[PyMOL] ZM-M220W and TRIMON ZM-M220W

2009-06-30 Thread Lihua Wang
Hi PyMOL users: I am looking into stereo 3D on LCD monitors. What is the difference between ZM-M220W and TRIMON ZM-M220W? http://accessories.us.dell.com/sna/products/Displays/productdetail.aspx?c=usl=ens=hiedcs=RC956904sku=A2550610 and

Re: [PyMOL] ZM-M220W and TRIMON ZM-M220W

2009-06-30 Thread Warren DeLano
The difference? $769.99 - $354.99 = $415 exactly. But seriously, this is a question for Dell, not pymol-users. For what it is worth, mid $300's is the current per-unit pricing for the ZM-M220W display - but they originally hit the market at a 2-3X higher price, so one of those links is

[PyMOL] Homology Modeling in Pymol

2009-06-30 Thread Buz Barstow
Hi All, I have a very large library (almost 1000) of similar genetic sequences, for which I would like to generate homology models. Does anyone know of a way to automate requests to a homology modeling server, such as SWISS-Model through pymol, or alternatively through python? Thanks!

Re: [PyMOL] Homology Modeling in Pymol

2009-06-30 Thread Nathaniel Echols
On Tue, Jun 30, 2009 at 2:24 PM, Buz Barstow b...@mac.com wrote: I have a very large library (almost 1000) of similar genetic sequences, for which I would like to generate homology models. Does anyone know of a way to automate requests to a homology modeling server, such as SWISS-Model

[PyMOL] Caver 2.0.003 plugin

2009-06-30 Thread Roger Rowlett
Has anyone got the Caver 2.0.003 plugin working in Ubuntu 9.04? I can install the plugin in pymol, load the example pdb (1MJ5) and open the dialog box, which seems to have the correct paths to the plugin .jar and lib directory. I can even select the correct starting point and have it displayed

Re: [PyMOL] homology modeling in python

2009-06-30 Thread Marcus Collins
Hi Buz (and everyone) The biopython package together with Bizkit (http://biskit.pasteur.fr/) claim to be able to do this sort of thing (see: http://biskit.pasteur.fr/use/workflows/homology-modelling) , and will chew up your processor rather than someone else's! Marcus Collins