Re: [PyMOL] Help Download structural alignment

Hi Clarisa, you can save an alignment using the create and save commands, e.g.: fetch 1oky 1t46, async=0 as ribbon align 1oky, 1t46 create aligned, all save aligned.pdb, aligned You can also save the alignment in clustalw format, see http://pymolwiki.org/index.php/Align. I hope this is what you

[PyMOL] Finding the surface residues using code

Dear Pymol users, I am using Pymol v 1.7.x. I want to obtain and show the surface residues in my protein. I found the following link: http://www.pymolwiki.org/index.php/FindSurfaceResidues#Usage How to run the code being in this link? Best, -