[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Susi Lehtola changed: What|Removed |Added Blocks|505154 (FE-SCITECH) | Referenced

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Fedora Update System upda...@fedoraproject.org changed: What|Removed |Added Status|ON_QA |CLOSED

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #33 from Antonio Trande anto.tra...@gmail.com --- (In reply to Fedora Update System from comment #32) libsbml-5.11.0-11.fc21 has been submitted as an update for Fedora 21.

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #34 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- I know ;) If segfaults in tests fairly reliably. I was hoping that this might be caused by some gcc issues and resolve itself on its own. If you could take a look, it'd be

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Fedora Update System upda...@fedoraproject.org changed: What|Removed |Added Status|MODIFIED|ON_QA

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #32 from Fedora Update System upda...@fedoraproject.org --- libsbml-5.11.0-11.fc21 has been submitted as an update for Fedora 21. https://admin.fedoraproject.org/updates/libsbml-5.11.0-11.fc21 -- You are receiving this mail

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Fedora Update System upda...@fedoraproject.org changed: What|Removed |Added Status|ASSIGNED

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl changed: What|Removed |Added Flags|

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #30 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- New Package SCM Request === Package Name: libsbml Short Description: Systems Biology Markup Language Library Upstream URL:

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Jon Ciesla limburg...@gmail.com changed: What|Removed |Added Flags|fedora-cvs? |fedora-cvs+ -- You

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #31 from Jon Ciesla limburg...@gmail.com --- Git done (by process-git-requests). -- You are receiving this mail because: You are on the CC list for the bug. You are always notified about changes to this product and component

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Michel Alexandre Salim mic...@michel-slm.name changed: What|Removed |Added Flags|fedora-review?

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #27 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Spec URL: http://in.waw.pl/~zbyszek/fedora/libsbml.spec SRPM URL: http://in.waw.pl/~zbyszek/fedora/libsbml-5.11.0-10.fc22.src.rpm It seems that the java build is broken.

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #26 from Michel Alexandre Salim mic...@michel-slm.name --- Weird, fails to build locally on my F21 machine: Creating: libsbml.jar CMake Error at

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #25 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Another version, with a fix from https://sourceforge.net/p/sbml/libsbml/393/. It builds on amd64, i386, arm, s390, s390x. There's some glitch in doc generation on

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #24 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- (In reply to Michel Alexandre Salim from comment #23) Issues: === - Packages have proper BuildRequires/Requires on jpackage-utils I think they have. There's

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #23 from Michel Alexandre Salim mic...@michel-slm.name --- Hi both, There are some file ownership issues (see below), and when I build on my local mock instance, somehow the Ruby subpackage includes all the documentation files

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #22 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Fine with me ;) -- You are receiving this mail because: You are on the CC list for the bug. You are always notified about changes to this product and component

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Michel Alexandre Salim mic...@michel-slm.name changed: What|Removed |Added Flags|needinfo?(michel@michel-slm |

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #20 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Ping? -- You are receiving this mail because: You are on the CC list for the bug. You are always notified about changes to this product and component

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Antonio Trande anto.tra...@gmail.com changed: What|Removed |Added Flags|

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #17 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- OK, let's not waste this work. Spec URL: http://in.waw.pl/~zbyszek/fedora/libsbml.spec SRPM URL: http://in.waw.pl/~zbyszek/fedora/libsbml-5.11.0-5.fc22.src.rpm koji:

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #18 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Correct srpm URL: Spec URL: http://in.waw.pl/~zbyszek/fedora/libsbml.spec SRPM URL: http://in.waw.pl/~zbyszek/fedora/libsbml-5.11.0-6.fc22.src.rpm koji:

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #15 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- (In reply to Antonio Trande from comment #14) Why ignore them? Jest plain laziness^W^W minimization of work. Package description has the following text: LibSBML is

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #14 from Antonio Trande anto.tra...@gmail.com --- (In reply to Zbigniew Jędrzejewski-Szmek from comment #13) Spec URL: http://in.waw.pl/~zbyszek/fedora/libsbml.spec SRPM URL:

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #16 from Antonio Trande anto.tra...@gmail.com --- (In reply to Zbigniew Jędrzejewski-Szmek from comment #15) (In reply to Antonio Trande from comment #14) Why ignore them? Jest plain laziness^W^W minimization of work.

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Antonio Trande anto.tra...@gmail.com changed: What|Removed |Added CC|

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl changed: What|Removed |Added Flags|needinfo?(zbys...@in.waw.pl |

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #11 from Antonio Trande anto.tra...@gmail.com --- (In reply to Zbigniew Jędrzejewski-Szmek from comment #10) (In reply to Antonio Trande from coyomment #9) i have seen this review request just now. I opened another one for

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #13 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Spec URL: http://in.waw.pl/~zbyszek/fedora/libsbml.spec SRPM URL: http://in.waw.pl/~zbyszek/fedora/libsbml-5.11.0-5.fc22.src.rpm koji:

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Antonio Trande anto.tra...@gmail.com changed: What|Removed |Added Blocks||505154

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Michel Alexandre Salim mic...@michel-slm.name changed: What|Removed |Added CC|

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #7 from Michel Alexandre Salim mic...@michel-slm.name --- Created attachment 976718 -- https://bugzilla.redhat.com/attachment.cgi?id=976718action=edit License check License check results. The non-LGPL files need to be examined

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #6 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- OK, arm was busted. After talking with upstream, I added ExludeArch: arm. Spec URL: http://in.waw.pl/~zbyszek/fedora/libsbml.spec SRPM URL:

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #5 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- OK, I'm pretty happy with this version. Sorry for the all the updates. This one uses cmake, all tests pass, and documentation is built properly, and there's a python3

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #4 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Koji builds (w/o tests) took approx 3h. And it failed because of an error in the dependecy. Spec URL: http://in.waw.pl/~zbyszek/fedora/libsbml.spec SRPM URL:

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #1 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Tests fail on i686... I'll try to get this fixed, and disable the tests otherwise. -- You are receiving this mail because: You are on the CC list for the bug. You are

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 Michel Alexandre Salim mic...@michel-slm.name changed: What|Removed |Added Status|NEW |ASSIGNED

[Bug 1173159] Review Request: libsbml - Systems Biology Markup Language library

https://bugzilla.redhat.com/show_bug.cgi?id=1173159 --- Comment #3 from Zbigniew Jędrzejewski-Szmek zbys...@in.waw.pl --- Yikes, wrong URLs. But I want to make an update anyway, so let me do this first. I reported build issues upstream [1, 2], and was advised to try cmake instead. But cmake