Hi Toni,
I think the variable you want to set is "cartoon_transparency" not
"transparency". The way I figured this out was through the
menu->settings->Edit All... dialog box.
Matt
> Date: Tue, 22 Jan 2008 10:10:58 +0100
> From: " Toni Piz? "
> Subject: [PyMOL] Transparency in cartoons
> To:
> When i see the cartoon view, happens nothing, but if I use "show
> surface" the transparency is shown. Do you know how to do it in the
> cartoon view?
Toni,
Set the "cartoon_transparency", not just "transparency".
Here's the appropriate PyMOLWiki link:
http://www.pymolwiki.org/index.php/Cartoo
On Monday 21 January 2008 23:51:15 Toni Pizà wrote:
> > I'm not sure this is what you're asking, but I use scripts by typing:
> >
> > @script.pml
>
> Thanks for your response, but I'm asking how to pass arguments to
> pymol's scripts written in Python. I type "run nameOfScript.py" within
> pymol fo
On Tuesday 22 January 2008 10:10:58 Toni Pizà wrote:
> I'm trying to show some aminoacids transparent in a cartoon view. I
> use the command cmd.set("transparency", "0.8" ,"(resi " + values[0] +
> ":" + values[1] + ")").
>
> When i see the cartoon view, happens nothing, but if I use "show
> surface
Hello!
I'm trying to show some aminoacids transparent in a cartoon view. I
use the command cmd.set("transparency", "0.8" ,"(resi " + values[0] +
":" + values[1] + ")").
When i see the cartoon view, happens nothing, but if I use "show
surface" the transparency is shown. Do you know how to do it in
