Re: [PyMOL] commands history

2013-11-10 Thread Justin Lecher
On 11/11/13 08:43, Folmer Fredslund wrote: > Dear Chandan, > > The command "log_open" will start writing a log file of events happening. > > If you want a specific name for the logfile you write "log_open myfile.pml" > > In that file the commands you type will be saved, as well as actions > from

Re: [PyMOL] commands history

2013-11-10 Thread Folmer Fredslund
Dear Chandan, The command "log_open" will start writing a log file of events happening. If you want a specific name for the logfile you write "log_open myfile.pml" In that file the commands you type will be saved, as well as actions from menus (not sure how many, but I think most of them). Hope

[PyMOL] commands history

2013-11-10 Thread Chandan Choudhury
Dear PyMOL users, I was just wandering to know that does PyMOL saves the history of the commands typed? If so, please let me know how can it be done. Chandan -- Chandan kumar Choudhury NCL, Pune INDIA -- November Webin

[PyMOL] Automatic mutation introduction

2013-11-10 Thread James Starlight
Dear PyMol users! I'm looking for the possible python script which using the pymol source would introduce selected mutations in the defined PDB file and produce PDB output containing such protein with the selected substitution residues. It would be also good if rotamers for mutation residues woul