[petsc-dev] XXXGetContext() in Fortran

2011-11-09 Thread Ethan Coon
asterix:/home/balay/junk/ctx -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] size of PetscInt without grepping include

2011-10-18 Thread Ethan Coon
where these (and the real/complex variable) are all defined? Ethan On Tue, 2011-10-18 at 16:24 -0500, Barry Smith wrote: PETSC_USE_64BIT_INDICES -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289

[petsc-dev] size of PetscInt without grepping include

2011-10-18 Thread Ethan Coon
On Tue, 2011-10-18 at 16:24 -0500, Barry Smith wrote: PETSC_USE_64BIT_INDICES -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289

[petsc-dev] size of PetscInt without grepping include

2011-10-18 Thread Ethan Coon
On Tue, 2011-10-18 at 16:24 -0500, Barry Smith wrote: PETSC_USE_64BIT_INDICES -- Ethan Coon Post-Doctoral Researcher

[petsc-dev] [petsc-maint #89809] 3D DMDAs in petsc-3.2

2011-10-11 Thread Ethan Coon
Sciences, Univ Oxford http://foalab.earth.ox.ac.uk -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] default SNES rtol for single precision builds

2011-09-20 Thread Ethan Coon
Barry -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] [petsc-maint #80119] Re: make install broken on unix?

2011-07-25 Thread Ethan Coon
the namespace is unique, placing the single file within a folder that includes an __init__ (and then likely just gets imported within that __init__), writing a setup.py, etc etc. It's just complete overkill. Ethan -- Ethan Coon Post-Doctoral Researcher

[petsc-dev] [petsc-maint #80119] Re: make install broken on unix?

2011-07-25 Thread Ethan Coon
results to which their experiments lead. -- Norbert Wiener -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] [Fwd: Re: [petsc-users] PETSc recommended visualization packages]

2011-07-19 Thread Ethan Coon
Dalcin dalc...@gmail.com Reply-to: PETSc users list petsc-users at mcs.anl.gov To: PETSc users list petsc-users at mcs.anl.gov Subject: Re: [petsc-users] PETSc recommended visualization packages Date: Thu, 14 Jul 2011 19:34:42 -0300 On 14 July 2011 18:33, Ethan Coon ecoon at lanl.gov wrote: On Thu

[petsc-dev] SETERRQ in fortran

2011-06-15 Thread Ethan Coon
And I assume it's asking too much for SETERRQ() in fortran to trigger the -on_error_attach_debugger? I'm not sure what the limitations are in why it can't call PetscError()... Ethan -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos

[petsc-dev] Arguments that are logically void**

2011-06-06 Thread Ethan Coon
of New Hampshire, Durham, NH 03824 office: Morse Hall 245E phone: +1-603-862-2912 fax: +1-603-862-2771 -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] two quick questions on Fortran style/includes

2011-05-10 Thread Ethan Coon
#endif ! ! Macro for templating between real and complex -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] two quick questions on Fortran style/includes

2011-05-10 Thread Ethan Coon
On Tue, 2011-05-10 at 18:54 +0200, Jed Brown wrote: On Tue, May 10, 2011 at 18:46, Ethan Coon ecoon at lanl.gov wrote: Is there a reason that both .F and .F90 examples are in fixed format, even though .F90 files should be interpreted as free format? I thought

[petsc-dev] two quick questions on Fortran style/includes

2011-05-10 Thread Ethan Coon
On Tue, 2011-05-10 at 19:06 +0200, Jed Brown wrote: On Tue, May 10, 2011 at 19:01, Ethan Coon ecoon at lanl.gov wrote: Then why are there both .F90 and .F examples (e.g. src/ksp/ksp/examples/tutorials/{ex1f.F,ex44f.F90}) if both must work in both formats

[petsc-dev] PetscBag not a PetscObject?

2011-05-10 Thread Ethan Coon
or petsc.mod. Ethan On Fri, 2011-04-08 at 21:55 -0500, Barry Smith wrote: At this time I vote that you add the PetscBagSetOptionsPrefix() directly for Bags and do not turn the Bag into a real PetscObject. Barry On Apr 8, 2011, at 12:29 PM, Ethan Coon wrote: I'm using a couple

[petsc-dev] preparing for a PETSc release

2011-05-09 Thread Ethan Coon
, but even more then get your changes/updates in now. Thanks Barry -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] pushing MASSIVE change to PETSc-dev

2011-04-21 Thread Ethan Coon
On Thu, 2011-04-21 at 10:25 -0500, Barry Smith wrote: Also you need not do VecDestroy(x-y); x-y = 0; since the destroy handles that automatically. Is this true in Fortran as well? Ethan -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los

[petsc-dev] PetscBag not a PetscObject?

2011-04-08 Thread Ethan Coon
-- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] PetscBagSetName in F90

2011-04-05 Thread Ethan Coon
Was there a problem with this patch? Ethan On Wed, 2011-03-30 at 09:53 -0600, Ethan Coon wrote: PetscBagSetName isn't in the fortran world. The patch below adds it (and names a bag in the fortran example case to test). Thanks, Ethan -- Ethan

[petsc-dev] DMDABoundaryType

2011-03-15 Thread Ethan Coon
) + parameter (DMDA_BOUNDARY_PERIODIC = 3) ! ! DMDAInterpolationType On Fri, 2011-03-11 at 09:29 -0700, Ethan Coon wrote: On Thu, 2011-03-10 at 23:53 -0300, Lisandro Dalcin wrote: While updating petsc4py for the latest DMDA chages, and alto taking into account some new in NumPy C

