Re: [PyMOL] list_hb.py

2021-04-08 Thread Evgeny Osipov
Hi Chen, you can use distance command or cmd.distance for scripting purposes. Just specify mode 2 in order to search for polar contacts: https://pymolwiki.org/index.php/Distance пн, 22 мар. 2021 г. в 18:53, Chen, Qiang : > Hi, Pymol Users, > > I used this script to find hydrogen-bond in protein,

Re: [PyMOL] Linux pymol issues

2018-11-28 Thread Evgeny Osipov
bash terminal that > would be: > > bash> export QT_SCALE_FACTOR=1 > bash> pymol > > See also: > http://doc.qt.io/qt-5/highdpi.html#high-dpi-support-in-qt > > Cheers, > Thomas > > > On Nov 27, 2018, at 7:50 PM, Evgeny Osipov wrote: > > > > De

[PyMOL] Linux pymol issues

2018-11-27 Thread Evgeny Osipov
Dear Pymol community, I stumbled upon strange GUI issue with Pymol 2 and Maestro on my linux laptop ( Xubuntu 18.04 HP Probook 440 G5): it looks like GUI elements have different scale so it looks rather strange and very inconvenient for work. Problem appears only at 1920x1080 resolution and every