Re: [PyMOL] Ca-only and surfaces

2005-08-18 Thread Bronwyn Carlisle
Yes, I know the move command, but my mouse USED to translate things when you clicked the scroll wheel, it just doesn't since I had to re- install things. I like using it rather than the command line. Bronwyn On 18/08/2005, at 8:14 AM, Peter Adrian Meyer wrote: Hi Bronwyn, a) I've just

Re: [PyMOL] Ca-only and surfaces

2005-08-18 Thread lieven
On Wednesday 17 August 2005 05:44, Bronwyn Carlisle wrote: > b)I'm trying to make a surface and a cartoon of a CA-only structure. > A search of my email archive tells me that by now Pymol should be > able to create at least a ribbon from this sort of file, but I can't > figure out how to do it. Ca

Re: [PyMOL] Ca-only and surfaces

2005-08-18 Thread Tsjerk Wassenaar
Hi Bronwyn, Don't know about MacPymol, but with regards to the second issue, a C-alpha trace, you can do it with: set cartoon_trace,1 show cartoon The surface will be tougher, you could play with setting the vanderwaals radius: show surface alter (all),vdw=4 rebuild And you can repeat the last

[PyMOL] Ca-only and surfaces

2005-08-16 Thread Bronwyn Carlisle
Hi, A couple of things: a) I've just installed the latest MacPymol (after having a major crash and having to re-install EVERYTHING), and my middle mouse button doesn't seem to work. I can't move things around on the screen. The other buttons work fine, and the middle one scrolls OK, so I