Re: [PyMOL] New plugin: PyMOLProbity

2017-01-17 Thread Maheshwaran.V
Wonderful work Jared... On Jan 18, 2017 3:58 AM, "Thomas Holder" wrote: > Great work Jared! > > Cheers, > Thomas > > On 17 Jan 2017, at 20:02, Albert wrote: > > > fantastic job!! > > > > Thanks a lot. > > > > Albert > > On 01/16/2017

Re: [PyMOL] New plugin: PyMOLProbity

2017-01-17 Thread Thomas Holder
Great work Jared! Cheers, Thomas On 17 Jan 2017, at 20:02, Albert wrote: > fantastic job!! > > Thanks a lot. > > Albert > On 01/16/2017 10:16 PM, Sampson, Jared M. wrote: >> Dear PyMOL Users, >> >> I am pleased to introduce a new plugin called PyMOLProbity which

Re: [PyMOL] New plugin: PyMOLProbity

2017-01-17 Thread Albert
fantastic job!! Thanks a lot. Albert On 01/16/2017 10:16 PM, Sampson, Jared M. wrote: Dear PyMOL Users, I am pleased to introduce a new plugin called PyMOLProbity which allows a PyMOL user to visualize MolProbity-style structural validation

Re: [PyMOL] making a plane

2017-01-17 Thread Tsjerk Wassenaar
Hi Vitaly, You have several options, but if the loops are nicely bent, the best is probably doing PCA on the coordinate sets of the loops and calculate the angle between the smallest eigenvectors. Is that enough information? Do you insist on drawing the planes? Cheers, Tsjerk On Jan 17, 2017

[PyMOL] making a plane

2017-01-17 Thread chemocev marker
Hi I am analyzing the dynamics of the loop and interested to define the loop as plane. Is there is a way in the pymol, if I can define the loop as plane and can measure the angle between these plane in different model?? Best J. Vitali