RE: [PyMOL] Restrict surface transparency to limited region

Roger, This isn’t possible right now. The only way to do it is to create two objects, surfacing different atoms in each object, and then enabling transparency in just one of the two objects. Cheers, Warren -- mailto:war...@delanoscientific.com Warren L. DeLano, Ph.D. Principal Scient

Re: [PyMOL] Select Atom & Change View

On Wednesday 14 January 2004 15:54, Douglas Kojetin wrote: > Is it possible to do the following through the command line ... > > --> select an atom (say the CA of residue 25) and bring the view of the > molecule within PyMOL so that 25.CA is 'up front' (or closest to the > viewer's point of view)?

[PyMOL] Select Atom & Change View

Hi All- Is it possible to do the following through the command line ... --> select an atom (say the CA of residue 25) and bring the view of the molecule within PyMOL so that 25.CA is 'up front' (or closest to the viewer's point of view)? Thanks for the input, Doug

[PyMOL] Restrict surface transparency to limited region

Dear PyMOL users/devs, I am trying to produce a figure with a molecular surface and would like to make this surface transparent only covering certain residues. I have tried creating a separate surface for these residues and the rest of the protein and setting transparency for the object coverin

Re: [PyMOL] pyopengl broken?

Did somebody (Warren?) look into this? Could anybody reproduce it (i.e. running examples/devel/gl01.py)? Or is this just a problem on Debian GNU/Linux? thanks, Michael This was the text of the bug report: --8<-- On Fri, Oct 03, 2003 at 11:53:53AM +0200, Gabor E. Tusnady wrote: > I would