[petsc-dev] DMDABoundaryType

2011-03-14 Thread Ethan Coon
with the fix you mentioned.. [and couple of other fixes] Satish On Fri, 11 Mar 2011, Lisandro Dalcin wrote: On 11 March 2011 20:35, Ethan Coon ecoon at lanl.gov wrote: Ok, here's a patch that makes the below change, and changes the APIs of DMDACreate*D(), DMDAGetInfo

[petsc-dev] DMDABoundaryType

2011-03-14 Thread Ethan Coon
Ok, apparently etags does more than I thought it did... off to RTFM. Thanks, Ethan On Mon, 2011-03-14 at 15:39 +0100, Jed Brown wrote: On Mon, Mar 14, 2011 at 15:34, Ethan Coon ecoon at lanl.gov wrote: Related to this, do you guys have a standard way of finding all

[petsc-dev] DMDABoundaryType

2011-03-11 Thread Ethan Coon
,PetscInt P,PetscInt m,PetscInt n,PetscInt p,PetscInt dof,PetscInt s,const PetscInt lx[],const PetscInt ly[],const PetscInt lz[],DM *da) Ethan -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289

[petsc-dev] DMDABoundaryType

2011-03-11 Thread Ethan Coon
. -- Lisandro Dalcin --- CIMEC (INTEC/CONICET-UNL) Predio CONICET-Santa Fe Colectora RN 168 Km 472, Paraje El Pozo 3000 Santa Fe, Argentina Tel: +54-342-4511594 (ext 1011) Tel/Fax: +54-342-4511169 -- Ethan Coon Post-Doctoral Researcher

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2011-03-10 Thread Ethan Coon
leak memory? I think it also needs a PetscFree(idx) then as well... Will get these fixes in, Ethan -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los Alamos National Laboratory 505-665-8289 http://www.ldeo.columbia.edu/~ecoon/

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2011-03-10 Thread Ethan Coon
these fixes in, With both patches applied, petsc4py testsuite pass cleanly (and mem leaks seems to go away). So I'm more or less confident on your (huge) changes + my (tiny) fixes -- Ethan Coon Post-Doctoral Researcher Applied Mathematics - T-5 Los

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2011-03-10 Thread Ethan Coon
wrote: On Mar 10, 2011, at 5:36 PM, Ethan Coon wrote: The one thing I didn't change is the name of the DMDASetPeriodicity() method, which I wasn't sure what to go to. DMDASetBoundaryType()? Barry Ethan Will get these fixes in, With both patches

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2011-03-02 Thread Ethan Coon
Ethan On Tue, 2010-12-07 at 15:41 -0700, Ethan Coon wrote: On Tue, 2010-12-07 at 13:45 -0600, Barry Smith wrote: DMDA_XYZGHOSTED does not exist for 2d and 3d it was added, I'm guessing, as an experiment and was never in the initial design of DMDA. To fully support it one

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2011-03-02 Thread Ethan Coon
On Wed, 2011-03-02 at 16:26 -0600, Barry Smith wrote: On Mar 2, 2011, at 1:47 PM, Ethan Coon wrote: Ethan, MatSetValues() and VecSetValues() handle negative indices as ignore these entries. Currently VecScatterCreate() does not handle negative indices as ignore

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2011-03-02 Thread Ethan Coon
associated with negative indices nontrivial? Ethan On Tue, 2010-12-07 at 15:41 -0700, Ethan Coon wrote: On Tue, 2010-12-07 at 13:45 -0600, Barry Smith wrote: DMDA_XYZGHOSTED does not exist for 2d and 3d it was added, I'm guessing, as an experiment and was never in the initial design

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2010-12-07 Thread Ethan Coon
{n_dimensions}D, each one of DMDA_PERIODIC/DMDA_GHOSTED/DMDA_NONPERIODIC 3. have many many more values in the enum, representing all combinations of PERIODIC and GHOSTED. Ethan -- - Ethan Coon Post-Doctoral Researcher Mathematical Modeling and Analysis Los

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2010-12-07 Thread Ethan Coon
at least be made backward compatible. At least all of the functionality should be there already (since it's needed in the periodic case)... it's just higher level code that would need to change. Ethan On Dec 7, 2010, at 1:30 PM, Jed Brown wrote: On Tue, Dec 7, 2010 at 20:21, Ethan Coon

[petsc-dev] DMDA_*PERIODIC and DMDA_XYZGHOSTED

2010-12-07 Thread Ethan Coon
initial API choice). Handling anisotropic stencil width would be useful for some problems, but it's a much bigger effort. Jed -- - Ethan Coon Post-Doctoral Researcher Mathematical Modeling and Analysis Los Alamos National Laboratory 505-665-8289

since developing object oriented software is so cumbersome in C and we are all resistent to doing it in C++

2009-12-05 Thread Ethan Coon
than any results to which their experiments lead. -- Norbert Wiener -- --- Ethan Coon DOE CSGF - Graduate Student Dept. Applied Physics Applied

sshfs

2008-04-03 Thread Ethan Coon
-- --- Ethan Coon DOE CSGF - Graduate Student Dept. Applied Physics Applied Mathematics Columbia University 212-854-0415 http://www.ldeo.columbia.edu/~ecoon/ ---

sshfs

2008-04-03 Thread Ethan Coon
My apologies all, wrong reply button... Ethan On Thu, 2008-04-03 at 09:39 -0400, Ethan Coon wrote: hey Aron, Is there a good (preferably non-fink) version of sshfs/fuse for mac? I saw a few options... MacFuse, http://www.pqrs.org/tekezo/macosx/sshfs/ etc any thoughts? ethan