlef.ste...@gmx.de
+
+- uninstall rule for R.conf more than useless ... reverted. 
+
+---
+Mon Feb 13 21:59:13 UTC 2012 - detlef.ste...@gmx.de
+
+- Applications like KDE's Cantor search for the R standard library
+- using the library search path. However, in openSUSE's package, 
+- libraries are installed to %{_libdir}/R/lib, hence attempts to 
+- load them from these applications will fail.
+- This revision adds a R.conf file to ld.so.conf.d to enable 
+- searching for libraries where R is installed. Once this change
+- is in, applications are able to use libR.so.
+- Thx to ei...@heavensinferno.net for spotting this.
+- Thought had done this for release of 2.14.0.
+
+---



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.WQafAg/_old  2012-03-01 17:27:09.0 +0100
+++ /var/tmp/diff_new_pack.WQafAg/_new  2012-03-01 17:27:09.0 +0100
@@ -1,7 +1,7 @@
 #
 # spec file for package R-base
 #
-# Copyright (c) 2011 SUSE LINUX Products GmbH, Nuernberg, Germany.
+# Copyright (c) 2012 SUSE LINUX Products GmbH, Nuernberg, Germany.
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -21,10 +21,10 @@
 %define release 1 
 Version:2.14.1
 Release:%release
-Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
+Source: R-%{version}.tar.bz2
 
-License:GPL-2.0 || GPL-3.0
+License:GPL-2.0 or GPL-3.0
 Url:http://www.r-project.org/
 Group:  Productivity/Scientific/Math
 
@@ -49,6 +49,7 @@
 Requires:   xorg-x11-fonts-75dpi, cairo = 1.2
 Requires:   fontconfig, freetype2, xdg-utils
 
+Provides:   R = %{version}
 Provides:   R-boot = 1.3.3
 Provides:   R-class = 7.3.3
 Provides:   R-cluster = 1.14.1
@@ -83,15 +84,16 @@
 ATT Bell Laboratories by Rick Becker, John Chambers and Allan Wilks.
 
 %package -n R-base-devel
-Summary:Libraries and includefiles for developing with R-base
+Summary:Libraries and includefiles for using R as library
 Group:  Development/Libraries/Other
-Requires:   R-base = %{version}
+Requires:   R = %{version}
+Provides:   R-devel = %{version}
 Provides:   R-Matrix-devel = 1.0.2
 Obsoletes:  R-Matrix-devel  1.0.2
 
 %description -n R-base-devel
 This package provides the necessary development headers and
-libraries to allow you to devel with R-base.
+libraries to allow you to use R-core as library.
 
 %prep 
 
@@ -132,6 +134,12 @@
 %fdupes -s $RPM_BUILD_ROOT  
 %endif
 
+# Install ld.so.conf.d file to ensure other applications access the shared lib
+mkdir -p %{buildroot}/etc/ld.so.conf.d
+cat  EOF %{buildroot}/etc/ld.so.conf.d/R.conf
+%{_libdir}/R/lib
+EOF
+
 %post
 /sbin/ldconfig
 %install_info --info-dir=%{_infodir} %{_infodir}/R-exts.info-1.gz
@@ -699,7 +707,7 @@
 %{_libdir}/R/library/utils/Sweave/
 %{_libdir}/R/library/utils/doc/
 
-# R-base main part
+# R-base (core) part
 %doc README
 %{_mandir}/man1/R.1*
 %{_mandir}/man1/Rscript.1*
@@ -756,6 +764,8 @@
 %{_libdir}/R/share/R/
 %{_libdir}/R/share/sh/
 %{_libdir}/R/share/texmf/
+# ld.so.conf
+/etc/ld.so.conf.d/R.conf
 
 %files -n R-base-devel
 %defattr(-, root, root)

-- 
To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, e-mail: opensuse-commit+h...@opensuse.org

