Yes, but you need to write in Python directly. For example:
from pymol import cmd
cmd.select("mysel","none")
for i in range(10,20): cmd.select("mysel","mysel or resi %d"%i)
Would work in a ".py" file.
Cheers,
Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal Scient
Hi,
I am new to Pymol with some experiences with Python.
I have a basic question which maybe a little stupid.
Does Pymal take Python commands in selecting atoms?
For instance:
i = range(1, 299)
select resi i
or, further:
for i in range(1, 299)
select resi i
I understand the above can be e
Hello,
Ah, I see why now. I did do a full installation, during which the _cmd and
sglite extension files, etc. were copied to
C:\Python22\Lib\site-packages\pymol. According to comment in
C:\Python22\Lib\site.py, a path configuration file must exist in the
\site-packages directory indicating which
> I have a Mac TI powerbook running OSX. Every time I launch a new
> terminal window, pymol launches. For example, if I open 3 terminal
> windows, 3 pymol sessions also start. How do I stop this?
What? You don't want PyMOL to launch every possible opportunity?
Actually, I've encountered this
Tina,
Did you do a full installation? After running:
python setup.py build install
python setup2.py
(in that order)
pymol.bat should just work. There shouldn't be any need to copy
anything over, nor should you set PYMOL_PATH -- that is all taken care
of automatically with this approach.
C
Hello,
So I figured that in my $PYMOL_PATH\build\lib.win32-2.2\pymol, there is a
_cmd.pyd that's missing in $PYMOL_PATH\modules\pymol. I copied it over, and
PyMOL started up, but said that it failed to import the xray module, which
however exists in $PYMOL_PATH\modules\pymol, so I don't understand
On 08/26/03 20:09:43, Malcolm Walker wrote:
You are missing libz (which is strange, since libpng depends on libz)
Oops, sorry. We fixed the problem.
Somehow libpng got built without linking to zlib. Odd.
Many thanks for your help.
Austin
--
Austin Acton Hon.B.Sc.
On 08/26/03 20:09:43, Malcolm Walker wrote:
You are missing libz (which is strange, since libpng depends on libz)
You may need the development package too (zlib1-devel)
[aus...@gamma373-165 austin]$ rpm -q zlib1
zlib1-1.1.4-8mdk
[aus...@gamma373-165 austin]$ rpm -q zlib1-devel
zlib1-devel-1.1.
