Hi Emilia,
On 03 Jun 2016, at 18:39, Emilia C. Arturo (Emily) wrote:
> Thank you for the reply, Thomas. I have a few items in reply:
>
> 1) I have not yet tried to change the refinement settings, but (for
> educational purposes, if nothing else) I would like to know what it is that
> this par
Thank you for the reply, Thomas. I have a few items in reply:
1) I have not yet tried to change the refinement settings, but (for
educational purposes, if nothing else) I would like to know what it is that
this particular command that you typed, does: PyMOL> refine(5, "mout",
sculpt_field_mask=(0x
Hi Emily,
PyMOL's morphing performs two steps: (1) RigiMOL, and (2) refinement of
non-backbone atoms by sculpting. The second part can be skipped with
"refinement=0".
Unfortunately, there is no RigiMOL publication or method documentation.
The sculpting refinement tries to avoid clashes and mai
Hello.
I would like to know more about the type of interpolation that is done when
morph is called, and what calculations are done at each refinement cycle.
Is there a literature reference or previous forum discussion to which you
can point me?
>From my sifting through the internet, I settled on
Hello.
I would like to know more about the type of interpolation that is done when
morph is called, and what calculations are done at each refinement cycle.
Is there a reference or previous forum discussion to which you can point me?
I am using MacPyMOL version 1.7.6.2.
Regards,
Emily.
--
"St