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2012-01-05 13:49:48

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2011-11-02 
12:17:55.0 +0100
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2012-01-05 
13:49:49.0 +0100
@@ -1,0 +2,8 @@
+Thu Dec 22 12:19:10 UTC 2011 - ste...@unibw-hamburg.de
+
+- Upstream updated to 2.14.1
+- see, as usual, /usr/lib/R/doc/NEWS.html for details.
+- Only minor bug fixes + workaround for missing inconsolata.sty 
+- on older systems.
+ 
+---

Old:

  R-2.14.0.tar.bz2

New:

  R-2.14.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.IYTrCt/_old  2012-01-05 13:49:51.0 +0100
+++ /var/tmp/diff_new_pack.IYTrCt/_new  2012-01-05 13:49:51.0 +0100
@@ -19,12 +19,12 @@
 
 Name:   R-base
 %define release 1 
-Version:2.14.0
+Version:2.14.1
 Release:%release
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
 
-License:GPL-2.0 or GPL-3.0
+License:GPL-2.0 || GPL-3.0
 Url:http://www.r-project.org/
 Group:  Productivity/Scientific/Math
 
@@ -39,30 +39,33 @@
 %endif
 %if %suse_version  1020
 BuildRequires:  texlive-bin texlive-bin-latex texlive-latex
-BuildRequires:  texlive-fonts-extra
 BuildRequires:  fdupes
 %endif
+%if %suse_version  1120 
+BuildRequires:  texlive-fonts-extra
+%endif
 BuildRequires:  pango-devel tcl-devel texinfo tk-devel xorg-x11-devel
 Requires:   readline, xorg-x11-fonts-100dpi
 Requires:   xorg-x11-fonts-75dpi, cairo = 1.2
 Requires:   fontconfig, freetype2, xdg-utils
+
 Provides:   R-boot = 1.3.3
 Provides:   R-class = 7.3.3
 Provides:   R-cluster = 1.14.1
 Provides:   R-codetools = 0.2.8
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
-Provides:   R-foreign = 0.8.46
+Provides:   R-foreign = 0.8.48
 Provides:   R-graphics = %{version}
 Provides:   R-grDevices = %{version}
 Provides:   R-grid = %{version}
-Provides:   R-KernSmooth = 2.23.6
+Provides:   R-KernSmooth = 2.23.7
 Provides:   R-lattice = 0.20.0
 Provides:   R-MASS = 7.3.16
-Provides:   R-Matrix = 1.0.1
-Obsoletes:  R-Matrix  1.0.1
+Provides:   R-Matrix = 1.0.2
+Obsoletes:  R-Matrix  1.0.2
 Provides:   R-methods = %{version}
-Provides:   R-mgcv = 1.7.9
+Provides:   R-mgcv = 1.7.12
 Provides:   R-nlme = 3.1.102
 Provides:   R-nnet = 7.3.1
 Provides:   R-rpart = 3.1.50
@@ -83,8 +86,8 @@
 Summary:Libraries and includefiles for developing with R-base
 Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
-Provides:   R-Matrix-devel = 1.0.1
-Obsoletes:  R-Matrix-devel  1.0.1
+Provides:   R-Matrix-devel = 1.0.2
+Obsoletes:  R-Matrix-devel  1.0.2
 
 %description -n R-base-devel
 This package provides the necessary development headers and

++ R-2.14.0.tar.bz2 - R-2.14.1.tar.bz2 ++
/work/SRC/openSUSE:Factory/R-base/R-2.14.0.tar.bz2 
/work/SRC/openSUSE:Factory/.R-base.new/R-2.14.1.tar.bz2 differ: char 11, line 1

-- 
To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, e-mail: opensuse-commit+h...@opensuse.org

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2011-12-06 18:59:26

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:




Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.PKwoOm/_old  2011-12-06 20:08:21.0 +0100
+++ /var/tmp/diff_new_pack.PKwoOm/_new  2011-12-06 20:08:21.0 +0100
@@ -24,7 +24,7 @@
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
 
-License:GPLv2 || GPLv3
+License:GPL-2.0 or GPL-3.0
 Url:http://www.r-project.org/
 Group:  Productivity/Scientific/Math
 

