Hi Istvan,
The psico extension provides a "save_traj" command.
https://pymolwiki.org/index.php/save_traj
https://pymolwiki.org/index.php/psico
Cheers,
Thomas
On Mon, Dec 4, 2023 at 5:11 PM Istvan Kolossvary wrote:
>
> Hi, I was wondering, does Pymol have a way to save a trajectory directly
Thank you, Thomas! I was so hoping something like that exists. :) It is
about saving a movie and the associated coordinates with it for further
analysis.
Thanks again. Best,
Istvan
On Mon, Dec 4, 2023 at 2:28 PM Thomas Holder
wrote:
> Hi Istvan,
>
> The psico extension provides a
Hi.
I doubt it.
I also would say that mdanalysys or pytraj will be better for big
trajectories.
If trajectory is big, Pymol will struggle.
Petro.
On Mon, 4 Dec 2023, 17:06 Istvan Kolossvary, wrote:
> Hi, I was wondering, does Pymol have a way to save a trajectory directly
> in .dcd, .xtc, .gro,
Hi, I was wondering, does Pymol have a way to save a trajectory directly in
.dcd, .xtc, .gro, or some other popular file format?
Thanks for any suggestions,
Istvan
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