[PyMOL] how to remove incomplete residues from an atom selection?

2015-02-17 Thread Jose Borreguero
Dear pymol gurus, I am using find_buried_waters.py ( http://www.pymolwiki.org/index.php/Find_buried_waters) which returns a list of buried water atoms. I would like to discard from this selection those waters with some, but not all, of their atoms buried. I can't figure out how to do the

Re: [PyMOL] Chain Selection doesn't work (MacPymolEdu)

2015-02-17 Thread Thomas Holder
Hi Jared, Simon and all Edu PyMOL users, I don't think Python 3.x is involved here, the interpreter does know about reduce. However, inside list comprehension syntax, reduce is not known anymore (?). Edu MacPyMOL is linked against Python 2.5, which on OS X 10.10 is actually symlinked to Python

Re: [PyMOL] Chain Selection doesn't work (MacPymolEdu)

2015-02-17 Thread Sampson, Jared
Hi Simon - It looks like your default Python is now 3.x rather than 2.x. The built-in function reduce() was moved to functools.reduce() as of version 3.0. You can confirm whether this is the case via “python --version” on the command line. One solution might be to make 2.7 the default again,