[PyMOL] Problem with h_add hydrogens in sequence viewer

2013-03-26 Thread Matthew Baumgartner
Hi, When I fetch a new structure (1YCR, for example) then run 'h_add 1ycr' the hydrogens are added to the structure as expected, but they are put in the sequence viewer as their own residue with the same chain. This is problematic for several reasons, one is that it breaks selections, when I

Re: [PyMOL] Problem with h_add hydrogens in sequence viewer

2013-03-26 Thread Thomas Holder
Hi Matt, use the sort command after adding atoms: PyMOL h_add 1ycr PyMOL sort See also: http://pymolwiki.org/index.php/Sort Cheers, Thomas Matthew Baumgartner wrote, On 03/26/13 13:59: Hi, When I fetch a new structure (1YCR, for example) then run 'h_add 1ycr' the hydrogens are added to