RE: [PyMOL] How do I auto-load my startup pymol script in the new os x version?

2003-09-07 Thread Warren L. DeLano
Hi Bill, This 0.91 OS X build is a new beast. I finally figured out how to successfully fuse a unix commmand-line application with a MacOS X application bundle, making life a whole lot easier. For one thing, there are no longer any environmental variables to edit and set -- the path is d

[PyMOL] How do I auto-load my startup pymol script in the new os x version?

2003-09-07 Thread William Scott
Hi folks: I just installed the new pymol 0.91 for os x. I used to start pymol this way: alias pymol "/Applications/PyMOL/Darwin/pymol.com -q /Users/wgscott/pymol/alias.pml" Now that option appears to be gone, so I tried alias pymol "open -a /Applications/PyMOL.app /Users/wgscott/pymol/al

RE: [PyMOL] "Filled" view for deoxyribose rings, bases in DNA ???

2003-09-07 Thread Warren L. DeLano
Raji, Sorry, PyMOL can't do that yet. However, since you are probably the 10th person to ask for this, so it has become high priority for a future version... Cheers, Warren -- mailto:war...@delanoscientific.com Warren L. DeLano, Ph.D. Principal Scientist DeLano Scientific LLC Voice (650

RE: [PyMOL] adding a new external GUI

2003-09-07 Thread Warren L. DeLano
Tina, You don't want to create a new thread -- Tcl/tk can only support a single thread. Instead, you either need to wholly replace the external GUI with your GUI, or you simply need to make your gui work with the standard external GUI. The latter is generally done by adding your own menu

[PyMOL] PyMOL for Mac G5, with Demos

2003-09-07 Thread Warren L. DeLano
PyMOLer's & Friends, For those of you considering a new PowerMac G5, a special "native" PyMOL v0.91 for the G5 with some nice demonstrations has been released: http://pymol.sf.net. This version contains an assortment of G5 optimizations, and the next release will have even more. Current