Re: [petsc-dev] [petsc-users] ftp.mcs.anl.gov is down - breaking petsc builds with --download-package

Thanks for getting back to me - must be something about my environment here (ftp might even be blocked currently - although I did try from two different networks). I was able to get what I needed by using "http" for now. Sorry for the traffic. Derek On Thu, Apr 5, 2018 at 4:54 PM Satish Balay

Re: [petsc-dev] upcoming release and testing [v2]

Hi Satish, I'm working on right now on some edits to part of the "Performance Turning" part of the manual. If I can get these edits to a state I'm happy with, I'd like them to go in the release, but I'm not sure if I will have them ready before this evening. --Richard On Thu, Apr 5, 2018 at

Re: [petsc-dev] [petsc-users] ftp.mcs.anl.gov is down - breaking petsc builds with --download-package

Is ftp access down again? The download links on the PETSc website appear to just stall... Derek On Thu, Mar 29, 2018 at 9:52 AM Satish Balay wrote: > ftp.mcs.anl.gov is now back online [serving ftp:// - http:// is not yet > enabled] > > petsc configure builds with

Re: [petsc-dev] upcoming release and testing [v2]

Sure - we can push doc changes without going through the test cycle [just a doc build cycle] thanks, Satish On Thu, 5 Apr 2018, Richard Tran Mills wrote: > Hi Satish, > > I'm working on right now on some edits to part of the "Performance Turning" > part of the manual. If I can get these edits

Re: [petsc-dev] upcoming release and testing [v2]

Hi Satish, I decided that I don't have time to polish things as much as I'd like, so I'll make the significant user manual edit I had in mind after the release. It's something that can wait. I do have some minor doc changes to go into master for the release. I've tested these on my laptop to

[petsc-dev] CMake

Can we remove all packages that use CMake before the next release? See also "/PETSc3/petsc/petsc-pylith/arch-next-debug/externalpackages/hg.eigen/build/CMakeFiles/CMakeOutput.log".CMake Error at /PETSc3/petsc/petsc-pylith/arch-pylith-debug/share/cmake-3.0/Modules/Platform/Darwin.cmake:211

Re: [petsc-dev] upcoming release and testing [v2]

On Thu, 5 Apr 2018, Satish Balay wrote: > I have the following branches in queue for master [via next-tmp - these > builds will start soon] > > origin/balay/update-petsc4py-pre-39 > origin/dalcinl/mat-getset-ops > origin/jczhang/fix-vecscatter-msg-logging > > If next-tmp is clean - I can

Re: [petsc-dev] [petsc-users] ftp.mcs.anl.gov is down - breaking petsc builds with --download-package

Both ftp and http work fine for me.. balay@asterix /home/balay/petsc.x/petsc (balay/test=) $ lftp ftp://ftp.mcs.anl.gov/pub/petsc/externalpackages cd ok, cwd=/pub/petsc/externalpackages lftp ftp.mcs.anl.gov:/pub/petsc/externalpackages> ls |head -rw-r- 1 ftp ftp

Re: [petsc-dev] upcoming release and testing [v2]

On Fri, 6 Apr 2018, Matthew Knepley wrote: > Okay, I pushed fixes for everything I saw except: > > 1) The weird ex56_1 bug. This is only due to feature-dmfield, and > its very strange that this logic error appears on only some > arches. Toby is looking at it, but it should not hold the other

[petsc-dev] More CMake hatred

Error configuring EIGEN with cmake Could not execute "cd /projects/academic/knepley/PETSc3/petsc/arch-master-debug/externalpackages/eigen-eigen-5a0156e40feb/build && /projects/academic/knepley/PETSc3/petsc/arch-master-debug/bin/cmake ..

