Re: [Pharo-users] CDB project

Thx a lot thats exactly what we wanted ! Nicolas. B 2016-03-04 15:49 GMT+01:00 Sven Van Caekenberghe : > I am not sure I understand the question correctly, but the closest > equivalent in Pharo is > > readInto: collection startingAt: offset count: requestedCount > "Read requestedCount elements

Re: [Pharo-users] CDB project

I am not sure I understand the question correctly, but the closest equivalent in Pharo is readInto: collection startingAt: offset count: requestedCount "Read requestedCount elements into collection starting at offset, returning the number of elements read, there could be less elements avail

Re: [Pharo-users] CDB project

Hello, we're looking for a function similar to the function read, having this prototype: public int read(byte[] b, int off, int len) throws IOException (found there: https://docs.oracle.com/javase/7/docs/

Re: [Pharo-users] CDB project

Nicolas Berveglieri writes: > Also we're looking for some help about file reading with pharo. We couldn't > find sufficient info about it on the web, if anyone has a link to share we > would be gratefull. the Pharo Mooc contains a few slides about that: https://ci.inria.fr/pharo-contributi

Re: [Pharo-users] CDB project

hi sorry for responding so late we had a few days off. We checked your link and talked about it with Mr Ducasse, aswell as some bioinfo searchers from inria. They indeed told us that it would be interesting not to have the files size limitation. Since we split the team earlier in 2 different implem

Re: [Pharo-users] CDB project

Hi Nicolas, Thank you for checking. The reason why I ask is because such limit is important for bioinformatics. Next-Generation Sequencing (NGS) machines are generating bigger files (these are typically FASTQ files) everyday, have a look at this cdbfasta forum http://seqanswers.com/forums/showthre

Re: [Pharo-users] CDB project

Hi, Thanks for the question, Tbh we didnt even think about bypassing it. Still we gave it a though because of your mail and we feel like doing so would create some problems. Mainly because its already coded like that in other languages, and a >4GB files wouldn't be able to be used with other langu

Re: [Pharo-users] CDB project

Hello Nicolas, Do you plan to bypass the 4GB index file limit? Cheers, Hernán 2016-02-05 9:53 GMT-03:00 Nicolas Berveglieri : > Hello, > > we're a group of 4 students learning pharo since a few weeks. We picked up > the CDB project (http://cr.yp.to/cdb.html), to hopefully get it done by > marc

Re: [Pharo-users] CDB project

We're going to do it in pure pharo first. If we can make it fast enough, we'll then wrappe the C version so we can compare them. 2016-02-05 15:04 GMT+01:00 Ben Coman : > On Fri, Feb 5, 2016 at 8:53 PM, Nicolas Berveglieri > wrote: > > Hello, > > > > we're a group of 4 students learning pharo sin

Re: [Pharo-users] CDB project

On Fri, Feb 5, 2016 at 8:53 PM, Nicolas Berveglieri wrote: > Hello, > > we're a group of 4 students learning pharo since a few weeks. We picked up > the CDB project (http://cr.yp.to/cdb.html), to hopefully get it done by > march. If you have any specific request about the project let us now. > > O

Re: [Pharo-users] CDB project

On Fri, Feb 05, 2016 at 01:53:08PM +0100, Nicolas Berveglieri wrote: > we're a group of 4 students learning pharo since a few weeks. We picked up > the CDB project (http://cr.yp.to/cdb.html), to hopefully get it done by > march. If you have any specific request about the project let us now. Cool!

[Pharo-users] CDB project

Hello, we're a group of 4 students learning pharo since a few weeks. We picked up the CDB project (http://cr.yp.to/cdb.html), to hopefully get it done by march. If you have any specific request about the project let us now. Oudjail Veis Gamelin Kevin Maroine Maxime Berveglieri Nicolas