Re: [PyMOL] running pymol on zSpace (UNCLASSIFIED)

Hi Simon, zSpace support was never in any official PyMOL release (neither Open-Source nor Incentive PyMOL). The zSpace company had their own custom patched version of Open-Source PyMOL which they deployed to some customers. I don't know if they still support it. Cheers, Thomas > On Oct 25,

Re: [PyMOL] exporting/saving .obj and .mtl

Hi Verena, You're not doing anything wrong. Generation of .mtl output is not implemented. Of course saving an empty file is useless and confusing. We should remove the (non-functional) .mtl export and raise a warning if someone tries to save an .mtl file. Cheers, Thomas > On Oct 26, 2017,

Re: [PyMOL] how to iterate over residues with specific range of b-factors

Hi Li, Showing sticks: show sticks, b > 20 and b < 50 Iterating over residues: iterate byca (b > 20 and b < 50), print(resi) Cheers, Thomas > On Nov 1, 2017, at 6:18 PM, Li Xue wrote: > > Hello, > > I want to select residues with a specific range of b-factor values,

Re: [PyMOL] show dashes lines in cartoon to connect loops not resolved in structure

Hi Hari -  The `cartoon_gap_cutoff` setting does this.   https://pymolwiki.org/index.php/Cartoon_gap_cutoff Cheers, Jared On November 2, 2017 at 6:04:12 AM, hari jayaram (hari...@gmail.com) wrote: Hi , One of the features I like in Chimera is that breaks in the protein chain due to unresolved

[PyMOL] how to iterate over residues with specific range of b-factors

Hello, I want to select residues with a specific range of b-factor values, and show stricks for them. How can I use commands to do it? Many thanks. Li -- Li Xue, Ph.D. Computational Structural Biology group Utrecht University, Faculty of Science - Chemistry Email: l@uu.nl

[PyMOL] show dashes lines in cartoon to connect loops not resolved in structure

Hi , One of the features I like in Chimera is that breaks in the protein chain due to unresolved residues are indicated by dashes. Is there a plugin or built in feature that enables this in pymol. Thanks Hari -- Check out