[PyMOL] alignment by residue

dear pymol users, i have a homodimer, with two identical monomers. i would like to know the rmsd of each residue in the first monomer with respect to each residue in the second monomer. i guess pair_fit should give the rmsd. is there a better command to look at the per residue rmsd. thank you.

Re: [PyMOL] about super_all.py Plugin installation.

Dear Pavan, On Tue, 27 Dec 2011 00:15:38 +0530, PAVAN PAYGHAN wrote: > Dear PyMol Users, > > I am using PyMol +v0.97 version on Windows XP .I have downloded > super_all.py > and tried to install the plugin by using install Plugi

Re: [PyMOL] about super_all.py Plugin installation.

You can try the "alignto" command as an alternative, if you want. JPK On Mon, Dec 26, 2011 at 12:45 PM, PAVAN PAYGHAN wrote: > Dear PyMol Users, > > I am using PyMol +v0.97 version on Windows XP .I have downloded > super_all.py  and tried to install the plugin by using install Plugin option > me

[PyMOL] about super_all.py Plugin installation.

Dear PyMol Users, I am using PyMol +v0.97 version on Windows XP .I have downloded super_all.py and tried to install the plugin by using install Plugin option menu. Then I got the message that the plugin was installed but after re-i

Re: [PyMOL] Problem with open source pymol

Thanks, Lina. It worked beautifully. On Wed, Dec 21, 2011 at 8:14 AM, lina wrote: > If you have fink, > > you can have an alternative way of installation. > > fink install pymol-py27 > > It works well. > > On Wed, Dec 21, 2011 at 4:19 AM, Lauren Porter > wrote: > > Pymol 1.3 is still available