Re: Bug#631019: HDF5 transition from version 1.8.6 = 1.8.8
On Wed, Jan 18, 2012 at 19:34:16 +0100, Sylvestre Ledru wrote: Hello, It has been a long time since the last upload of hdf5 in unstable but here it is, version 1.8.8 is in unstable! And now hdf5 1.8.8 is finally in wheezy. This is not completely over yet, as libhdf5-lam-1.8.4 is still in testing with some reverse dependencies, and as I had to remove some other packages from testing to make progress. Specifically, from a quick look at least these packages still need fixing in testing: - libgpiv (unfixed in sid) - hdf-eos5 (should be ok tomorrow) - jhdf (out of date on kfreebsd-* in sid) - mpb (should be ok tomorrow) - pytables (ftbfs in sid) - tessa (ftbfs in sid) And the following ones were (hopefully temporarily) removed: - gnudatalanguage - plplot - sdpa - ruby-hdfeos5 - petsc - slepc - getdp - illuminator - minc - gmsh - caret - cl-plplot - gpiv - gpivtools - octave-bim octave-msh If you maintain one of those packages and need help getting them back in testing feel free to contact debian-release. Cheers, Julien signature.asc Description: Digital signature ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
Re: HDF5 transition from version 1.8.6 = 1.8.8
Hi, Le 18/01/12 19:34, Sylvestre Ledru a écrit : I need your help with the transition [1]. In most of the cases, a renamed of the build dep libhdf5-serial-dev = libhdf5-dev with a rebuild should be enough. Otherwise, don't hesitate to ping me. Can you specify the preferred exact build dependency? libhdf5-dev as well as libhdf5-dev (= 1.8.8~) don't seem to be enough because libhdf5-dev is a virtual package. I have used libhdf5-dev (= 1.8.8~) | libhdf5-serial-dev. Best regards, Thibaut. signature.asc Description: OpenPGP digital signature ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
Re: HDF5 transition from version 1.8.6 = 1.8.8
Hi, Who from the GIS team is going to build and upload netcdf? I've tested a new release of grads and anything depending on netcdf cannot be built until netcdf is built for 1.8.8. We need to test netcdf against hdf5-1.8.8 (i.e. netcdf4 format); there is netcdf-4.1.3 in experimental ... Regards Alastair On 2012-01-18 18:34, Sylvestre Ledru wrote: Hello, It has been a long time since the last upload of hdf5 in unstable but here it is, version 1.8.8 is in unstable! I need your help with the transition [1]. In most of the cases, a renamed of the build dep libhdf5-serial-dev = libhdf5-dev with a rebuild should be enough. Otherwise, don't hesitate to ping me. While it should not impact you much, changes are important [1]: * Since upstream is now trying to keep a consistent ABI/API, packages have been renamed from libhdf5-xxx-X.Y.Z (X, Y and Z being the version number) to libhdf5-xxx-7 (7 being the version of the soname) * The package libhdf5-serial-* have been renamed to libhdf5-7 or libhdf5-dev * Symbol files have been added for all the libraries. * arm archs have also libhdf5-openmpi-dev * Support of HURD, armhf s390x * Help is now up to date and the debian/html.tgz.uu removed (thanks to the source format v3.0, two source tarballs are now used) * A new package hdf5-helpers which contains h5cc, h5c++ and h5fc has been introduced * Fix many lintian warnings * Java HDF has been updated to version 2.8 There is the list of the impacted packages, sorted by maintainer is available at [3] (I am aware that most of you will received duplicate emails and I apologize). Thanks for the help, Sylvestre [1] http://release.debian.org/transitions/html/hdf5.html [2] It is just a lazy copy paste from my blog: http://sylvestre.ledru.info/blog/sylvestre/2012/01/18/major_changes_in_the_debian_hdf5_package [3] A. Maitland Bottoms bott...