[PyMOL] How Pymol reads a dcd file

2013-07-11 Thread Syeda Hira Batool
Hello! I have psf and dcd files.I want to read them using my own script.So I want to know how PyMol reads dcd files.Can you please help me out in this regard by providing me some helping material or a script.  Thank you Hira Batool Student of BS-Bioinformatics Biosciences Department COMSATS

Re: [PyMOL] How Pymol reads a dcd file

2013-07-11 Thread Thomas Holder
Hi Syeda, PyMOL doesn't read PSF files, you need to provide the topology as PDB or any other format known to PyMOL. The DCD trajectory can be loaded with load_traj, after loading the topology: PyMOL load topology.pdb, somename PyMOL load_traj trajectory.dcd, somename, 1 See also: