Your message dated Tue, 06 Mar 2012 15:33:42 +0000
with message-id <e1s4wou-0007ud...@franck.debian.org>
and subject line Bug#662749: fixed in netcdf 1:4.1.3-6
has caused the Debian Bug report #662749,
regarding libnetcdfc++5 and libnetcdfc++4: error when trying to install together
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
662749: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=662749
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libnetcdfc++4,libnetcdfc++5
Version: libnetcdfc++4/1:4.1.3-5
Version: libnetcdfc++5/1:4.1.3-4
Severity: serious
User: trei...@debian.org
Usertags: edos-file-overwrite
Date: 2012-03-06
Architecture: amd64
Distribution: sid
Hi,
automatic installation tests of packages that share a file and at the
same time do not conflict by their package dependency relationships has
detected the following problem:
WARNING: The following packages cannot be authenticated!
libkeyutils1 libkrb5support0 libk5crypto3 libkrb5-3 libgssapi-krb5-2
libsasl2-2 libldap-2.4-2 librtmp0 libssh2-1 libcurl3-gnutls libquadmath0
libgfortran3 libhdf5-7 libnetcdfc7 libnetcdfc++4 libnetcdfc++5
Authentication warning overridden.
Can not write log, openpty() failed (/dev/pts not mounted?)
Selecting previously unselected package libkeyutils1.
(Reading database ... 10547 files and directories currently installed.)
Unpacking libkeyutils1 (from .../libkeyutils1_1.5.2-2_amd64.deb) ...
Selecting previously unselected package libkrb5support0.
Unpacking libkrb5support0 (from
.../libkrb5support0_1.10+dfsg~beta1-2_amd64.deb) ...
Selecting previously unselected package libk5crypto3.
Unpacking libk5crypto3 (from .../libk5crypto3_1.10+dfsg~beta1-2_amd64.deb) ...
Selecting previously unselected package libkrb5-3.
Unpacking libkrb5-3 (from .../libkrb5-3_1.10+dfsg~beta1-2_amd64.deb) ...
Selecting previously unselected package libgssapi-krb5-2.
Unpacking libgssapi-krb5-2 (from
.../libgssapi-krb5-2_1.10+dfsg~beta1-2_amd64.deb) ...
Selecting previously unselected package libsasl2-2.
Unpacking libsasl2-2 (from .../libsasl2-2_2.1.25.dfsg1-4_amd64.deb) ...
Selecting previously unselected package libldap-2.4-2.
Unpacking libldap-2.4-2 (from .../libldap-2.4-2_2.4.28-1.1_amd64.deb) ...
Selecting previously unselected package librtmp0.
Unpacking librtmp0 (from .../librtmp0_2.4+20111222.git4e06e21-1_amd64.deb) ...
Selecting previously unselected package libssh2-1.
Unpacking libssh2-1 (from .../libssh2-1_1.2.8-2_amd64.deb) ...
Selecting previously unselected package libcurl3-gnutls.
Unpacking libcurl3-gnutls (from .../libcurl3-gnutls_7.24.0-1_amd64.deb) ...
Selecting previously unselected package libquadmath0.
Unpacking libquadmath0 (from .../libquadmath0_4.6.3-1_amd64.deb) ...
Selecting previously unselected package libgfortran3.
Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_amd64.deb) ...
Selecting previously unselected package libhdf5-7.
Unpacking libhdf5-7 (from .../libhdf5-7_1.8.8-7.1_amd64.deb) ...
Selecting previously unselected package libnetcdfc7.
Unpacking libnetcdfc7 (from .../libnetcdfc7_1%3a4.1.3-5_amd64.deb) ...
Selecting previously unselected package libnetcdfc++4.
Unpacking libnetcdfc++4 (from .../libnetcdfc++4_1%3a4.1.3-5_amd64.deb) ...
Selecting previously unselected package libnetcdfc++5.
