Your message dated Fri, 07 Aug 2009 18:03:19 +0000
with message-id <e1mztmh-0008h9...@ries.debian.org>
and subject line Bug#515579: fixed in hdf5 1.8.3-2
has caused the Debian Bug report #515579,
regarding libhdf5-openmpi-dev: mpi.h and mpio.h are not found
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
515579: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=515579
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libhdf5-openmpi-dev
Version: 1.6.6-4
Severity: important
When compiling software against libhdf5-openmpi-dev the headers
mpi.h and mpio.h are not found from /usr/include/H5public.h.
It seems that mpi.h is present at /usr/include/mpi/mpi.h, so
/usr/include/H5public.h should be changed from: "#include <mpi.h>"
to: "#include <mpi/mpi.h>", while mpio.h is not present at all.
-- System Information:
Debian Release: 5.0
APT prefers unstable
APT policy: (500, 'unstable')
Architecture: i386 (i686)
Kernel: Linux 2.6.26-1-686 (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash
Versions of packages libhdf5-openmpi-dev depends on:
ii libc6-dev 2.7-18 GNU C Library: Development Librari
ii libhdf5-openmpi-1.6.6- 1.6.6-4 Hierarchical Data Format 5 (HDF5)
ii libjpeg62-dev 6b-14 Development files for the IJG JPEG
ii libopenmpi-dev 1.3-2 high performance message passing l
ii zlib1g-dev 1:1.2.3.3.dfsg-12 compression library - development
libhdf5-openmpi-dev recommends no packages.
Versions of packages libhdf5-openmpi-dev suggests:
pn libhdf5-doc <none> (no description available)
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: hdf5
Source-Version: 1.8.3-2
We believe that the bug you reported is fixed in the latest version of
hdf5, which is due to be installed in the Debian FTP archive:
hdf5-tools_1.8.3-2_i386.deb
to pool/main/h/hdf5/hdf5-tools_1.8.3-2_i386.deb
hdf5_1.8.3-2.diff.gz
to pool/main/h/hdf5/hdf5_1.8.3-2.diff.gz
hdf5_1.8.3-2.dsc
to pool/main/h/hdf5/hdf5_1.8.3-2.dsc
libhdf5-doc_1.8.3-2_all.deb
to pool/main/h/hdf5/libhdf5-doc_1.8.3-2_all.deb
libhdf5-lam-1.8.3_1.8.3-2_i386.deb
to pool/main/h/hdf5/libhdf5-lam-1.8.3_1.8.3-2_i386.deb
libhdf5-lam-dev_1.8.3-2_i386.deb
to pool/main/h/hdf5/libhdf5-lam-dev_1.8.3-2_i386.deb
libhdf5-mpich-1.8.3_1.8.3-2_i386.deb
to pool/main/h/hdf5/libhdf5-mpich-1.8.3_1.8.3-2_i386.deb
libhdf5-mpich-dev_1.8.3-2_i386.deb
to pool/main/h/hdf5/libhdf5-mpich-dev_1.8.3-2_i386.deb
libhdf5-openmpi-1.8.3_1.8.3-2_i386.deb
to pool/main/h/hdf5/libhdf5-openmpi-1.8.3_1.8.3-2_i386.deb
libhdf5-openmpi-dev_1.8.3-2_i386.deb
to pool/main/h/hdf5/libhdf5-openmpi-dev_1.8.3-2_i386.deb
libhdf5-serial-1.8.3_1.8.3-2_i386.deb
to pool/main/h/hdf5/libhdf5-serial-1.8.3_1.8.3-2_i386.deb
libhdf5-serial-dev_1.8.3-2_i386.deb
to pool/main/h/hdf5/libhdf5-serial-dev_1.8.3-2_i386.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 515...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Francesco Paolo Lovergine <fran...@debian.org> (supplier of updated hdf5
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Thu, 06 Aug 2009 16:40:50 +0200
Source: hdf5
Binary: libhdf5-serial-1.8.3 libhdf5-serial-dev libhdf5-lam-1.8.3
libhdf5-lam-dev libhdf5-openmpi-1.8.3 libhdf5-openmpi-dev libhdf5-mpich-1.8.3
libhdf5-mpich-dev libhdf5-doc hdf5-tools
Architecture: source all i386
Version: 1.8.3-2
Distribution: unstable
Urgency: low
Maintainer: Francesco Paolo Lovergine <fran...@debian.org>
Changed-By: Francesco Paolo Lovergine <fran...@debian.org>
Description:
hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools
libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation
libhdf5-lam-1.8.3 - Hierarchical Data Format 5 (HDF5) - runtime files - LAM
version
libhdf5-lam-dev - Hierarchical Data Format 5 (HDF5) - development files - LAM
versi
libhdf5-mpich-1.8.3 - Hierarchical Data Format 5 (HDF5) - runtime files -
MPICH version
libhdf5-mpich-dev - Hierarchical Data Format 5 (HDF5) - development files -
MPICH ver
libhdf5-openmpi-1.8.3 - Hierarchical Data Format 5 (HDF5) - runtime files -
OpenMPI versi
libhdf5-openmpi-dev - Hierarchical Data Format 5 (HDF5) - development files -
OpenMPI v
libhdf5-serial-1.8.3 - Hierarchical Data Format 5 (HDF5) - runtime files -
serial versio
libhdf5-serial-dev - Hierarchical Data Format 5 (HDF5) - development files -
serial ve
Closes: 470159 501564 515579 519575 537413
Changes:
hdf5 (1.8.3-2) unstable; urgency=low
.