Re: [petsc-dev] upcoming release and testing [v2]

On Thu, Apr 5, 2018 at 9:05 AM, Matthew Knepley wrote: > On Thu, Apr 5, 2018 at 8:58 AM, Satish Balay wrote: > >> All, >> >> master builds have been clean for the past 2 days [except for some >> timeouts] >> >>

Re: [petsc-dev] More CMake hatred

Matthew Knepley writes: > Error configuring EIGEN with cmake Could not execute "cd > /projects/academic/knepley/PETSc3/petsc/arch-master-debug/externalpackages/eigen-eigen-5a0156e40feb/build > && /projects/academic/knepley/PETSc3/petsc/arch-master-debug/bin/cmake .. >

Re: [petsc-dev] upcoming release and testing [v2]

On Thu, Apr 5, 2018 at 10:34 PM, Satish Balay wrote: > On Fri, 6 Apr 2018, Matthew Knepley wrote: > > > Okay, I pushed fixes for everything I saw except: > > > > > 1) The weird ex56_1 bug. This is only due to feature-dmfield, and > > its very strange that this logic error

Re: [petsc-dev] More CMake hatred

On Thu, Apr 5, 2018 at 11:44 PM, Jed Brown wrote: > Matthew Knepley writes: > > > Error configuring EIGEN with cmake Could not execute "cd > > /projects/academic/knepley/PETSc3/petsc/arch-master- > debug/externalpackages/eigen-eigen-5a0156e40feb/build > >

Re: [petsc-dev] Add PetscFree1() ?

PetscFree and PetscFree1 would be equivalent so I don't think it's needed, but wouldn't object if you feel strongly about it. Lots of macros should not be. I think PetscFree can use PetscFreeA which would evaluate its argument only once while still guaranteeing that it be zeroed. Lisandro

Re: [petsc-dev] upcoming release and testing [v2]

Thanks, Satish! I notice also that, in the stanza beginning "When citing PETSc, please do not refer to this document", Dave May is still missing. Also, that stanza still refers to version 3.7 and 2016. --Richard On Thu, Apr 5, 2018 at 6:26 PM, Balay, Satish wrote: > Thanks!

Re: [petsc-dev] upcoming release and testing [v2]

On Fri, 6 Apr 2018, Matthew Knepley wrote: > On Thu, Apr 5, 2018 at 10:34 PM, Satish Balay wrote: > > > On Fri, 6 Apr 2018, Matthew Knepley wrote: > > > > > Okay, I pushed fixes for everything I saw except: > > > > > > > > 1) The weird ex56_1 bug. This is only due to

Re: [petsc-dev] upcoming release and testing [v2]

Thanks! I pushed some fixes to rmills/doc-add-rmills-to-user-manual. Satish On Fri, 6 Apr 2018, Richard Tran Mills wrote: > Hi Satish, > > I decided that I don't have time to polish things as much as I'd like, so > I'll make the significant user manual edit I had in mind after the release. >

Re: [petsc-dev] upcoming release and testing [v2]

On Fri, 6 Apr 2018, Richard Tran Mills wrote: > Thanks, Satish! I notice also that, in the stanza beginning "When citing > PETSc, please do not refer to this document", Dave May is still missing. pushed to master. > Also, that stanza still refers to version 3.7 and 2016. updated in

Re: [petsc-dev] getting on with the nested timers

On Thu, Apr 5, 2018 at 7:50 AM, Klaij, Christiaan wrote: > ??? In my original email I mention that page and state that the > command line option is working. > > > Were you expecting me to understand from your reply that the > option :ascii_xml somehow translates to >

Re: [petsc-dev] getting on with the nested timers

On Thu, Apr 5, 2018 at 6:15 AM, Klaij, Christiaan wrote: > Barry, > > I'm still trying to use petsc's nested logging with our code. I > have it working for 3.8.3 with the command line option, for > example: > > mpirun -n 3 ./refresco -log_view :performance.xml:ascii_xml > >

Re: [petsc-dev] getting on with the nested timers

On Thu, Apr 5, 2018 at 7:31 AM, Klaij, Christiaan wrote: > Matt, > > I guess you meant to send this link: > > http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Viewer/ > PetscViewerPushFormat.html > No, I meant to send the link I sent. In the section Options Database

Re: [petsc-dev] getting on with the nested timers

??? In my original email I mention that page and state that the command line option is working. Were you expecting me to understand from your reply that the option :ascii_xml somehow translates to PetscViewerPushFormat(viewer,"PETSC_VIEWER_ASCII_XML")? Chris

[petsc-dev] getting on with the nested timers

Barry, I'm still trying to use petsc's nested logging with our code. I have it working for 3.8.3 with the command line option, for example: mpirun -n 3 ./refresco -log_view :performance.xml:ascii_xml This gives the expected performance.xml file. How to get the same without command line options?