@debian.org vtk Alastair McKinstry mckins...@debian.org exodusii grads hdf-eos5 magics++ oasis3 silo-llnl Axel Beckert a...@debian.org gnudatalanguage (U) Carlo Segre se...@debian.org nexus (U) Christoph Schmidt-Hieber chris...@gmx.de stimfit Christophe Trophime christophe.troph...@grenoble.cnrs.fr getdp (U) D Haley my...@yahoo.com mathgl (U) Debian GIS Project pkg-grass-devel@lists.alioth.debian.org gdal h5utils netcdf ruby-hdfeos5 Debian Octave Group pkg-octave-de...@lists.alioth.debian.org octave-bim octave-msh octave3.2 Debian QA Group packa...@qa.debian.org libvigraimpex Debian Science Maintainers debian-science-maintain...@lists.alioth.debian.org mathgl udav Debian Science Team debian-science-maintain...@lists.alioth.debian.org getdp jhdf libcgns scilab Dimitrios Eftaxiopoulos eftax...@otenet.gr mathgl (U) Dirk Eddelbuettel e...@debian.org r-cran-hdf5 Dominique Belhachemi domi...@debian.org vtk (U) Francesco Paolo Lovergine fran...@debian.org gdal (U) h5utils (U) netcdf (U) Gerber van der Graaf gerber_gr...@users.sourceforge.net gpiv gpivtools libgpiv pygpiv Gürkan Sengün gur...@phys.ethz.ch gnudatalanguage Henning Glawe gla...@debian.org libpdl-io-hdf5-perl Josselin Mouette j...@debian.org tessa Juan A. Añel aether...@gulo.org gnudatalanguage (U) Mathieu Malaterre mathieu.malate...@gmail.com vtk (U) Salvatore Bonaccorso car...@debian.org udav (U) Soeren Sonnenburg so...@debian.org h5py shogun Sylvestre Ledru sylves...@debian.org jhdf (U) libcgns (U) scilab (U) Sébastien Villemot sebastien.ville...@ens.fr octave-bim (U) octave-msh (U) Thibaut Paumard paum...@users.sourceforge.net yorick-hdf5 Thomas Weber twe...@debian.org octave-bim (U) octave-msh (U) octave3.2 (U) Thorsten Alteholz deb...@alteholz.de meep meep-mpich meep-openmpi mpb Tobias Stefan Richter tsr-deb...@achos.com nexus Wen Heping wenhep...@gmail.com pytables Yaroslav Halchenko deb...@onerussian.com stimfit (U) Youhei SASAKI uwab...@gfd-dennou.org ruby-hdfeos5 (U) -- Alastair McKinstry , alast...@sceal.ie , mckins...@debian.org http://blog.sceal.ie Anyone who believes exponential growth can go on forever in a finite world is either a madman or an economist - Kenneth Boulter, Economist. ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
Re: Bug#631019: HDF5 transition from version 1.8.6 = 1.8.8
On Thu, Jan 26, 2012 at 13:41:02 +, Alastair McKinstry wrote: Hi, Who from the GIS team is going to build and upload netcdf? I've just scheduled binNMUs for netcdf, there should be no need for a source upload. Cheers, Julien signature.asc Description: Digital signature ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
Re: Bug#631019: HDF5 transition from version 1.8.6 = 1.8.8
On Thu, Jan 26, 2012 at 08:36:47PM +0100, Julien Cristau wrote: On Thu, Jan 26, 2012 at 13:41:02 +, Alastair McKinstry wrote: Hi, Who from the GIS team is going to build and upload netcdf? I've just scheduled binNMUs for netcdf, there should be no need for a source upload. Right, I'm currently working on the experimental branch that will need a specific transition in the next future. Current unstable version is good enough as it is. -- Francesco P. Lovergine ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
HDF5 transition from version 1.8.6 = 1.8.8