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To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
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commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory checked 
in at 2011-11-02 12:17:50

Comparing /work/SRC/openSUSE:Factory/R-base (Old)
 and  /work/SRC/openSUSE:Factory/.R-base.new (New)


Package is R-base, Maintainer is 

Changes:

--- /work/SRC/openSUSE:Factory/R-base/R-base.changes2011-10-11 
16:41:12.0 +0200
+++ /work/SRC/openSUSE:Factory/.R-base.new/R-base.changes   2011-11-02 
12:17:55.0 +0100
@@ -1,0 +2,19 @@
+Mon Oct 31 12:40:03 UTC 2011 - detlef.ste...@gmx.de
+
+- merged change infor Oct 5th into working copy 
+
+---
+Mon Oct 31 12:34:30 UTC 2011 - detlef.ste...@gmx.de
+
+- corrected subpackge version number in R-base-devel 
+
+---
+Mon Oct 31 11:12:24 UTC 2011 - detlef.ste...@gmx.de
+
+- Upstream updated to 2.14.0
+- see, as usual, /usr/lib/R/doc/NEWS.html for details.
+- On system side most important, that /etc/ld.so.conf.d/R-base.conf
+- was added to help third party programs, i.e. rpy2, tp link against 
+- R-base 
+
+---

Old:

  R-2.13.2.tar.bz2

New:

  R-2.14.0.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.E1Jxix/_old  2011-11-02 12:17:59.0 +0100
+++ /var/tmp/diff_new_pack.E1Jxix/_new  2011-11-02 12:17:59.0 +0100
@@ -19,8 +19,8 @@
 
 Name:   R-base
 %define release 1 
-Version:2.13.2
-Release:1
+Version:2.14.0
+Release:%release
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
 
@@ -39,15 +39,16 @@
 %endif
 %if %suse_version  1020
 BuildRequires:  texlive-bin texlive-bin-latex texlive-latex
+BuildRequires:  texlive-fonts-extra
 BuildRequires:  fdupes
 %endif
 BuildRequires:  pango-devel tcl-devel texinfo tk-devel xorg-x11-devel
 Requires:   readline, xorg-x11-fonts-100dpi
 Requires:   xorg-x11-fonts-75dpi, cairo = 1.2
 Requires:   fontconfig, freetype2, xdg-utils
-Provides:   R-boot = 1.3.2
+Provides:   R-boot = 1.3.3
 Provides:   R-class = 7.3.3
-Provides:   R-cluster = 1.14.0
+Provides:   R-cluster = 1.14.1
 Provides:   R-codetools = 0.2.8
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
@@ -56,12 +57,12 @@
 Provides:   R-grDevices = %{version}
 Provides:   R-grid = %{version}
 Provides:   R-KernSmooth = 2.23.6
-Provides:   R-lattice = 0.19.33
-Provides:   R-MASS = 7.3.14
-Provides:   R-Matrix = 0.9996875.3
-Obsoletes:  R-Matrix  0.999375-7
+Provides:   R-lattice = 0.20.0
+Provides:   R-MASS = 7.3.16
+Provides:   R-Matrix = 1.0.1
+Obsoletes:  R-Matrix  1.0.1
 Provides:   R-methods = %{version}
-Provides:   R-mgcv = 1.7.6
+Provides:   R-mgcv = 1.7.9
 Provides:   R-nlme = 3.1.102
 Provides:   R-nnet = 7.3.1
 Provides:   R-rpart = 3.1.50
@@ -69,7 +70,7 @@
 Provides:   R-splines = %{version}
 Provides:   R-stats = %{version}
 Provides:   R-stats4 = %{version}
-Provides:   R-survival = 2.36.9
+Provides:   R-survival = 2.36.10
 Provides:   R-tcltk = %{version}
 Provides:   R-tools = %{version}
 Provides:   R-utils = %{version}
@@ -82,8 +83,8 @@
 Summary:Libraries and includefiles for developing with R-base
 Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
-Provides:   R-Matrix-devel = 0.9996875-3
-Obsoletes:  R-Matrix-devel  0.9996875-3
+Provides:   R-Matrix-devel = 1.0.1
+Obsoletes:  R-Matrix-devel  1.0.1
 
