[PyMOL] What is the font using in APBS plugin?

2014-11-09 Thread Ooker
Hello, everyone I would like to know the font of the number in the bar under the image of molecule created by using APBS plugin for PyMOL. This is an example image of that: http://www.pymolwiki.org/images/3/37/Apbs_ex.png Thank you so much. -- Ooker

Re: [PyMOL] How to show the surface border of a specific residue?

2014-07-24 Thread Ooker
Hi Jared, thanks for your efford. Just to add more information, if you have to do it many times, you'd better overlay the border by a script. You can use ImageMagick or GraphicMagick to do that. composite -gravity center overlay.png base.png base_with_border.png: See http://www.imagemagick.org/scr

[PyMOL] How to show the surface border of a specific residue?

2014-07-24 Thread Ooker
I have a potential map of a protein and I would like to have a border between a specific residue while the map keeps unchanged. I have thought about making a new object of the residue and tried to find a command similar to: set label_outline_color, black but I can't find one. Do you have any id

[PyMOL] Segmentation fault when using APBS Tool 2

2014-05-14 Thread Ooker
The newest version of PyMOL (1.7.1.3) solves this problem, just to announce you to know that. Thank you. -- "Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE Instantly run your Selenium tests across

[PyMOL] Segmentation fault when using APBS Tool 2

2014-05-07 Thread Ooker
Hi all, When I want to using the APBS Tool 2 to show the solvent accessible surface, pyMOL crashes and auto close, no matter the Solvent accessible surface and Color by potential on sol. acc. surf. are checked. The trace back is: Could not find pymol-generated.dx so searching for pymol- genera