Re: New: biology/hmmer

2016-11-09 Thread Senthil Kumar M
Ping. Can anyone commit this please? Senthil On Sun, 6 Nov 2016, Senthil Kumar M wrote: > Hello ports, > > HMMER is used for searching sequence databases for sequence homologs, > and for making sequence alignments. It implements methods using > probabilistic models called profile hidden

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Alexandr Shadchin
CVSROOT:/cvs Module name:ports Changes by: shadc...@cvs.openbsd.org2016/11/09 23:40:49 Modified files: devel/py-dateutil: Makefile distinfo devel/py-dateutil/pkg: PLIST Log message: Update to py-dateutil 2.6.0

Re: krb5-config --libs

2016-11-09 Thread Jeremie Courreges-Anglas
(The heimdal krb5-config diff is in.) Jiri B writes: > On Tue, Nov 01, 2016 at 03:52:00PM -0400, Jiri B wrote: >> With the path and my original path I was able to build curl with >> gssapi and ssl: >> >> $ curl -V >> curl 7.50.3 (x86_64-unknown-openbsd6.0) libcurl/7.50.3

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Alexandr Shadchin
CVSROOT:/cvs Module name:ports Changes by: shadc...@cvs.openbsd.org2016/11/09 23:05:53 Modified files: devel/py-test-mock: Makefile distinfo devel/py-test-mock/pkg: PLIST Log message: Update to py-test-mock 1.4.0

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs Module name:ports Changes by: j...@cvs.openbsd.org2016/11/09 23:01:45 Modified files: security/heimdal: Makefile Added files: security/heimdal/patches: patch-tools_krb5-config_in Log message: Tweak krb5-config to fix rpath and search

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs Module name:ports Changes by: j...@cvs.openbsd.org2016/11/09 22:41:53 Modified files: games/sdlpop : Makefile games/sdlpop/pkg: PLIST Log message: Install Readme.txt, contains documentation about keybindings. ok robert@ (maintainer)

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Gleydson Soares
CVSROOT:/cvs Module name:ports Changes by: gsoa...@cvs.openbsd.org 2016/11/09 16:14:31 Modified files: security/stunnel: Makefile distinfo security/stunnel/patches: patch-src_ctx_c patch-src_options_c patch-src_verify_c

Re: [new] ympd 0.13

2016-11-09 Thread Landry Breuil
On Tue, Nov 01, 2016 at 05:27:47PM +0100, Landry Breuil wrote: > Hi, > > because we all need a new MPD web client, here's one written in C, using > websockets and bootstrap/js, drops privileges to a separate user and > listens on a local port - see https://www.ympd.org/. Works fine here, nice >

Re: net/kea: 1.1.0

2016-11-09 Thread Patrik Lundin
On Mon, Oct 10, 2016 at 12:28:58AM +0200, Patrik Lundin wrote: > Hello, > > See below for an update to net/kea from 1.0.0 to 1.1.0. > Ping. -- Patrik Lundin

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Alexandr Shadchin
CVSROOT:/cvs Module name:ports Changes by: shadc...@cvs.openbsd.org2016/11/09 12:21:39 Modified files: devel/py-country: Makefile distinfo devel/py-country/pkg: PLIST Log message: Update to py-country 16.11.8

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Alexandr Shadchin
CVSROOT:/cvs Module name:ports Changes by: shadc...@cvs.openbsd.org2016/11/09 12:02:58 Modified files: devel/py-xdis : Makefile distinfo Log message: Update to py-xdis 3.2.3

Re: [UPDATE] print/unpaper

2016-11-09 Thread Jiri B
On Wed, Nov 09, 2016 at 05:14:01PM +0100, Antoine Jacoutot wrote: > New diff. Nice, thanks! It's strange I get failure for all F* and G* tests. j. ~~~ === unpaper 6.1: ./test-suite.log === # TOTAL: 19 # PASS: 13 # SKIP: 0 #

Re: openvpn-auth-ldap problem

2016-11-09 Thread Jeremie Courreges-Anglas
Jeremie Courreges-Anglas writes: > "Leclerc, Sebastien" writes: > >>> -Message d'origine- >>> De : Jeremie Courreges-Anglas [mailto:j...@wxcvbn.org] >>> Envoyé : 18 octobre 2016 15:29 >>> >>> Anyway, is the plugin broken right now,

Re: [UPDATE] print/unpaper

2016-11-09 Thread Antoine Jacoutot
> Agreed. And I'm not sure the unpaper.c patch is needed. There's another > version of the ffmpeg patch at https://github.com/Flameeyes/unpaper/pull/42 > but nothing committed upstream. That one is definitely better. It prevents erroring out with: unpaper: error: unable to open file

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs Module name:ports Changes by: j...@cvs.openbsd.org2016/11/09 08:59:37 Modified files: net/samba : Makefile distinfo net/samba/patches: patch-buildtools_wafsamba_samba_autoconf_py patch-lib_replace_wscript

Re: Update: devel/gmp 6.1.1

2016-11-09 Thread Christian Weisgerber
On 2016-11-02, Christian Weisgerber wrote: > This is a long overdue update of devel/gmp to the latest release > (6.1.1). Our old version of devel/mpfr does not build against this and also requires a straightforward update. (See below.) The lang/gcc/4.9 Ada bootstraps will