 %description -n R-base-devel
 This package provides the necessary development headers and
@@ -99,7 +100,6 @@
 %configure --enable-R-shlib
 
 make %{?_smp_mflags}
-make dvi
 make pdf
 make info
 # Convert to UTF-8
@@ -113,7 +113,6 @@
 
 %find_lang R
 
-make DESTDIR=%{buildroot} install-dvi
 make DESTDIR=%{buildroot} install-pdf
 
 # Installation of Info-files
@@ -126,12 +125,6 @@
 
 chmod -x %{buildroot}%{_libdir}/R/library/mgcv/CITATION
 
-%__rm  %{buildroot}%{_libdir}/R/library/survival/COPYING
-
-#%%__ln_s %%{_libdir}/R/lib/libR.so %%{buildroot}%%{_libdir}/libR.so
-#%%__ln_s %%{_libdir}/R/lib/libRblas.so %%{buildroot}%%{_libdir}/libRblas.so
-#%%__ln_s %%{_libdir}/R/lib/libRlapack.so 
%%{buildroot}%%{_libdir}/libRlapack.so
-
 %if %suse_version  1020
 %fdupes -s $RPM_BUILD_ROOT  
 %endif
@@ -231,6 +224,9 @@
 %{_libdir}/R/library/cluster/Meta/
 %{_libdir}/R/library/cluster/NAMESPACE
 %{_libdir}/R/library/cluster/R/
+%dir %{_libdir}/R/library/cluster/po/
+%lang(de) %{_libdir}/R/library/cluster/po/de/
+%lang(en) 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory
checked in at Tue Oct 11 16:41:14 CEST 2011.




--- openSUSE:Factory/R-base/R-base.changes  2011-09-23 01:51:14.0 
+0200
+++ /mounts/work_src_done/STABLE/R-base/R-base.changes  2011-10-05 
09:13:36.0 +0200
@@ -1,0 +2,27 @@
+Wed Oct  5 07:13:03 UTC 2011 - detlef.ste...@gmx.de
+
+- corrected version string for Matrix subpackage 
+
+---
+Tue Oct  4 14:00:04 UTC 2011 - detlef.ste...@gmx.de
+
+- removed 4 warnings about unescaped macros in comments
+
+---
+Tue Oct  4 12:13:18 UTC 2011 - detlef.ste...@gmx.de
+
+- explicitly added some locale directories. Worked before implicitly.  
+
+---
+Tue Oct  4 11:10:56 UTC 2011 - detlef.ste...@gmx.de
+
+- update to upstream version 2.13.2
+- see, as usual, /usr/lib/R/doc/NEWS.html for details. 
+
+---
+Sat Sep 17 10:18:38 UTC 2011 - jeng...@medozas.de
+
+- Remove redundant tags/sections from specfile
+- Use %_smp_mflags for parallel build
+
+---

calling whatdependson for head-i586


Old:

  R-2.13.1.tar.bz2

New:

  R-2.13.2.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.23Accu/_old  2011-10-11 16:41:10.0 +0200
+++ /var/tmp/diff_new_pack.23Accu/_new  2011-10-11 16:41:10.0 +0200
@@ -19,7 +19,7 @@
 
