Hi all,
I coded a little plugin that performs what Horacio asked for:
It takes 2 selections with the same number of residues
calculates RMSD for the backbone atoms and assigns each backbone atom's
b-factor the corresponding RMSD. (assigns 0.0 to non-backbone atoms)
(It only work for aminoacidic sequences)
At this time I don't have any website to upload it, but I'll email it to
whoever drops me a line asking for it
Cheers,
Raul
> Hi,
>
> Given two very similar pdb structures, do you know if it is
> possible to
> colour them in relationship with the RMSD between the 2
> structures ? I
> mean that for instance the backbone is practically the same
> in both
> proteines, so it gets some same color in both, but for some
> chains which
> are different, the colors start to diferentiate in relation
> to the RMSD.
>
> Thanks in advance
>
> Horacio
>
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