[PyMOL] discrete helix

2006-08-21 Thread Zheng Yang
Dear Colleagues, I am using PyMOL to show a protein under a series motion. One pretty representation is the cartoon view. However, when the residues become farther and father away, the helix cartoon become discrete, although that structural domain is still a helix. So is there a parameter,

Re: [PyMOL] Paths to loaded objects

2006-08-21 Thread Michael Lerner
I think he means for you to have a Load button as part of your plugin. That button would first record the path to the file and then call through to cmd.load(). On 8/19/06, Ron Jacak r...@email.unc.edu wrote: Peter, I'm working on a plugin that reads information appended to the end of PDB

[PyMOL] kensington three button mouse in mac book pro-issue

2006-08-21 Thread Ramachandran Murali
Hi, I am using Kensington three-button mouse on a Mac book pro (17) laptop. In pymol, when i press the middle button (for translation), it switches to horizontal scroll. The translation function is not working! Has anyone experienced similar problem?. Any fix or work around? Thanks Murali

[PyMOL] pymol crashes - segmentation fault

2006-08-21 Thread Noel Faux
Hi all, Recently I finally managed to install the Nvidia driver (NVIDIA-Linux-x86-1.0-7182-pkg1) for the graphics card (Quadro2 Pro/AGP/SSE2) on my Fedora Core 5 box. When I try and run pymol it crashed after I load a pdb file and try and either right or left click on the main display. Here