[DebianGIS-dev] Bug#579987: FTBFS when python-setuptools is installed
Package: libgdal1-1.6.0 Version: 1.6.3-3+b2 Severity: normal GDAL fails to build when python-setuptools is installed. When I uninstall python-setuptools it builds fine. The error I get is: make[1]: Entering directory `/home/jeroen/src/debian/gdal-1.6.3/swig/python' /usr/bin/python2.6 setup.py install numpy include /usr/lib/python2.6/dist-packages/numpy/core/include setup.py:78: DeprecationWarning: The popen2 module is deprecated. Use the subprocess module. import popen2 running install error: can't create or remove files in install directory The following error occurred while trying to add or remove files in the installation directory: [Errno 13] Permission denied: '/usr/local/lib/python2.6/dist-packages/test-easy-install-13219.write-test' The installation directory you specified (via --install-dir, --prefix, or the distutils default setting) was: /usr/local/lib/python2.6/dist-packages/ Perhaps your account does not have write access to this directory? If the installation directory is a system-owned directory, you may need to sign in as the administrator or root account. If you do not have administrative access to this machine, you may wish to choose a different installation directory, preferably one that is listed in your PYTHONPATH environment variable. For information on other options, you may wish to consult the documentation at: http://peak.telecommunity.com/EasyInstall.html Please make the appropriate changes for your system and try again. make[1]: *** [install] Error 1 make[1]: Leaving directory `/home/jeroen/src/debian/gdal-1.6.3/swig/python' make: *** [build-stamp] Error 2 dpkg-buildpackage: error: debian/rules build gave error exit status 2 -- System Information: Debian Release: squeeze/sid APT prefers testing APT policy: (990, 'testing'), (500, 'unstable'), (1, 'experimental') Architecture: amd64 (x86_64) Kernel: Linux 2.6.32-3-amd64 (SMP w/2 CPU cores) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Versions of packages libgdal1-1.6.0 depends on: ii libc6 2.10.2-6 Embedded GNU C Library: Shared lib ii libcurl3-gnutls 7.20.0-3+b1 Multi-protocol file transfer libra ii libexpat1 2.0.1-7 XML parsing C library - runtime li ii libgcc1 1:4.4.2-9GCC support library ii libgeos-c1 3.2.0-1 Geometry engine for Geographic Inf ii libgif4 4.1.6-9 library for GIF images (library) ii libhdf4-0-alt 4.2r4-10 The Hierarchical Data Format libra ii libhdf5-serial-1.8.4 [l 1.8.4-patch1-1 Hierarchical Data Format 5 (HDF5) ii libjasper1 1.900.1-7The JasPer JPEG-2000 runtime libra ii libjpeg62 6b-16.1 The Independent JPEG Group's JPEG ii libmysqlclient165.1.45-1 MySQL database client library ii libnetcdf4 1:3.6.3-1An interface for scientific data a ii libogdi3.2 3.2.0~beta2-6Open Geographic Datastore Interfac ii libpng12-0 1.2.43-1 PNG library - runtime ii libpq5 8.4.3-1 PostgreSQL C client library ii libsqlite3-03.6.23.1-1 SQLite 3 shared library ii libstdc++6 4.4.2-9 The GNU Standard C++ Library v3 ii libxerces-c28 2.8.0+deb1-2 validating XML parser library for ii odbcinst1debian22.2.14p2-1 Support library for accessing odbc ii unixodbc2.2.14p2-1 ODBC tools libraries ii zlib1g 1:1.2.3.4.dfsg-3 compression library - runtime Versions of packages libgdal1-1.6.0 recommends: pn proj-bin none (no description available) libgdal1-1.6.0 suggests no packages. -- no debconf information ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/pkg-grass-devel
[DebianGIS-dev] Bug#579989: Tries to dlopen libproj.so instead of libproj.so.0
Package: libgdal1-1.6.0 Version: 1.6.3-3+b2 Severity: normal Tags: patch I'm getting the following error: ERROR 6: Unable to load PROJ.4 library (libproj.so), creation of OGRCoordinateTransformation failed. This is because GDAL tries to dlopen libproj.so, but it should dlopen libproj.so.0. I tested the attached patch and that fixes the error. -- System Information: Debian Release: squeeze/sid APT prefers testing APT policy: (990, 'testing'), (500, 'unstable'), (1, 'experimental') Architecture: amd64 (x86_64) Kernel: Linux 2.6.32-3-amd64 (SMP w/2 CPU cores) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Versions of packages libgdal1-1.6.0 depends on: ii libc6 2.10.2-6 Embedded GNU C Library: Shared lib ii libcurl3-gnutls 7.20.0-3+b1 Multi-protocol file transfer libra ii libexpat1 2.0.1-7 XML parsing C library - runtime li ii libgcc1 1:4.4.2-9GCC support library ii libgeos-c1 3.2.0-1 Geometry engine for Geographic Inf ii libgif4 4.1.6-9 library for GIF images (library) ii libhdf4-0-alt 