Unpacking libnetcdfc++5 (from .../libnetcdfc++5_1%3a4.1.3-4_amd64.deb) ...
dpkg: error processing
/var/cache/apt/archives/libnetcdfc++5_1%3a4.1.3-4_amd64.deb (--unpack):
trying to overwrite '/usr/lib/libnetcdf_c++.so.4.1.0', which is also in
package libnetcdfc++4 1:4.1.3-5
configured to not write apport reports
Processing triggers for man-db ...
Errors were encountered while processing:
/var/cache/apt/archives/libnetcdfc++5_1%3a4.1.3-4_amd64.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)
This is a serious bug as it makes installation fail, and violates
sections 7.6.1 and 10.1 of the policy. An optimal solution would
consist in only one of the packages installing that file, and renaming
or removing the file in the other package. Depending on the
circumstances you might also consider Replace relations or file
diversions. If the conflicting situation cannot be resolved then, as a
last resort, the two packages have to declare a mutual
Conflict. Please take into account that Replaces, Conflicts and
diversions should only be used when packages provide different
implementations for the same functionality.
Here is a list of files that are known to be shared by both packages
(according to the Contents file for sid/amd64, which may be
slightly out of sync):
/usr/lib/libnetcdf_c++.so.4
/usr/lib/libnetcdf_c++.so.4.1.0
This bug has been filed against both packages. If you, the maintainers of
the two packages in question, have agreed on which of the packages will
resolve the problem please reassign the bug to that package. You may then
also register in the BTS that the other package is affected by the bug.
-Ralf.
PS: for more information about the detection of file overwrite errors
of this kind see http://edos.debian.net/file-overwrites/.
--- End Message ---
--- Begin Message ---
Source: netcdf
Source-Version: 1:4.1.3-6
We believe that the bug you reported is fixed in the latest version of
netcdf, which is due to be installed in the Debian FTP archive:
libcf0_4.1.3-6_i386.deb
to main/n/netcdf/libcf0_4.1.3-6_i386.deb
libnetcdf-dev_4.1.3-6_i386.deb
to main/n/netcdf/libnetcdf-dev_4.1.3-6_i386.deb
libnetcdfc++4_4.1.3-6_i386.deb
to main/n/netcdf/libnetcdfc++4_4.1.3-6_i386.deb
libnetcdfc7_4.1.3-6_i386.deb
to main/n/netcdf/libnetcdfc7_4.1.3-6_i386.deb
libnetcdff5_4.1.3-6_i386.deb
to main/n/netcdf/libnetcdff5_4.1.3-6_i386.deb
netcdf-bin_4.1.3-6_i386.deb
to main/n/netcdf/netcdf-bin_4.1.3-6_i386.deb
netcdf-dbg_4.1.3-6_i386.deb
to main/n/netcdf/netcdf-dbg_4.1.3-6_i386.deb
netcdf-doc_4.1.3-6_all.deb
to main/n/netcdf/netcdf-doc_4.1.3-6_all.deb
netcdf_4.1.3-6.debian.tar.gz
to main/n/netcdf/netcdf_4.1.3-6.debian.tar.gz
netcdf_4.1.3-6.dsc
to main/n/netcdf/netcdf_4.1.3-6.dsc
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 662...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Francesco Paolo Lovergine <fran...@debian.org> (supplier of updated netcdf
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 06 Mar 2012 15:46:18 +0100
Source: netcdf
Binary: netcdf-doc libnetcdfc7 libnetcdff5 libnetcdfc++4 libcf0 netcdf-dbg
libnetcdf-dev netcdf-bin
Architecture: source all i386
Version: 1:4.1.3-6
Distribution: unstable
Urgency: low
Maintainer: Debian GIS Project <pkg-grass-devel@lists.alioth.debian.org>
Changed-By: Francesco Paolo Lovergine <fran...@debian.org>
Description:
libcf0 - An interface for scientific data access to large binary data
libnetcdf-dev - Development kit for NetCDF
libnetcdfc++4 - An interface for scientific data access to large binary data
libnetcdfc7 - An interface for scientific data access to large binary data
libnetcdff5 - An interface for scientific data access to large binary data
netcdf-bin - Programs for reading and writing NetCDF files
netcdf-dbg - debugging symbols for NetCDF
netcdf-doc - Documentation for NetCDF and CF
Closes: 662749
Changes:
netcdf (1:4.1.3-6) unstable; urgency=low
.
