Re: [PyMOL] "Model" pdb section support

2011-01-10 Thread Robert Campbell
Hello Sergey, On Mon, 10 Jan 2011 16:38:52 +0100 Sergey Ivanov wrote: > Have pdb file with pseudobeads: > MODEL 2 > HETATM1 O24.000 46.000 39.000 > HETATM2 O24.000 47.000 39.000 etc. I displayed this file using Nathan's suggestion to set all_

Re: [PyMOL] "Model" pdb section support

2011-01-10 Thread Michael Zimmermann
Dear Sergey, >From looking at your PDB file, I don't think PyMOL supports exactly what you want. I believe that in order for all_states to show atoms properly, they have to be in all of the states (all MODELs). So, you could do something like the following, but it feels a little clunky to me. A

Re: [PyMOL] "Model" pdb section support

2011-01-10 Thread Jason Vertrees
Hi Sergey, If I understand you correctly, you want the following: set all_states then load your file. Cheers, -- Jason On Mon, Jan 10, 2011 at 10:38 AM, Sergey Ivanov wrote: > Have pdb file with pseudobeads: > MODEL     2 > HETATM    1   O                24.000  46.000  39.000 > HETATM    2

[PyMOL] "Model" pdb section support

2011-01-10 Thread Sergey Ivanov
Have pdb file with pseudobeads: MODEL 2 HETATM1 O24.000 46.000 39.000 HETATM2 O24.000 47.000 39.000 HETATM3 O24.000 47.000 38.000 HETATM4 O25.000 47.000 38.000 HETATM5 O25.000