Re: [petsc-dev] configure error at NERSC

2017-08-10 Thread Mark Adams
And NERSC started loading these by default so my manual loads where throwing an error that trigger a false positive in PETSc's configure. Thanks, On Fri, Aug 11, 2017 at 1:39 AM, Jeff Hammond wrote: > I have automated the installation of Autotools for years because of >

Re: [petsc-dev] configure error at NERSC

2017-08-10 Thread Jeff Hammond
I have automated the installation of Autotools for years because of projects like MPICH that live at the bleeding edge of Autotools version space. Feel free to grab https://github.com/jeffhammond/HPCInfo/blob/master/buildscripts/Autotools.md. A more advanced version that may handle

Re: [petsc-dev] configure error at NERSC

2017-08-09 Thread Mark Adams
removing the module loads in my .bashrc file fixed it. I asked NERSC about the auto modules, which are needed for p4est, On Thu, Aug 10, 2017 at 10:56 AM, Mark Adams wrote: > I commented out these module loads in my .bashrc and it seems to get > further. > > This build does

Re: [petsc-dev] configure error at NERSC

2017-08-09 Thread Mark Adams
I commented out these module loads in my .bashrc and it seems to get further. This build does not have p4est. Maybe the module load error broke configure. On Thu, Aug 10, 2017 at 10:43 AM, Mark Adams wrote: > But this is a different failure. I am/was able to get p4est to work

Re: [petsc-dev] configure error at NERSC

2017-08-09 Thread Mark Adams
But this is a different failure. I am/was able to get p4est to work by rerunning configure. Is this failure cause by p4est. NERSC changed a lot of stuff on Edison, that is why I am rebuilding for someone. On Thu, Aug 10, 2017 at 10:34 AM, Tobin Isaac wrote: > > This seems

Re: [petsc-dev] configure error at NERSC

2017-08-09 Thread Tobin Isaac
This seems to be a recurring theme. p4est code is quite stable at the moment. Even though we have `--download-p4est`, it might be a better idea to install p4est once externally to petsc and use `--with-p4est`, especially when getting autotools are a sticking point. Toby On Thu, Aug 10, 2017

Re: [petsc-dev] configure error at NERSC

2017-08-09 Thread Mark Adams
Yea, I saw that. I'll ask NERSC. As I recall the auto stuff was for p4est. It seems to die before that. On Thu, Aug 10, 2017 at 10:21 AM, Matthew Knepley wrote: > On Wed, Aug 9, 2017 at 7:42 PM, Mark Adams wrote: > >> NERSC changed some stuff and my

Re: [petsc-dev] configure error at NERSC

2017-08-09 Thread Matthew Knepley
On Wed, Aug 9, 2017 at 7:42 PM, Mark Adams wrote: > NERSC changed some stuff and my configure is crashing. Any ideas? > It sure looks like you have a module problem: Executing: cc -c -o /tmp/petsc-BbxLhU/config.setCompilers/conftest.o -I/tmp/petsc-BbxLhU/config.setCompilers