* Uploaded to unstable.
(closes: #519575, #501564, #470159)
* Fixed shlibs.in to avoid wrong interdependencies.
(closes: #537413)
* Added libjpeg-dev as an alternative build-dep and replaced
into the -dev package list of deps.
* [PATCH] mpi.diff added to remove mpio.h including, which
is supefluous for LAM, MPICH and OpenMPI AFAIK.
(closes: #515579)
Checksums-Sha1:
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bc1d4fb86ff9b9daea32b5834db723df41f93057 77500 libhdf5-doc_1.8.3-2_all.deb
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libhdf5-serial-1.8.3_1.8.3-2_i386.deb
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libhdf5-serial-dev_1.8.3-2_i386.deb
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libhdf5-lam-1.8.3_1.8.3-2_i386.deb
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libhdf5-lam-dev_1.8.3-2_i386.deb
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libhdf5-openmpi-1.8.3_1.8.3-2_i386.deb
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libhdf5-openmpi-dev_1.8.3-2_i386.deb
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libhdf5-mpich-1.8.3_1.8.3-2_i386.deb
a8d0001fa5e1ae9ca83ff5207c58ef4a974748af 2256520
libhdf5-mpich-dev_1.8.3-2_i386.deb
0e72645f388e27f718a70350f5863505c6de3555 384594 hdf5-tools_1.8.3-2_i386.deb
Checksums-Sha256:
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hdf5_1.8.3-2.dsc
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hdf5_1.8.3-2.diff.gz
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libhdf5-doc_1.8.3-2_all.deb
e622c4de4c10aba3c0a1fb34e8ae34aed8ca4e50b75df573a9119d9ced417318 1326264
libhdf5-serial-1.8.3_1.8.3-2_i386.deb
5de81c1f233ffe328facdfb2a7ad4cd815bb18cd91587571a7d114bdbffb2e60 2352910
libhdf5-serial-dev_1.8.3-2_i386.deb
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libhdf5-lam-1.8.3_1.8.3-2_i386.deb
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libhdf5-lam-dev_1.8.3-2_i386.deb
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libhdf5-openmpi-1.8.3_1.8.3-2_i386.deb
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libhdf5-mpich-1.8.3_1.8.3-2_i386.deb
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hdf5-tools_1.8.3-2_i386.deb
Files:
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939a5a98db55dc8d136095b6d99276ee 77500 doc optional libhdf5-doc_1.8.3-2_all.deb
285a1d1d09f5bb1a272c9f1fb7f35094 1326264 libs optional
libhdf5-serial-1.8.3_1.8.3-2_i386.deb
2a702428cbb73904b6f1e2c62c36a3c0 2352910 libdevel optional
libhdf5-serial-dev_1.8.3-2_i386.deb
d45af094f3c47994c9b7b4a14e46a954 1141694 libs extra
libhdf5-lam-1.8.3_1.8.3-2_i386.deb
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libhdf5-lam-dev_1.8.3-2_i386.deb
ada320c61f18173fd09df1b6bd92239d 1226742 libs extra
libhdf5-openmpi-1.8.3_1.8.3-2_i386.deb
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libhdf5-openmpi-dev_1.8.3-2_i386.deb
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libhdf5-mpich-1.8.3_1.8.3-2_i386.deb
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libhdf5-mpich-dev_1.8.3-2_i386.deb
4868dc3a9b4b60df5aa0856366569404 384594 science optional
hdf5-tools_1.8.3-2_i386.deb
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--- End Message ---
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