 Name:   R-base
 %define release 1 
-Version:2.13.1
+Version:2.13.2
 Release:1
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
@@ -45,25 +45,24 @@
 Requires:   readline, xorg-x11-fonts-100dpi
 Requires:   xorg-x11-fonts-75dpi, cairo = 1.2
 Requires:   fontconfig, freetype2, xdg-utils
-AutoReqProv:Yes
-Provides:   R-boot = 1.3.1
+Provides:   R-boot = 1.3.2
 Provides:   R-class = 7.3.3
 Provides:   R-cluster = 1.14.0
 Provides:   R-codetools = 0.2.8
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
-Provides:   R-foreign = 0.8.44
+Provides:   R-foreign = 0.8.46
 Provides:   R-graphics = %{version}
 Provides:   R-grDevices = %{version}
 Provides:   R-grid = %{version}
 Provides:   R-KernSmooth = 2.23.6
-Provides:   R-lattice = 0.19.30
-Provides:   R-MASS = 7.3.13
-Provides:   R-Matrix = 0.999375.50
+Provides:   R-lattice = 0.19.33
+Provides:   R-MASS = 7.3.14
+Provides:   R-Matrix = 0.9996875.3
 Obsoletes:  R-Matrix  0.999375-7
 Provides:   R-methods = %{version}
 Provides:   R-mgcv = 1.7.6
-Provides:   R-nlme = 3.1.101
+Provides:   R-nlme = 3.1.102
 Provides:   R-nnet = 7.3.1
 Provides:   R-rpart = 3.1.50
 Provides:   R-spatial = 7.3.3
@@ -78,15 +77,13 @@
 %description
 R is a language which is not entirely unlike the S language developed at
 ATT Bell Laboratories by Rick Becker, John Chambers and Allan Wilks.
-AUTHORS: R Core Team
 
 %package -n R-base-devel
-
 Summary:Libraries and includefiles for developing with R-base
 Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
-Provides:   R-Matrix-devel = 0.999375.50
-Obsoletes:  R-Matrix-devel  0.999375-7
+Provides:   R-Matrix-devel = 0.9996875-3
+Obsoletes:  R-Matrix-devel  0.9996875-3
 
 %description -n R-base-devel
 This package provides the necessary development headers and
@@ -97,35 +94,31 @@
 %setup -n R-%{version}
 
 %build 
-
 export R_BROWSER=xdg-open
 export R_PDFVIEWER=xdg-open
 %configure --enable-R-shlib
 
-%__make %{?jobs:-j%{jobs}}
-%__make dvi
-%__make pdf
-%__make info
+make %{?_smp_mflags}
+make dvi
+make pdf
+make info
 # Convert to UTF-8
 for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ 
doc/manual/R-admin.info doc/manual/R-exts.info-1; do
   iconv -f iso-8859-1 -t utf-8 -o $i{.utf8,}
   mv $i{.utf8,}
 done
 
-%check
-
 %install 
-
-%__make DESTDIR=%{buildroot} install
+make DESTDIR=%{buildroot} install
 
 %find_lang R
 
-%__make DESTDIR=%{buildroot} install-dvi
-%__make DESTDIR=%{buildroot} install-pdf
+make DESTDIR=%{buildroot} install-dvi
+make DESTDIR=%{buildroot} install-pdf
 
 # Installation of Info-files
 %{__install} -m 755 -d %{_infodir}
-%{__make} DESTDIR=%{buildroot} INFODIR=%{buildroot}%{_infodir} install-info
+make DESTDIR=%{buildroot} INFODIR=%{buildroot}%{_infodir} install-info
 %{__rm} -f %{buildroot}%{_infodir}/dir
 %{__rm} -f %{buildroot}%{_infodir}/dir.old
 
@@ -167,9 +160,6 @@
 %install_info_delete --info-dir=%{_infodir} %{_infodir}/R-exts.info.gz
 %install_info_delete --info-dir=%{_infodir} 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory
checked in at Mon Jul 11 15:59:05 CEST 2011.




