[PyMOL] RMSD unit

2013-12-12 Thread Ahmet yıldırım
Dear users, What is the unit of RMSD in pymol? Nanometer or angstrom? PyMOLalign structure1 n. ca, structure2 n. ca -- Ahmet Yıldırım -- Rapidly troubleshoot problems before they affect your business. Most IT

Re: [PyMOL] unable to install pymol 1.6.0.0 on centos 5.10

2013-12-12 Thread Gincel
Hi thanks Pete, but I tried to install it with python 2.6.8 (the one I found on the net) and it still doesn't work (for any pymol version)... I eventually reinstalled a very old version (0.99) which is the only one working for now -- Edith Gincel

[PyMOL] how to define vectors between pseudoatoms

2013-12-12 Thread rainfieldcn
Hi All, I want to measure the angle between two lines in pymol. So I made two pseudoatoms on each line and want to define two vectors then measure the angle. How can I define this vector? Thanks! -- Rapidly troubleshoot