Dear all,
I am new to this list, and new to PyMOL, so I appologise if this is an
old question.
Is it possible to alter the transparency of a stick/cartoon model?
I have searched the manual, but have only been able to find how to
change transparency of a surface and that is not what I want to
Mads,
That feature didn't make it into the 0.86 release, but it is in
the current development version. Look for it in the next release.
Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
Hi Warren,
I'm using PyMol to make the figures in a paper I am currently writing.
I know that pymol can generate surfaces at the moment but not charge.
Is there any way to colour a surface by charge in pymol using charges
calculated in grasp? ...or can I import a grasp surface? I heard that
Hi,
can anyone direct me to a url with RGB colours (in the format below)
and their CMYK equivalents? At the moment I'm messing around with the
following kind of thing
set_color cyan2=[0.7, 1.0, 1.0]
I need to use a cyan color in a figure but unfortunately this becomes
very dark when
On Wednesday, April 23, 2003, at 06:30 AM, cami...@mrc-lmb.cam.ac.uk
wrote:
can anyone direct me to a url with RGB colours (in the format below)
and their CMYK equivalents? At the moment I'm messing around with the
following kind of thing
Hi Camille,
One free utility I found very
Camille,
Gil Prive posted a set of CMYK colors before:
http://sourceforge.net/mailarchive/message.php?msg_id=2299470
My only comment was that you don't need to add a preceeding underscore
to his color names -- you can simply redefine the ones which already
exist.
set_color _green= [0.00 , 0.53
Camille,
This capability exists in the development version, but isn't ready for
prime-time yet. Look for it in the next release.
In the meantime, you might try using raster3d to render your grasp
surface, via its ungrasp tool.
Yow, good point! I'm surprise none of us realized this before : ) You
need to change the direction of the light 6 degrees as well.
Try using this sequence to create your stereo pair:
set light=[-0.348,-0.348,-0.870]
ray
png image1.png
turn y,6
set light=[-0.437,-0.348,-0.902]
ray
png
Dear Pymolers,
I started to use Pymol(0.86) from last week and am still new to it.
A complex at my hand contains mol A + B. MolA is hexamer (A1-A6) and B
a monomer. Mol B modifies mol A one by one (please see the diagram
below). when making a movie, is there any easy way to move B around