Re: [UPDATE] print/unpaper

2016-11-09 Thread Stuart Henderson
On 2016/11/09 16:12, Antoine Jacoutot wrote: > On Tue, Nov 08, 2016 at 06:56:45PM -0500, Jiri B wrote: > > Hi, > > > > an update of unpaper, it needs now libav which is part of ffmpeg. > > > > I tooks diffs from pkgsrc who use ffmpeg and not libav directly. > > I can't comment those diff but it

Re: pledge gsm

2016-11-09 Thread Jan Stary
ping On Sep 18 10:47:16, s...@spacehopper.org wrote: > That looks better to me but I am swamped with the sqlite3 move and don't > have time to test at the moment. > > > > On Sep 14 16:50:43, h...@stare.cz wrote: > > > On Sep 13 17:50:12, danj+o...@chown.me wrote: > > > > And can you add # uses

Re: [UPDATE] print/unpaper

2016-11-09 Thread Antoine Jacoutot
On Tue, Nov 08, 2016 at 06:56:45PM -0500, Jiri B wrote: > Hi, > > an update of unpaper, it needs now libav which is part of ffmpeg. > > I tooks diffs from pkgsrc who use ffmpeg and not libav directly. > I can't comment those diff but it works for me on amd64. I don't like adding random patches

Re: pledge iogen

2016-11-09 Thread Jan Stary
ping On Sep 14 19:07:48, h...@stare.cz wrote: > On Sep 14 16:54:52, h...@stare.cz wrote: > > Below please find a patch to pledge sysutils/iogen. > > The "stdio rpath wpath cpath" seems obvious, > > and the "proc" is for killing. I don't know > > if the pledge() could somehow be refined. > > The

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs Module name:ports Changes by: j...@cvs.openbsd.org2016/11/09 07:53:00 Modified files: graphics/imlib2: Makefile distinfo graphics/imlib2/pkg: PLIST Removed files: graphics/imlib2/patches: patch-src_lib_ellipse_c

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs Module name:ports Changes by: j...@cvs.openbsd.org2016/11/09 07:45:56 Modified files: devel/py-cparser: Makefile distinfo devel/py-cparser/pkg: PLIST Log message: Update to pycparser-2.17

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Gonzalo L . Rodriguez
CVSROOT:/cvs Module name:ports Changes by: gonz...@cvs.openbsd.org 2016/11/09 06:50:22 Modified files: security/lynis : Makefile distinfo security/lynis/pkg: PLIST Log message: Update for Lynis to 2.4.0: https://www.cisofy.com/changelog/lynis/2.4.0/ OK benoit@

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Stuart Henderson
CVSROOT:/cvs Module name:ports Changes by: st...@cvs.openbsd.org 2016/11/09 06:25:12 Modified files: comms/fldigi : Makefile distinfo Log message: update to fldigi-3.23.15, including a fix for libsamplerate change

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Antoine Jacoutot
CVSROOT:/cvs Module name:ports Changes by: ajacou...@cvs.openbsd.org 2016/11/09 06:21:25 Modified files: sysutils/ruby-puppet/4: Makefile sysutils/ruby-puppet/4/pkg: PLIST Log message: VARBASE -> LOCALSTATEDIR. Don't hardcode /var. Create the complete

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Stuart Henderson
CVSROOT:/cvs Module name:ports Changes by: st...@cvs.openbsd.org 2016/11/09 04:58:20 Modified files: games/chocolate-doom: Makefile Added files: games/chocolate-doom/patches: patch-src_i_sdlsound_c Log message: add upstream patch to unbreak chocolate-doom

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Stuart Henderson
CVSROOT:/cvs Module name:ports Changes by: st...@cvs.openbsd.org 2016/11/09 04:46:28 Modified files: security/py-cryptography: Makefile distinfo security/py-cryptography_vectors: Makefile distinfo Log message: update to py-cryptography 1.5.3

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Antoine Jacoutot
CVSROOT:/cvs Module name:ports Changes by: ajacou...@cvs.openbsd.org 2016/11/09 04:18:37 Modified files: x11/gnome/mono-gnome: Makefile Added files: x11/gnome/mono-gnome/patches: patch-gconf_GConf_ClientBase_cs

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Antoine Jacoutot
CVSROOT:/cvs Module name:ports Changes by: ajacou...@cvs.openbsd.org 2016/11/09 04:17:02 Modified files: lang/mono : Makefile distinfo Log message: Update to mono-4.6.2.6. ok robert@ (maintainer)

CVS: cvs.openbsd.org: ports

2016-11-09 Thread Kirill Bychkov
CVSROOT:/cvs Module name:ports Changes by: ki...@cvs.openbsd.org 2016/11/09 03:28:19 Modified files: www/goaccess : Makefile distinfo Log message: update to goaccess-1.1

[NEW] textproc/lua-lunamark

2016-11-09 Thread Frederic Cambus
Hi ports@, Here is a new port: textproc/lua-lunamark I originally wanted to also ship the bundled tools but they depend on the 'alt_getopt' module which doesn't work with Lua 5.3 and add a dependency not otherwise useful for other ports. Same for tests, they rely on those bundled tools and yet