Re: [PyMOL] sphere_scale help

2013-07-26 Thread Sampson, Jared
[Re-posting to the list because, as usual, I forgot to Reply All...] Hi Greg - If I understand correctly (and just on a quick visual inspection in PyMOL it looks like I'm at least close), the sphere_scale setting will scale the size of the sphere relative to the van der Waals radius of the atom

[PyMOL] sphere_scale help

2013-07-26 Thread Gregory Ryslik
Hi, I'm a fairly new user to PyMol and am having some trouble with the sphere_scale command. I understand that if I want to draw a sphere around the x'th ca atom, I can use: /show spheres, X/ca/ However, what if I want that sphere to have a radius of 3 angstroms, or 6 angstroms, etc.

Re: [PyMOL] importing openGL stream into Pymol

2013-07-26 Thread Thomas Holder
Hi Suhas, have you looked at pymol/examples/devel/gl03.py ? http://sourceforge.net/p/pymol/code/4037/tree/trunk/pymol/examples/devel/gl03.py Cheers, Thomas On Jul 26, 2013, at 11:21 AM, Narendra Suhas Jagannathan wrote: > Hello, > I am relatively new to PyMol. I understand that using a CG

[PyMOL] importing openGL stream into Pymol

2013-07-26 Thread Narendra Suhas Jagannathan
Hello, I am relatively new to PyMol. I understand that using a CGO helps import an OpenGL object into the Pymol GUI. But does anyone know if it is possible to integrate an OpenGL stream like say, glxgears into the Pymol viewer? Thanks Suhas