Re: [PyMOL] PyMOL 1.6 pre-release announcement

Hi David, If you save a session file in the latest version of PyMOL there is never the expectation that prior versions can read that file. Such forward compatibility (of the older versions) is not supported. We do support, however, backward compatibility which is when newer versions of PyMOL read

Re: [PyMOL] Problems with Pymol v 1.6.0.0

Hi, Adding to thread. I'm using pymol 1.6 (built from svn yesterday) on Ubuntu 13.04. I've noticed that the selection indicators are not working properly. Steps to reproduce: #launch ignoring the config file pymol -k #in pymol fetch 1YCR Then open sequence viewer and select a range of

Re: [PyMOL] PyMOL 1.6 pre-release announcement

(yes, I meant forward compatibility there) Jason, in our 100+ PyMOL session files that we can now read into Jmol we have a few files that don't seem to have backward compatibility to PyMOL 1.3 from the open source version 1.6.0.0. Mostly it has to do with CGOs and measurements. Should I just send

Re: [PyMOL] PyMOL 1.6 pre-release announcement

Bob, Sure, feel free to send those to Thomas. Cheers, -- Jason On Thu, Jun 20, 2013 at 9:06 AM, Robert Hanson hans...@stolaf.edu wrote: (yes, I meant forward compatibility there) Jason, in our 100+ PyMOL session files that we can now read into Jmol we have a few files that don't seem to

[PyMOL] problem with distance

Hi, I've just purchased v1.6 and installed it under MacOS 10.6.8. I have a problem with using distance from a script, as well as via the wizard. my pdb has 12 chains. when I type: distance d1, molA and chain a and resi 53 and name o, molA and chain d and resi 8 and name n the distance is

Re: [PyMOL] problem with distance

Hi Vincent, we introduced dynamic_measures in PyMOL 1.4, which uses the atom ID and is not robust against duplicated IDs. So the workaround here is to switch dynamic_measures off: PyMOL unset dynamic_measures Hope that helps. Cheers, Thomas vincent Chaptal wrote, On 06/20/13 17:09: Hi,

Re: [PyMOL] Problems with Pymol v 1.6.0.0

Hi Matthew, thanks for the report. We fixed and pushed this to SVN today. Cheers, Thomas Matthew Baumgartner wrote, On 06/20/13 15:54: Hi, Adding to thread. I'm using pymol 1.6 (built from svn yesterday) on Ubuntu 13.04. I've noticed that the selection indicators are not working

Re: [PyMOL] Problems with Pymol v 1.6.0.0

Hi Stephen, Stephen P. Molnar wrote, On 06/18/13 15:16: Two minor, but annoying, problems with the new version in Debian 7.0 64 bit/ #1 The pull down menus in the graphics windows refuse to remain open when clicked, unless I left click and hold. Is this normal behavior? this is not normal