* Fixed version for conflicting/breaking against libnetcdfc++5.
(closes: #662749)
Checksums-Sha1:
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63114809734df52d8ee97da0d491a6a5784b0483 10964 netcdf_4.1.3-6.debian.tar.gz
72225e13d44dd9676a6e3e520328185c9cc4a9cd 4612002 netcdf-doc_4.1.3-6_all.deb
cbf7583e1690446b7c6bdbfbe0c66706a095ed3b 364404 libnetcdfc7_4.1.3-6_i386.deb
7f1945977ee39380a2c98f2a4fe7b82197ff4995 143752 libnetcdff5_4.1.3-6_i386.deb
ca719e631cdf1ea9816e051dd012e1560284f7f9 65178 libnetcdfc++4_4.1.3-6_i386.deb
f9b56b833664739a6680153137c1b141fc2fe111 52098 libcf0_4.1.3-6_i386.deb
47d04ed54b9def236c8ebdfbbf59c9f962c27d5d 1066052 netcdf-dbg_4.1.3-6_i386.deb
11ffc74d4ca234058953258d0c878f675ea11989 659148 libnetcdf-dev_4.1.3-6_i386.deb
aaffec2c35657741637a93f40f4c919516126626 210530 netcdf-bin_4.1.3-6_i386.deb
Checksums-Sha256:
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netcdf_4.1.3-6.dsc
2c1eccfd72806d3f71c0f19920e881b6aa9db9eb34e74a48fdbd40471ff2e057 10964
netcdf_4.1.3-6.debian.tar.gz
d19d8201c40d2eddde9df03e2a51d5f60edc138b346db1d361a47b1cc3a4dcad 4612002
netcdf-doc_4.1.3-6_all.deb
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libnetcdfc7_4.1.3-6_i386.deb
005b9e05300ddaa9d8ace104b13492ef9905d4f0ef91d9fb732f9a0603643414 143752
libnetcdff5_4.1.3-6_i386.deb
15b3f3bb8511368e925cb56aaddb6496160623e3ce562d1822d1aeacbec10f06 65178
libnetcdfc++4_4.1.3-6_i386.deb
c3bc72efa7cf031fcfb91d854439b3c358d861551f1d9655309919ac742b5501 52098
libcf0_4.1.3-6_i386.deb
c691584f438550057b80bc94dfc24a9e63b5e27a820dfd2cd7a06afb4c36724e 1066052
netcdf-dbg_4.1.3-6_i386.deb
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libnetcdf-dev_4.1.3-6_i386.deb
a77b625091b9e53e13dfb41d5960c16bdb1b30a58a6495ea3e12a9f520edf9bd 210530
netcdf-bin_4.1.3-6_i386.deb
Files:
63db8558196a27734dfe6914a64810c9 1730 science optional netcdf_4.1.3-6.dsc
bca4967b8b35953325a4906aa64348db 10964 science optional
netcdf_4.1.3-6.debian.tar.gz
efb62fa4442fe8d482e1f63333c483f0 4612002 doc optional
netcdf-doc_4.1.3-6_all.deb
d16789084c7b7f593ae145b6639ff46c 364404 libs optional
libnetcdfc7_4.1.3-6_i386.deb
d782b0437d176ca5f225d8c13bcee579 143752 libs optional
libnetcdff5_4.1.3-6_i386.deb
7b161db309a62570df9f7b495d392415 65178 libs optional
libnetcdfc++4_4.1.3-6_i386.deb
738e84a9d42f7b11b4d9fbe105c001c6 52098 libs optional libcf0_4.1.3-6_i386.deb
2a9d7d0471c0a87e67b6959ac3ebd582 1066052 debug extra
netcdf-dbg_4.1.3-6_i386.deb
078661450a0608951eee6ce11318651c 659148 libdevel optional
libnetcdf-dev_4.1.3-6_i386.deb
78b57631a32cc214c3cccb62cee72ef4 210530 science optional
netcdf-bin_4.1.3-6_i386.deb
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--- End Message ---
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