Hey Matthias,
for movie editing, you can use Adobe Premier, obviously. If you have an
older version of Photoshop lying around (pre-CS3), you can use the
bundled Image Ready for many simple movie-editing tasks. Avidemux also
helps you remove and change frames in movies. All three work on a
Holfelder!
I don't see your doubts. Your first point's a guess - and you're right
- and the second one a questions.
Before I answer, one warning: If you have 1 pdb files and numbering
starts at 1, the last one will be 1, not like you say. Be
aware of what you have.
for i in
Just a little bit of a further note on top of what Andreas said. If you are
doing all of the commands from a script you might want to cmd.disable() the
first molecule so that you can align to it, but not see it in the
animation. Then you can delete each molecule (after 1) after you've used
it.
Dear MfG, formerly known as Holfelder, here's an expanded script:
load x_1.pdb
zoom
#orient molecule at this point as you desire
ray
png x_1
disable x_1
for i in range (2,10001): \
cmd.load(x_%d.pdb %i) \
cmd.super(x_%d %i, x_1) \
cmd.ray() \
cmd.png(x_%05d %i) \
Hi Matthias,
there is 'mdelete', 'madd' and 'minsert'.
PyMOLmadd ?
Usage: madd [ specification [, frame [, freeze ]]]
PyMOLmdelete ?
Usage: mdelete [ count [, frame [, freeze [, object
PyMOLminsert ?
Usage: minsert count [, frame [, freeze [, object]]]
Cheers,
Thomas
Matthias Schmidt
