The problem is solved changing the path of chempy from this file :
/usr/lib/python2.7/dist-packages/chempy/fragments/__init__.py
In that file I change the line:
path = chempy.path + 'fragments/'
for this line:
path = '/usr/share/pymol/data/chempy/fragments/'
And that works, cheers.
Hi,
Running PyMOL from this python script:
import __main__
__main__.pymol_argv = ['pymol','-qc']
import pymol
from pymol import cmd, stored
pymol.finish_launching()
cmd.fab('BCSDZ', 'pose', resi=0, ss=2)
I get this error message:
Error: unable to load fragment 'ace'.
Traceback (most recent