Re: [petsc-dev] getting on with the nested timers

Matt, I guess you meant to send this link: http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Viewer/PetscViewerPushFormat.html If so, it doesn't say anything on XML either. But after some trial and error I found the format to be "PETSC_VIEWER_ASCII_XML", so problem solved.

Re: [petsc-dev] upcoming release and testing [v2]

On Thu, Apr 5, 2018 at 8:58 AM, Satish Balay wrote: > All, > > master builds have been clean for the past 2 days [except for some > timeouts] > > http://ftp.mcs.anl.gov/pub/petsc/nightlylogs/archive/ > 2018/04/04/master.html > > However next is still not clean [slightly better

Re: [petsc-dev] FAS indentation

Matt, Is this patch Alp sent - a fix for one of the outstanding issues? If so - which branch should it go into? [or will you check and add it in?] Thanks, Satish On Wed, 4 Apr 2018, Dener, Alp wrote: > > Hi Matt, > > Some notes about this issue: > > 1. > > Correction to my previous

Re: [petsc-dev] upcoming release and testing [v2]

On Thu, 5 Apr 2018, Matthew Knepley wrote: > > > > http://ftp.mcs.anl.gov/pub/petsc/nightlylogs/archive/2018/04/05/next.html > > I think I know all the fixes. I cannot do it until tonight at the earliest. > One of them, FETIDP, is an indentation fix. Once the fixes are in - I think it will take

Re: [petsc-dev] upcoming release and testing [v2]

All, master builds have been clean for the past 2 days [except for some timeouts] http://ftp.mcs.anl.gov/pub/petsc/nightlylogs/archive/2018/04/04/master.html However next is still not clean [slightly better than previous build]

Re: [petsc-dev] upcoming release and testing

Hi Satish, FYI: I added a mention of GPU backends available in the release and fixed missing ul-tags in src/docs/website/documentation/changes/39.html in your balay/release-3.9 branch. Best regards, Karli On 04/02/2018 08:18 PM, Satish Balay wrote: All, It would be good if

Re: [petsc-dev] upcoming release and testing

Hi Satish, I have just updated the dev changes in the branch hongzh/update-dev. Regards, Hong (Mr.) > On Apr 2, 2018, at 12:18 PM, Satish Balay wrote: > > All, > > It would be good if > http://www.mcs.anl.gov/petsc/documentation/changes/dev.html is cheked and > updated

Re: [petsc-dev] upcoming release and testing

Spellcheck fixes for dev.html : - relavant --> relevant - diffencing --> differencing - seperately --> separately Patch also attached. 2018-04-05 17:03 GMT+02:00 Satish Balay : > Thanks Karl! > > BTW: Its best to update dev.html in master [and then I can rebase >

Re: [petsc-dev] upcoming release and testing

Thanks! merged to master. Satish On Thu, 5 Apr 2018, Zhang, Hong wrote: > Hi Satish, > > I have just updated the dev changes in the branch hongzh/update-dev. > > Regards, > Hong (Mr.) > > > On Apr 2, 2018, at 12:18 PM, Satish Balay wrote: > > > > All, > > > > It would

Re: [petsc-dev] upcoming release and testing

Thanks! Added patch to master. Satish On Thu, 5 Apr 2018, Patrick Sanan wrote: > Spellcheck fixes for dev.html : > > - relavant --> relevant > - diffencing --> differencing > - seperately --> separately > > Patch also attached. > > 2018-04-05 17:03 GMT+02:00 Satish Balay :

Re: [petsc-dev] upcoming release and testing

Thanks Karl! BTW: Its best to update dev.html in master [and then I can rebase balay/release-3.9 over master. This way - the commit in balay/release-3.9 is the final commit for the release - and traceable later] So i've moved this commit over to master. Satish On Thu, 5 Apr 2018, Karl Rupp

Re: [petsc-dev] upcoming release and testing [v2]

On Thu, Apr 5, 2018 at 9:28 AM, Satish Balay wrote: > On Thu, 5 Apr 2018, Matthew Knepley wrote: > > > > > > > http://ftp.mcs.anl.gov/pub/petsc/nightlylogs/archive/ > 2018/04/05/next.html > > > > I think I know all the fixes. I cannot do it until tonight at the > earliest. > >