[PyMOL] Convert PyMOL isomesh or isosurface to cgo?

2012-01-09 Thread James Davidson
Dear All, I wonder if anyone can point me in the right direction for converting an isomesh (eg representing electron density at a particular sigma level) to a cgo? I have looked around, but can't seem to find an example of this. Kind regards James

Re: [PyMOL] Convert PyMOL isomesh or isosurface to cgo?

2012-01-09 Thread Takanori Nakane
Dear James, I wonder if anyone can point me in the right direction for converting an isomesh (eg representing electron density at a particular sigma level) to a cgo? I have looked around, but can't seem to find an example of this. Undocumented function dump can dump coordinates of

[PyMOL] Mutagenesis and states

2012-01-09 Thread Justin Bailey
Hello I have been working with the pdb file 2C0W. It is a filamentous phage portion composed of 55 alpha helices, each within their own state. I am running into a few problems: 1) I'm wanting to add 4 amino acids to the middle of the alpha helix. I've been practicing my building skills by