[PyMOL] labels

2004-02-11 Thread Jose Avalos
Dear all: What do I need to do avoid losing the labels when I ray trace? Thank you again Jose

RE: [PyMOL] Zoom in a movie

2004-02-05 Thread Jose Avalos
Sorry for the basic question, but I can't get the mdo command to work for my movie. If I use the example in the reference page: load test.pdb mset 1 mdo 1, turn x,5; turn y,5; mplay I get the following error: Error: invalid arguments for mdo command. I don't know what I am missin

[PyMOL] Zoom in a movie

2004-02-04 Thread Jose Avalos
Dear all, Is it possible to do a movie in which you start looking at the entire enzyme and then you zoom into the active site and finally alternate between different states? If so, can somebody please point me in the right direction? Thank you very much Jose Avalos

[PyMOL] Back of surface

2003-08-22 Thread Jose Avalos
Dear all: I would like to know how to keep the back of a surface (cut via the slab) dark rather than white (when using a wite background) once I ray trace the image. Thank you in advance Jose

[PyMOL] Delete Bonds

2003-08-18 Thread Jose Avalos
Hi I would like to know how can I break bonds that are wrongly drawn in pymol. I am only using a coordinate file with no connectivities. I know how to select the bond, but then I don't know how to delete the bond without deleting other correct bonds that involve one of the atoms in the incorrect b