--- R-base/R-base.changes   2011-05-06 09:35:42.0 +0200
+++ /mounts/work_src_done/STABLE/R-base/R-base.changes  2011-07-08 
21:33:59.0 +0200
@@ -1,0 +2,24 @@
+Fri Jul  8 19:32:45 UTC 2011 - detlef.ste...@gmx.de
+
+- resolved some conflicts for R-base.spec after osc up -e  osc pull
+
+---
+Fri Jul  8 12:51:05 UTC 2011 - detlef.ste...@gmx.de
+
+- corrected version string in R-base.spec
+
+---
+Fri Jul  8 11:51:35 UTC 2011 - detlef.ste...@gmx.de
+
+- Upstream updated to 2.13.1. Licence change from GPLv2 to GPLv2 || GPLv3.
+  Packages rpart and survival now GPLed, too.
+  Various minor bugfixes.
+  See /usr/lib/R/doc/NEWS.html for details. 
+
+---
+Thu May 12 13:45:43 UTC 2011 - detlef.ste...@gmx.de
+
+- Removed possible dangerous links of libraries. R`s internal
+  libraries now are only available in $lib/R/lib .
+
+---

calling whatdependson for head-i586


Old:

  R-2.13.0.tar.bz2

New:

  R-2.13.1.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.Lh4zl2/_old  2011-07-11 15:58:09.0 +0200
+++ /var/tmp/diff_new_pack.Lh4zl2/_new  2011-07-11 15:58:09.0 +0200
@@ -19,12 +19,12 @@
 
 Name:   R-base
 %define release 1 
-Version:2.13.0
+Version:2.13.1
 Release:1
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
 
-License:GPLv2
+License:GPLv2 || GPLv3
 Url:http://www.r-project.org/
 Group:  Productivity/Scientific/Math
 
@@ -46,31 +46,31 @@
 Requires:   xorg-x11-fonts-75dpi, cairo = 1.2
 Requires:   fontconfig, freetype2, xdg-utils
 AutoReqProv:Yes
-Provides:   R-boot = 1.2.43
+Provides:   R-boot = 1.3.1
 Provides:   R-class = 7.3.3
-Provides:   R-cluster = 1.13.3
+Provides:   R-cluster = 1.14.0
 Provides:   R-codetools = 0.2.8
 Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
-Provides:   R-foreign = 0.8.43
+Provides:   R-foreign = 0.8.44
 Provides:   R-graphics = %{version}
 Provides:   R-grDevices = %{version}
 Provides:   R-grid = %{version}
-Provides:   R-KernSmooth = 2.23.4
-Provides:   R-lattice = 0.19.23
-Provides:   R-MASS = 7.3.12
+Provides:   R-KernSmooth = 2.23.6
+Provides:   R-lattice = 0.19.30
+Provides:   R-MASS = 7.3.13
 Provides:   R-Matrix = 0.999375.50
 Obsoletes:  R-Matrix  0.999375-7
 Provides:   R-methods = %{version}
-Provides:   R-mgcv = 1.7.5
-Provides:   R-nlme = 3.1.100
+Provides:   R-mgcv = 1.7.6
+Provides:   R-nlme = 3.1.101
 Provides:   R-nnet = 7.3.1
-Provides:   R-rpart = 3.1.49
+Provides:   R-rpart = 3.1.50
 Provides:   R-spatial = 7.3.3
 Provides:   R-splines = %{version}
 Provides:   R-stats = %{version}
 Provides:   R-stats4 = %{version}
-Provides:   R-survival = 2.36.5
+Provides:   R-survival = 2.36.9
 Provides:   R-tcltk = %{version}
 Provides:   R-tools = %{version}
 Provides:   R-utils = %{version}
@@ -135,9 +135,9 @@
 
 %__rm  %{buildroot}%{_libdir}/R/library/survival/COPYING
 
-%__ln_s %{_libdir}/R/lib/libR.so %{buildroot}%{_libdir}/libR.so
-%__ln_s %{_libdir}/R/lib/libRblas.so %{buildroot}%{_libdir}/libRblas.so
-%__ln_s %{_libdir}/R/lib/libRlapack.so %{buildroot}%{_libdir}/libRlapack.so
+#%%__ln_s %%{_libdir}/R/lib/libR.so %%{buildroot}%%{_libdir}/libR.so
+#%%__ln_s %%{_libdir}/R/lib/libRblas.so %%{buildroot}%%{_libdir}/libRblas.so
+#%%__ln_s %%{_libdir}/R/lib/libRlapack.so 
%%{buildroot}%%{_libdir}/libRlapack.so
 