Hello, It has been a long time since the last upload of hdf5 in unstable but here it is, version 1.8.8 is in unstable! I need your help with the transition [1]. In most of the cases, a renamed of the build dep libhdf5-serial-dev = libhdf5-dev with a rebuild should be enough. Otherwise, don't hesitate to ping me. While it should not impact you much, changes are important [1]: * Since upstream is now trying to keep a consistent ABI/API, packages have been renamed from libhdf5-xxx-X.Y.Z (X, Y and Z being the version number) to libhdf5-xxx-7 (7 being the version of the soname) * The package libhdf5-serial-* have been renamed to libhdf5-7 or libhdf5-dev * Symbol files have been added for all the libraries. * arm archs have also libhdf5-openmpi-dev * Support of HURD, armhf s390x * Help is now up to date and the debian/html.tgz.uu removed (thanks to the source format v3.0, two source tarballs are now used) * A new package hdf5-helpers which contains h5cc, h5c++ and h5fc has been introduced * Fix many lintian warnings * Java HDF has been updated to version 2.8 There is the list of the impacted packages, sorted by maintainer is available at [3] (I am aware that most of you will received duplicate emails and I apologize). Thanks for the help, Sylvestre [1] http://release.debian.org/transitions/html/hdf5.html [2] It is just a lazy copy paste from my blog: http://sylvestre.ledru.info/blog/sylvestre/2012/01/18/major_changes_in_the_debian_hdf5_package [3] A. Maitland Bottoms bott...@debian.org vtk Alastair McKinstry mckins...@debian.org exodusii grads hdf-eos5 magics++ oasis3 silo-llnl Axel Beckert a...@debian.org gnudatalanguage (U) Carlo Segre se...@debian.org nexus (U) Christoph Schmidt-Hieber chris...@gmx.de stimfit Christophe Trophime christophe.troph...@grenoble.cnrs.fr getdp (U) D Haley my...@yahoo.com mathgl (U) Debian GIS Project pkg-grass-devel@lists.alioth.debian.org gdal h5utils netcdf ruby-hdfeos5 Debian Octave Group pkg-octave-de...@lists.alioth.debian.org octave-bim octave-msh octave3.2 Debian QA Group packa...@qa.debian.org libvigraimpex Debian Science Maintainers debian-science-maintain...@lists.alioth.debian.org mathgl udav Debian Science Team debian-science-maintain...@lists.alioth.debian.org getdp jhdf libcgns scilab Dimitrios Eftaxiopoulos eftax...@otenet.gr mathgl (U) Dirk Eddelbuettel e...@debian.org r-cran-hdf5 Dominique Belhachemi domi...@debian.org vtk (U) Francesco Paolo Lovergine fran...@debian.org gdal (U) h5utils (U) netcdf (U) Gerber van der Graaf gerber_gr...@users.sourceforge.net gpiv gpivtools libgpiv pygpiv Gürkan Sengün gur...@phys.ethz.ch gnudatalanguage Henning Glawe gla...@debian.org libpdl-io-hdf5-perl Josselin Mouette j...@debian.org tessa Juan A. Añel aether...@gulo.org gnudatalanguage (U) Mathieu Malaterre mathieu.malate...@gmail.com vtk (U) Salvatore Bonaccorso car...@debian.org udav (U) Soeren Sonnenburg so...@debian.org h5py shogun Sylvestre Ledru sylves...@debian.org jhdf (U) libcgns (U) scilab (U) Sébastien Villemot sebastien.ville...@ens.fr octave-bim (U) octave-msh (U) Thibaut Paumard paum...@users.sourceforge.net yorick-hdf5 Thomas Weber twe...@debian.org octave-bim (U) octave-msh (U) octave3.2 (U) Thorsten Alteholz deb...@alteholz.de meep meep-mpich meep-openmpi mpb Tobias Stefan Richter tsr-deb...@achos.com nexus Wen Heping wenhep...@gmail.com pytables Yaroslav Halchenko deb...@onerussian.com stimfit (U) Youhei SASAKI uwab...@gfd-dennou.org ruby-hdfeos5 (U) ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel
