Re: [PyMOL] Question about Pymol method / ESP rendering

2019-06-14 Thread Taka Seri
Hi Thomas, Thank you for your reply. I made the cube file by using psi4 which is one of quantum chemistry package. I will check the file. Kind regards, Taka 2019年6月11日(火) 19:40 Thomas Holder : > Hi Taka, > > Your ESP.cube file doesn't look like an electrostatic potential map, it > looks like

[PyMOL] "Qt not available, using GLUT/Tk interface" error

2019-06-14 Thread sunyeping via PyMOL-users
Dear all, I installed pymol according to guide at https://pymolwiki.org/index.php/Linux_Install. When I launched pymol, and get the "Qt not available, using GLUT/Tk interface" error and no pymol GUI appeared. How could I deal with this problem? Best

Re: [PyMOL] possible bug mouse coordinates

2019-06-14 Thread Thomas Holder
Hi Arnaud, This should be fixed now, see https://github.com/schrodinger/pymol-open-source/commit/af28e453c6 Cheers, Thomas > On Jun 13, 2019, at 5:46 PM, Thomas Holder > wrote: > > Hi Arnaud, > > I can reproduce both issues, at least with "sticks" representation. > Apparently PyMOL is

Re: [PyMOL] Advice on plugin creation

2019-06-14 Thread Thomas Holder
Hi Ed, The tutorial doesn't consider that the "dialog" variable must not go out of scope. It needs an additional reference to keep it alive, e.g. a global will work: dialog = None def run_plugin_gui(): from pymol.Qt import QtWidgets global dialog if dialog is None: dialog =