 %if %suse_version  1020
 %fdupes -s $RPM_BUILD_ROOT  
@@ -505,7 +505,7 @@
 %{_libdir}/R/library/rpart/html/
 %{_libdir}/R/library/rpart/INDEX
 %{_libdir}/R/library/rpart/libs/
-%{_libdir}/R/library/rpart/LICENCE
+#%{_libdir}/R/library/rpart/LICENCE
 %{_libdir}/R/library/rpart/Meta/
 %{_libdir}/R/library/rpart/NAMESPACE
 %dir %{_libdir}/R/library/rpart/po
@@ -701,7 +701,7 @@
 %{_libdir}/R/share/R/
 %{_libdir}/R/share/sh/
 %{_libdir}/R/share/texmf/
-%{_libdir}/libR*.so
+##%%{_libdir}/libR*.so
 
 %files -n R-base-devel
 %defattr(-, root, root)

++ R-2.13.0.tar.bz2 - R-2.13.1.tar.bz2 ++
R-base/R-2.13.0.tar.bz2 /mounts/work_src_done/STABLE/R-base/R-2.13.1.tar.bz2 
differ: char 11, line 1






Remember to have fun...

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To unsubscribe, e-mail: opensuse-commit+unsubscr...@opensuse.org
For additional commands, 

commit R-base for openSUSE:Factory

[h_root]

Hello community,

here is the log from the commit of package R-base for openSUSE:Factory
checked in at Thu May 26 16:19:28 CEST 2011.




--- R-base/R-base.changes   2011-03-04 19:14:34.0 +0100
+++ /mounts/work_src_done/STABLE/R-base/R-base.changes  2011-05-06 
09:35:42.0 +0200
@@ -1,0 +2,11 @@
+Fri May  6 07:33:40 UTC 2011 - detlef.ste...@gmx.de
+
+- Changed Licence string to GPLv2, taken from opensuse`s list aof allowed 
+  licences, as requested from coolo
+
+---
+Wed Apr 13 11:13:38 UTC 2011 - detlef.ste...@gmx.de
+
+- Upstream update to 2.13.0; new package 'compiler'; some new language files
+
+---

calling whatdependson for head-i586


Old:

  R-2.12.2.tar.bz2

New:

  R-2.13.0.tar.bz2



Other differences:
--
++ R-base.spec ++
--- /var/tmp/diff_new_pack.z8SpCN/_old  2011-05-26 16:18:15.0 +0200
+++ /var/tmp/diff_new_pack.z8SpCN/_new  2011-05-26 16:18:15.0 +0200
@@ -18,17 +18,16 @@
 
 
 Name:   R-base
-#%define version 2.12.2
 %define release 1 
-
-Version:2.12.2
+Version:2.13.0
 Release:1
 Source: R-%{version}.tar.bz2
 #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz
-License:GPL
+
+License:GPLv2
 Url:http://www.r-project.org/
 Group:  Productivity/Scientific/Math
-#Prefix: %_prefix
+
 Summary:R - statistics package (S-Plus like)
 BuildRoot:  %{_tmppath}/%{name}-%{version}-build
 BuildRequires:  cairo-devel gcc gcc-c++
@@ -51,22 +50,23 @@
 Provides:   R-class = 7.3.3
 Provides:   R-cluster = 1.13.3
 Provides:   R-codetools = 0.2.8
+Provides:   R-compiler = %{version}
 Provides:   R-datasets = %{version}
-Provides:   R-foreign = 0.8.42
+Provides:   R-foreign = 0.8.43
 Provides:   R-graphics = %{version}
 Provides:   R-grDevices = %{version}
 Provides:   R-grid = %{version}
 Provides:   R-KernSmooth = 2.23.4
-Provides:   R-lattice = 0.19.17
-Provides:   R-MASS = 7.3.11
-Provides:   R-Matrix = 0.999375.46
+Provides:   R-lattice = 0.19.23
+Provides:   R-MASS = 7.3.12
+Provides:   R-Matrix = 0.999375.50
 Obsoletes:  R-Matrix  0.999375-7
 Provides:   R-methods = %{version}
-Provides:   R-mgcv = 1.7.3
-Provides:   R-nlme = 3.1.98
+Provides:   R-mgcv = 1.7.5
+Provides:   R-nlme = 3.1.100
 Provides:   R-nnet = 7.3.1
-Provides:   R-rpart = 3.1.48
-Provides:   R-spatial = 7.3.2
+Provides:   R-rpart = 3.1.49
+Provides:   R-spatial = 7.3.3
 Provides:   R-splines = %{version}
 Provides:   R-stats = %{version}
 Provides:   R-stats4 = %{version}
@@ -81,11 +81,11 @@
 AUTHORS: R Core Team
 
