Hi Thomas,
Thank you for your reply.
I made the cube file by using psi4 which is one of quantum chemistry
package.
I will check the file.

Kind regards,
Taka

2019年6月11日(火) 19:40 Thomas Holder <thomas.hol...@schrodinger.com>:

> Hi Taka,
>
> Your ESP.cube file doesn't look like an electrostatic potential map, it
> looks like electron density. You need two map files, one for the density,
> and one for the ESP.
>
> Cheers,
>   Thomas
>
> > On Jun 8, 2019, at 12:39 AM, Taka Seri <serit...@gmail.com> wrote:
> >
> > Dear Pymol users,
> > I am newbie of Pymol.
> > I have a question of coloring method. I would like to draw isosurface
> with ESP and would like to set color with ramp_new function.
> > Attached files are example.
> > When I load ESP file and type following command, I could get isosurface.
> > But I could get only blue colored surface after setting color with
> ramp_new function.
> >
> > > isosurface esp_surf, ESP, 0.2
> > > ramp_new color_map, ESP, [-0.1, 0.1]
> >
> > I read following url and it worked well.
> > https://pymolwiki.org/index.php/Ramp_New
> >
> > Is something wrong in my ESP file or approach? Any advice or suggestions
> will be greatly appreciated.
> >
> > Kind regards,
> >
> > Taka
> > <ESP.cube>_______________________________________________
> > PyMOL-users mailing list
> > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
> > Unsubscribe:
> https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
>
> --
> Thomas Holder
> PyMOL Principal Developer
> Schrödinger, Inc.
>
>
_______________________________________________
PyMOL-users mailing list
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Unsubscribe: 
https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe

Reply via email to