[PyMOL] undisplaying residues

2009-08-31 Thread Bala subramanian
Friends, I made a cartoon representation of a DNA. now i want to undisplay the base and sugar of certain residues in the DNA. Could someone please write me how to do the same. When i select a residue and choose HIDE- EVERYTHING. It undisplays the cartoon of the backbone also which i dnt want.

[PyMOL] creating arrows

2009-04-10 Thread Bala subramanian
Friends, I have to draw arrows through the phosphate atoms of my DNA, Is there any way that can make it in pymol. Kindly give me some suggestions if it is possible. Thanks, Bala

[PyMOL] how to resolve the error

2009-03-31 Thread Bala subramanian
Friends, Someone please write to me how to resolve the following error. OpenGL graphics engine: GL_VENDOR: Mesa Project GL_RENDERER: Software Rasterizer GL_VERSION: 1.4 (2.1 Mesa 7.3-devel) Traceback (most recent call last): File /usr/lib/python2.5/site-packages/pymol/__init__.py, line

[PyMOL] not getting pymol gui

2009-03-13 Thread Bala subramanian
Hai all, Few days back, i wrote a mail regarding the problem of not getting pymol gui while starting pymol. The folllowing are the errors it throws when i give pymol in command line. freeglut (pymol): Unable to create direct context rendering for window 'PyMOL Viewer' This may hurt performance.

[PyMOL] just started with pymol

2009-03-12 Thread Bala subramanian
Hello, Happy to join pymol community. I am using pymol in fedora10. When i give pymol, the pymol viewer opens but not the pymol tck/tk GUI. why is it so. Bala