Doug,
Rotate transforms atomic coordinates (relative to the precomputed field).
Try using "turn" to move the camera instead.
turn y,180
etc.
Cheers,
Warren
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-Original Message-
From: pymol-users-boun...@lis
Hi All,
I am having some problems with surface display of the output from the
APBS plugin distributed with PyMOL (version 1.1r0) using the "color by
potential on sol. acc. surf." option. Steps to reproduce the problem:
1. Load in a structure.
2. Perform the APBS calculation (execute "Set
Warren
Thanks for that. That's rather what I expected/feared.
I'd still be delighted to hear from anyone who may understand why Python
isn't working straight out of the box.
Best wishes
Daniel
On Tue, 2008-07-22 at 09:04 -0700, Warren DeLano wrote:
> Daniel,
>
> This kind of complexity illu
Warren
Thanks for the quick reply. I tried what you suggested but I get the
same error.
How can I check how the path has been configured? It seems as if there
is only one python so there shouldn't be scope for confusion; I can only
find one site.py, for example, in
/usr/lib/python2.5/site.py
Michael
Like I said, the problem is not pymol-specific; no modules can be found
even when explicitly pointing PYTHONHOME to them.
Pymol0.99 off the website works fine since it comes packaged with its
own python modules. The one I'd like to get to work is a 1.0rc2
obtained from synaptic. It loca
Daniel,
Any time you see the "import site failed" error from Python, you can infer that
there is a problem with the Python interpreter being unable to access its
required libraries. Messages after that aren't typically informative.
This usually a path configuration issue, but I think it can al
On Tue, Jul 22, 2008 at 03:38:53PM +0100, Daniel Rigden wrote:
> First let me confess that my problem does not just involved pymol.
> However, it is hampering my use of pymol amongst other things and there
> must be many python experts who read this list.
>
> My problem, on a completely fresh Ubun
Dear all
First let me confess that my problem does not just involved pymol.
However, it is hampering my use of pymol amongst other things and there
must be many python experts who read this list.
My problem, on a completely fresh Ubuntu 8.04 install, is that python
can find modules when asked to