4.2r4-10 The Hierarchical Data Format libra ii libhdf5-serial-1.8.4 [l 1.8.4-patch1-1 Hierarchical Data Format 5 (HDF5) ii libjasper1 1.900.1-7The JasPer JPEG-2000 runtime libra ii libjpeg62 6b-16.1 The Independent JPEG Group's JPEG ii libmysqlclient165.1.45-1 MySQL database client library ii libnetcdf4 1:3.6.3-1An interface for scientific data a ii libogdi3.2 3.2.0~beta2-6Open Geographic Datastore Interfac ii libpng12-0 1.2.43-1 PNG library - runtime ii libpq5 8.4.3-1 PostgreSQL C client library ii libsqlite3-03.6.23.1-1 SQLite 3 shared library ii libstdc++6 4.4.2-9 The GNU Standard C++ Library v3 ii libxerces-c28 2.8.0+deb1-2 validating XML parser library for ii odbcinst1debian22.2.14p2-1 Support library for accessing odbc ii unixodbc2.2.14p2-1 ODBC tools libraries ii zlib1g 1:1.2.3.4.dfsg-3 compression library - runtime Versions of packages libgdal1-1.6.0 recommends: pn proj-bin none (no description available) libgdal1-1.6.0 suggests no packages. -- no debconf information #! /bin/sh /usr/share/dpatch/dpatch-run ## libproj.dpatch by jer...@dekkers.ch ## ## All lines beginning with `## DP:' are a description of the patch. ## DP: Dlopen libproj.so.0 instead of libproj.so @DPATCH@ diff -urNad '--exclude=CVS' '--exclude=.svn' '--exclude=.git' '--exclude=.arch' '--exclude=.hg' '--exclude=_darcs' '--exclude=.bzr' gdal-1.6.3~/ogr/ogrct.cpp gdal-1.6.3/ogr/ogrct.cpp --- gdal-1.6.3~/ogr/ogrct.cpp 2008-09-16 10:32:39.0 +0200 +++ gdal-1.6.3/ogr/ogrct.cpp 2010-05-02 21:24:39.087609517 +0200 @@ -80,7 +80,7 @@ #elif defined(__APPLE__) # define LIBNAME libproj.dylib #else -# define LIBNAME libproj.so +# define LIBNAME libproj.so.0 #endif // ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/pkg-grass-devel
[DebianGIS-dev] Bug#579989: Bug#579989: Tries to dlopen libproj.so instead of libproj.so.0
At Mon, 3 May 2010 09:30:08 +0200, Francesco P. Lovergine wrote: On Sun, May 02, 2010 at 10:24:17PM +0200, Jeroen Dekkers wrote: Package: libgdal1-1.6.0 Version: 1.6.3-3+b2 Severity: normal Tags: patch I'm getting the following error: ERROR 6: Unable to load PROJ.4 library (libproj.so), creation of OGRCoordinateTransformation failed. This is because GDAL tries to dlopen libproj.so, but it should dlopen libproj.so.0. I tested the attached patch and that fixes the error. This is a non-sense: fran...@blegrez:~$ ldd /usr/lib/libgdal1.6.0.so|grep proj libproj.so.0 = /usr/lib/libproj.so.0 (0xb4e7) So, _what_ are you doing _exactly_ to get this type of error? But that's because libogdi.so.3 links with libproj: runge:~% objdump -x /usr/lib/libogdi.so.3 | grep NEEDED NEEDED libdl.so.2 NEEDED libz.so.1 NEEDED libexpat.so.1 NEEDED libproj.so.0 NEEDED libm.so.6 NEEDED libc.so.6 libgdal1.6.0.so.1 doesn't link directly to it: runge:~% objdump -p /usr/lib/libgdal1.6.0.so.1 | grep NEEDED NEEDED libgeos_c.so.1 NEEDED libsqlite3.so.0 NEEDED libodbc.so.1 NEEDED libodbcinst.so.1 NEEDED libexpat.so.1 NEEDED libxerces-c.so.28 NEEDED libjasper.so.1 NEEDED libhdf5.so.6 NEEDED libmfhdfalt.so.0 NEEDED libdfalt.so.0 NEEDED libogdi.so.3.2 NEEDED libgif.so.4 NEEDED libjpeg.so.62 NEEDED libpng12.so.0 NEEDED libnetcdf.so.4 NEEDED libpq.so.5 NEEDED libz.so.1 NEEDED libpthread.so.0 NEEDED librt.so.1 NEEDED libdl.so.2 NEEDED libcurl-gnutls.so.4 NEEDED libmysqlclient.so.16 NEEDED libstdc++.so.6 NEEDED libgcc_s.so.1 NEEDED libm.so.6 NEEDED libc.so.6 As far as I understand because GDAL only needs libproj for doing certain kind of conversions. So it does a dlopen() when it needs it, but uses libproj.so instead of libproj.so.0. I found the bug when using the GIS part of django with the OpenStreetMap widget, so that's a bit of a complex test case. But I've also found a bug report for Fedora and they patched it the same way, see http://cvs.fedoraproject.org/viewvc/rpms/gdal/F-13/gdal.spec?revision=1.74view=markup line 170. If you look at the source, ogr/ogrct.cpp is doing pfn_pj_init = (projPJ (*)(int, char**)) CPLGetSymbol( pszLibName, pj_init ); where pszLibName is set to libproj.so earlier in the code, and CPLGetSymbol is a platform independent wrapper defined in port/cplgetsymbol.cp that calls dlopen/dlsym. And that's clearly wrong, as it should always open libproj.so.0. And not just because libproj.so only exists in the libproj-dev package, but if libproj gets a SONAME bump because of an ABI change you would get a library with a different ABI if you dlopen just libproj.so. I hope this explanation clears everything up. Kind regards, Jeroen Dekkers ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/pkg-grass-devel
