[PyMOL] Drag a molecule from finder (mac os x) into an existing session

2009-03-28 Thread Horacio Sánchez
Hi, in mac os x i have an opened session and i wonder if it is possible to add a new molecule from finder, just dragging the molecule to the pymol interface. I tried and it does not work, and it is very annoying working on different directories and always giving the path for the different

[PyMOL] Get coordinates of the mesh

2008-10-02 Thread Horacio Sánchez
Hi, looking to the mesh representation of a protein in pymol, I wonder what could be the best/easiest method to get the cartesian coordinates of some arbitrary number of the points of the mesh at more or less regular (or arbitrary) intervals. The only thing that I can think now of is to

[PyMOL] RMSD and color between two very similar structures

2008-09-21 Thread Horacio Sánchez
Hi, Given two very similar pdb structures, do you know if it is possible to colour them in relationship with the RMSD between the 2 structures ? I mean that for instance the backbone is practically the same in both proteines, so it gets some same color in both, but for some chains which are