 %package -n R-base-devel
-License:GPL
+
 Summary:Libraries and includefiles for developing with R-base
 Group:  Development/Libraries/Other
 Requires:   R-base = %{version}
-Provides:   R-Matrix-devel = 0.999375.46
+Provides:   R-Matrix-devel = 0.999375.50
 Obsoletes:  R-Matrix-devel  0.999375-7
 
 %description -n R-base-devel
@@ -95,9 +95,9 @@
 %prep 
 
 %setup -n R-%{version}
-#%setup
 
 %build
+
 export R_BROWSER=xdg-open
 export R_PDFVIEWER=xdg-open
 %configure --enable-R-shlib
@@ -113,9 +113,9 @@
 done
 
 %check
-#__make check
 
 %install
+
 %__make DESTDIR=%{buildroot} install
 
 %find_lang R
@@ -193,6 +193,7 @@
 %lang(ko) %{_libdir}/R/library/base/po/ko/
 %lang(pt) %{_libdir}/R/library/base/po/pt*/
 %lang(ru) %{_libdir}/R/library/base/po/ru/
+%lang(tr) %{_libdir}/R/library/base/po/tr/
 %lang(zh) %{_libdir}/R/library/base/po/zh*/
 %{_libdir}/R/library/base/R/
 # boot
@@ -249,6 +250,23 @@
 %{_libdir}/R/library/codetools/Meta/
 %{_libdir}/R/library/codetools/NAMESPACE
 %{_libdir}/R/library/codetools/R/
+# compiler
+%dir %{_libdir}/R/library/compiler/
+%{_libdir}/R/library/compiler/DESCRIPTION
+%{_libdir}/R/library/compiler/help/
+%{_libdir}/R/library/compiler/html/
+%{_libdir}/R/library/compiler/INDEX
+%{_libdir}/R/library/compiler/Meta/
+%{_libdir}/R/library/compiler/NAMESPACE
+%{_libdir}/R/library/compiler/R/
+%dir %{_libdir}/R/library/compiler/po
+%lang(de) %{_libdir}/R/library/compiler/po/de/
+%lang(en) %{_libdir}/R/library/compiler/po/en*/
+%lang(fr) %{_libdir}/R/library/compiler/po/fr/
+%lang(ja) %{_libdir}/R/library/compiler/po/ja/
+%lang(pt) %{_libdir}/R/library/compiler/po/pt_BR/
+%lang(ru) %{_libdir}/R/library/compiler/po/ru/
+%lang(zh) %{_libdir}/R/library/compiler/po/zh*/
 # datasets
 %dir %{_libdir}/R/library/datasets/
 %{_libdir}/R/library/datasets/data/
@@ -302,6 +320,7 @@
 %{_libdir}/R/library/grDevices/enc/
 %{_libdir}/R/library/grDevices/help/
 %{_libdir}/R/library/grDevices/html/
+%{_libdir}/R/library/grDevices/icc/
 %{_libdir}/R/library/grDevices/INDEX